RNA–Protein interactions for RNA: ENST00000337682.8

FAM60A-201, Transcript of Protein FAM60A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM60A, Length 3,163 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM60A-201ENST00000337682 ZNF606Q8WXB4 792 aa11.3□□□□□ -0.6
FAM60A-201ENST00000337682 PCDHB18PQ96TA0 734 aa11.3□□□□□ -0.6
FAM60A-201ENST00000337682 MTIF3Q9H2K0 278 aaKnown RBP11.3□□□□□ -0.6
FAM60A-201ENST00000337682 ARHGEF37A1IGU5 675 aa11.3□□□□□ -0.6
FAM60A-201ENST00000337682 TRAPPC3O43617 180 aa11.3□□□□□ -0.6
FAM60A-201ENST00000337682 ATP2A2P16615 1042 aaKnown RBP11.3□□□□□ -0.6
FAM60A-201ENST00000337682 TYMPP19971 482 aa11.3□□□□□ -0.6
FAM60A-201ENST00000337682 LHX1P48742 406 aa11.3□□□□□ -0.6
FAM60A-201ENST00000337682 ALDH7A1P49419 539 aaKnown RBP11.3□□□□□ -0.6
FAM60A-201ENST00000337682 SPOUT1Q5T280 376 aaKnown RBP11.3□□□□□ -0.6
FAM60A-201ENST00000337682 ACOT1Q86TX2 421 aa11.3□□□□□ -0.6
FAM60A-201ENST00000337682 ZSCAN30Q86W11 494 aa11.3□□□□□ -0.6
FAM60A-201ENST00000337682 HEXIM2Q96MH2 286 aaKnown RBP11.3□□□□□ -0.6
FAM60A-201ENST00000337682 SEPT11Q9NVA2 429 aaKnown RBP11.3□□□□□ -0.6
FAM60A-201ENST00000337682 DDX43Q9NXZ2 648 aaKnown RBP11.3□□□□□ -0.6
FAM60A-201ENST00000337682 CFHP08603 1231 aa11.3□□□□□ -0.6
FAM60A-201ENST00000337682 PDGFRBP09619 1106 aa11.3□□□□□ -0.6
FAM60A-201ENST00000337682 VDRP11473 427 aa11.3□□□□□ -0.6
FAM60A-201ENST00000337682 CD19P15391 556 aa11.3□□□□□ -0.6
FAM60A-201ENST00000337682 CYP27A1Q02318 531 aa11.3□□□□□ -0.6
FAM60A-201ENST00000337682 C9orf50Q5SZB4 431 aa11.3□□□□□ -0.6
FAM60A-201ENST00000337682 FUT10Q6P4F1 479 aa11.3□□□□□ -0.6
FAM60A-201ENST00000337682 KCNT2Q6UVM3 1135 aa11.3□□□□□ -0.6
FAM60A-201ENST00000337682 METTL23Q86XA0 190 aa11.3□□□□□ -0.6
FAM60A-201ENST00000337682 CRYBG2Q8N1P7 616 aa11.3□□□□□ -0.6
FAM60A-201ENST00000337682 COLGALT1Q8NBJ5 622 aa11.3□□□□□ -0.6
FAM60A-201ENST00000337682 RTP3Q9BQQ7 232 aa11.3□□□□□ -0.6
FAM60A-201ENST00000337682 ZBED2Q9BTP6 218 aa11.3□□□□□ -0.6
FAM60A-201ENST00000337682 NAGPAQ9UK23 515 aa11.3□□□□□ -0.6
FAM60A-201ENST00000337682 INSL6Q9Y581 213 aa11.3□□□□□ -0.6
FAM60A-201ENST00000337682 SF3B1O75533 1304 aaKnown RBP eCLIP11.3□□□□□ -0.64e-6■■■■■ 73.6
FAM60A-201ENST00000337682 SYN3O14994 580 aa11.29□□□□□ -0.6
FAM60A-201ENST00000337682 EFEMP2O95967 443 aa11.29□□□□□ -0.6
FAM60A-201ENST00000337682 CCDC175P0C221 793 aa11.29□□□□□ -0.6
FAM60A-201ENST00000337682 LAG3P18627 525 aa11.29□□□□□ -0.6
FAM60A-201ENST00000337682 TKTP29401 623 aaKnown RBP11.29□□□□□ -0.6
FAM60A-201ENST00000337682 SSTR3P32745 418 aaPredicted RBP11.29□□□□□ -0.6
FAM60A-201ENST00000337682 SPA17Q15506 151 aa11.29□□□□□ -0.6
FAM60A-201ENST00000337682 KIAA0319Q5VV43 1072 aa11.29□□□□□ -0.6
FAM60A-201ENST00000337682 C12orf29Q8N999 325 aa11.29□□□□□ -0.6
FAM60A-201ENST00000337682 SP7Q8TDD2 431 aaPredicted RBP11.29□□□□□ -0.6
FAM60A-201ENST00000337682 ZNF558Q96NG5 402 aa11.29□□□□□ -0.6
FAM60A-201ENST00000337682 GPR62Q9BZJ7 368 aa11.29□□□□□ -0.6
FAM60A-201ENST00000337682 KIAA1257Q9ULG3 409 aa11.29□□□□□ -0.6
FAM60A-201ENST00000337682 PCDHGC3Q9UN70 934 aa11.29□□□□□ -0.6
FAM60A-201ENST00000337682 PPP2R2CQ9Y2T4 447 aa11.29□□□□□ -0.6
FAM60A-201ENST00000337682 MED7O43513 233 aa11.29□□□□□ -0.6
FAM60A-201ENST00000337682 IPO7O95373 1038 aaKnown RBP11.29□□□□□ -0.6
FAM60A-201ENST00000337682 ACAT1P24752 427 aaKnown RBP11.29□□□□□ -0.6
FAM60A-201ENST00000337682 SGO2Q562F6 1265 aa11.29□□□□□ -0.6
FAM60A-201ENST00000337682 C17orf53Q8N3J3 647 aaPredicted RBP11.29□□□□□ -0.6
FAM60A-201ENST00000337682 IGSF21Q96ID5 467 aa11.29□□□□□ -0.6
FAM60A-201ENST00000337682 RAD9AQ99638 391 aa11.29□□□□□ -0.6
FAM60A-201ENST00000337682 LPIN3Q9BQK8 851 aa11.29□□□□□ -0.6
FAM60A-201ENST00000337682 KCND1Q9NSA2 647 aa11.29□□□□□ -0.6
FAM60A-201ENST00000337682 GBF1Q92538 1859 aa11.29□□□□□ -0.6
FAM60A-201ENST00000337682 CYP1A1P04798 512 aaPredicted RBP11.28□□□□□ -0.6
FAM60A-201ENST00000337682 LINC00271P0C7V0 271 aa11.28□□□□□ -0.6
FAM60A-201ENST00000337682 FGFR3P22607 806 aa11.28□□□□□ -0.6
FAM60A-201ENST00000337682 PSMC1P62191 440 aaKnown RBP11.28□□□□□ -0.6
FAM60A-201ENST00000337682 KRT83P78385 493 aa11.28□□□□□ -0.6
FAM60A-201ENST00000337682 CCDC122Q5T0U0 273 aa11.28□□□□□ -0.6
FAM60A-201ENST00000337682 FAM171A1Q5VUB5 890 aa11.28□□□□□ -0.6
FAM60A-201ENST00000337682 OVOS1Q6IE37 1185 aa11.28□□□□□ -0.6
FAM60A-201ENST00000337682 ALKBH5Q6P6C2 394 aaKnown RBP11.28□□□□□ -0.6
FAM60A-201ENST00000337682 SLC39A11Q8N1S5 342 aa11.28□□□□□ -0.6
FAM60A-201ENST00000337682 B3GALNT2Q8NCR0 500 aa11.28□□□□□ -0.6
FAM60A-201ENST00000337682 TNIP3Q96KP6 325 aa11.28□□□□□ -0.6
FAM60A-201ENST00000337682 DNAI2Q9GZS0 605 aa11.28□□□□□ -0.6
FAM60A-201ENST00000337682 TAS2R14Q9NYV8 317 aa11.28□□□□□ -0.6
FAM60A-201ENST00000337682 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.28□□□□□ -0.6
FAM60A-201ENST00000337682 PCDHA13Q9Y5I0 950 aa11.28□□□□□ -0.6
FAM60A-201ENST00000337682 NLRC5Q86WI3 1866 aa11.28□□□□□ -0.6
FAM60A-201ENST00000337682 USP27XA6NNY8 438 aa11.28□□□□□ -0.6
FAM60A-201ENST00000337682 O00370 1275 aa11.28□□□□□ -0.6
FAM60A-201ENST00000337682 TLL1O43897 1013 aa11.28□□□□□ -0.6
FAM60A-201ENST00000337682 ATP2C2O75185 946 aa11.28□□□□□ -0.6
FAM60A-201ENST00000337682 YWHAHQ04917 246 aaPredicted RBP11.28□□□□□ -0.6
FAM60A-201ENST00000337682 ELAVL2Q12926 359 aaKnown RBP11.28□□□□□ -0.6
FAM60A-201ENST00000337682 CLEC16AQ2KHT3 1053 aa11.28□□□□□ -0.6
FAM60A-201ENST00000337682 TRIM72Q6ZMU5 477 aa11.28□□□□□ -0.6
FAM60A-201ENST00000337682 PASD1Q8IV76 773 aa11.28□□□□□ -0.6
FAM60A-201ENST00000337682 CCAR2Q8N163 923 aaKnown RBP11.28□□□□□ -0.6
FAM60A-201ENST00000337682 FIBCD1Q8N539 461 aa11.28□□□□□ -0.6
FAM60A-201ENST00000337682 VN1R3Q9BXE9 311 aa11.28□□□□□ -0.6
FAM60A-201ENST00000337682 CDH9Q9ULB4 789 aa11.28□□□□□ -0.6
FAM60A-201ENST00000337682 A0A0U1RQJ8 604 aa11.28□□□□□ -0.6
FAM60A-201ENST00000337682 CARNS1A5YM72 827 aa11.28□□□□□ -0.6
FAM60A-201ENST00000337682 UNGP13051 313 aaPredicted RBP11.28□□□□□ -0.6
FAM60A-201ENST00000337682 PTPN1P18031 435 aaKnown RBP11.28□□□□□ -0.6
FAM60A-201ENST00000337682 PCSK1P29120 753 aa11.28□□□□□ -0.6
FAM60A-201ENST00000337682 SHHQ15465 462 aa11.28□□□□□ -0.6
FAM60A-201ENST00000337682 CNGA2Q16280 664 aa11.28□□□□□ -0.6
FAM60A-201ENST00000337682 PPP1R26Q5T8A7 1209 aaPredicted RBP11.28□□□□□ -0.6
FAM60A-201ENST00000337682 ARHGAP17Q68EM7 881 aa11.28□□□□□ -0.6
FAM60A-201ENST00000337682 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.28□□□□□ -0.6
FAM60A-201ENST00000337682 DNAAF5Q86Y56 855 aa11.28□□□□□ -0.6
FAM60A-201ENST00000337682 RNF168Q8IYW5 571 aaPredicted RBP11.28□□□□□ -0.6
FAM60A-201ENST00000337682 ATRIPQ8WXE1 791 aa11.28□□□□□ -0.6
FAM60A-201ENST00000337682 CYFIP2Q96F07 1278 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms