RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 RNF214Q8ND24 703 aa16.42■□□□□ 0.22
SEC13-201ENST00000337354 ELMO3Q96BJ8 720 aa16.42■□□□□ 0.22
SEC13-201ENST00000337354 TNIP3Q96KP6 325 aa16.42■□□□□ 0.22
SEC13-201ENST00000337354 RTP3Q9BQQ7 232 aa16.42■□□□□ 0.22
SEC13-201ENST00000337354 SDCBP2Q9H190 292 aa16.42■□□□□ 0.22
SEC13-201ENST00000337354 PLEKHA4Q9H4M7 779 aa16.42■□□□□ 0.22
SEC13-201ENST00000337354 SMYD3Q9H7B4 428 aa16.42■□□□□ 0.22
SEC13-201ENST00000337354 PRDM6Q9NQX0 595 aa16.42■□□□□ 0.22
SEC13-201ENST00000337354 APEX2Q9UBZ4 518 aa16.42■□□□□ 0.22
SEC13-201ENST00000337354 DAAM1Q9Y4D1 1078 aa16.42■□□□□ 0.22
SEC13-201ENST00000337354 ANK1P16157 1881 aa16.42■□□□□ 0.22
SEC13-201ENST00000337354 EYSQ5T1H1 3165 aa16.42■□□□□ 0.22
SEC13-201ENST00000337354 A0A1B0GTH6 734 aa16.41■□□□□ 0.22
SEC13-201ENST00000337354 ADAM12O43184 909 aa16.41■□□□□ 0.22
SEC13-201ENST00000337354 TGM5O43548 720 aa16.41■□□□□ 0.22
SEC13-201ENST00000337354 GLUD1P00367 558 aa16.41■□□□□ 0.22
SEC13-201ENST00000337354 CPB1P15086 417 aa16.41■□□□□ 0.22
SEC13-201ENST00000337354 ATF2P15336 505 aa16.41■□□□□ 0.22
SEC13-201ENST00000337354 RFX1P22670 979 aa16.41■□□□□ 0.22
SEC13-201ENST00000337354 LMO2P25791 158 aa16.41■□□□□ 0.22
SEC13-201ENST00000337354 MFAP3P55082 362 aa16.41■□□□□ 0.22
SEC13-201ENST00000337354 FANCCQ00597 558 aa16.41■□□□□ 0.22
SEC13-201ENST00000337354 KCNC3Q14003 757 aa16.41■□□□□ 0.22
SEC13-201ENST00000337354 NR1I3Q14994 352 aa16.41■□□□□ 0.22
SEC13-201ENST00000337354 NFE2Q16621 373 aaPredicted RBP16.41■□□□□ 0.22
SEC13-201ENST00000337354 INTS6LQ5JSJ4 861 aaKnown RBP16.41■□□□□ 0.22
SEC13-201ENST00000337354 SCARA5Q6ZMJ2 495 aa16.41■□□□□ 0.22
SEC13-201ENST00000337354 OSTM1Q86WC4 334 aa16.41■□□□□ 0.22
SEC13-201ENST00000337354 PALB2Q86YC2 1186 aa16.41■□□□□ 0.22
SEC13-201ENST00000337354 CRYBG2Q8N1P7 616 aa16.41■□□□□ 0.22
SEC13-201ENST00000337354 OR10T2Q8NGX3 314 aa16.41■□□□□ 0.22
SEC13-201ENST00000337354 C2orf15Q8WU43 125 aaKnown RBP16.41■□□□□ 0.22
SEC13-201ENST00000337354 SLC22A17Q8WUG5 538 aa16.41■□□□□ 0.22
SEC13-201ENST00000337354 ERGIC2Q96RQ1 377 aa16.41■□□□□ 0.22
SEC13-201ENST00000337354 UBE2TQ9NPD8 197 aaPredicted RBP16.41■□□□□ 0.22
SEC13-201ENST00000337354 PLCB1Q9NQ66 1216 aa16.41■□□□□ 0.22
SEC13-201ENST00000337354 CISHQ9NSE2 258 aa16.41■□□□□ 0.22
SEC13-201ENST00000337354 THEGQ9P2T0 379 aa16.41■□□□□ 0.22
SEC13-201ENST00000337354 HSFX1Q9UBD0 423 aa16.41■□□□□ 0.22
SEC13-201ENST00000337354 AFF4Q9UHB7 1163 aaKnown RBP16.41■□□□□ 0.22
SEC13-201ENST00000337354 HCFC2Q9Y5Z7 792 aa16.41■□□□□ 0.22
SEC13-201ENST00000337354 WDR27A2RRH5 827 aa16.4■□□□□ 0.22
SEC13-201ENST00000337354 CILPO75339 1184 aa16.4■□□□□ 0.22
SEC13-201ENST00000337354 PDGFRBP09619 1106 aa16.4■□□□□ 0.22
SEC13-201ENST00000337354 ARPP19P56211 112 aa16.4■□□□□ 0.22
SEC13-201ENST00000337354 UBASH3AP57075 661 aa16.4■□□□□ 0.22
SEC13-201ENST00000337354 ADAM15Q13444 863 aa16.4■□□□□ 0.22
SEC13-201ENST00000337354 COL19A1Q14993 1142 aa16.4■□□□□ 0.22
SEC13-201ENST00000337354 UVSSAQ2YD98 709 aa16.4■□□□□ 0.22
SEC13-201ENST00000337354 FAM171BQ6P995 826 aa16.4■□□□□ 0.22
SEC13-201ENST00000337354 RRAGAQ7L523 313 aa16.4■□□□□ 0.22
SEC13-201ENST00000337354 GLYCTKQ8IVS8 523 aa16.4■□□□□ 0.22
SEC13-201ENST00000337354 CASP10Q92851 521 aa16.4■□□□□ 0.22
SEC13-201ENST00000337354 SYT15Q9BQS2 421 aa16.4■□□□□ 0.22
SEC13-201ENST00000337354 NT5C1AQ9BXI3 368 aa16.4■□□□□ 0.22
SEC13-201ENST00000337354 IGFLR1Q9H665 355 aa16.4■□□□□ 0.22
SEC13-201ENST00000337354 PDCD11Q14690 1871 aaKnown RBP16.4■□□□□ 0.22
SEC13-201ENST00000337354 TRIP11Q15643 1979 aa16.4■□□□□ 0.22
SEC13-201ENST00000337354 A0A1W2PQC6 194 aa16.39■□□□□ 0.21
SEC13-201ENST00000337354 TPM3P06753 285 aa16.39■□□□□ 0.21
SEC13-201ENST00000337354 PTPN1P18031 435 aaKnown RBP16.39■□□□□ 0.21
SEC13-201ENST00000337354 ELF1P32519 619 aa16.39■□□□□ 0.21
SEC13-201ENST00000337354 RAP1GAPP47736 663 aa16.39■□□□□ 0.21
SEC13-201ENST00000337354 NDST1P52848 882 aa16.39■□□□□ 0.21
SEC13-201ENST00000337354 SYCP1Q15431 976 aa16.39■□□□□ 0.21
SEC13-201ENST00000337354 CTC1Q2NKJ3 1217 aa16.39■□□□□ 0.21
SEC13-201ENST00000337354 KLHDC7AQ5VTJ3 777 aa16.39■□□□□ 0.21
SEC13-201ENST00000337354 LRRTM3Q86VH5 581 aa16.39■□□□□ 0.21
SEC13-201ENST00000337354 ARHGEF19Q8IW93 802 aa16.39■□□□□ 0.21
SEC13-201ENST00000337354 MYCBPAPQ8TBZ2 947 aa16.39■□□□□ 0.21
SEC13-201ENST00000337354 PABPC5Q96DU9 382 aaKnown RBP16.39■□□□□ 0.21
SEC13-201ENST00000337354 NAP1L5Q96NT1 182 aaPredicted RBP16.39■□□□□ 0.21
SEC13-201ENST00000337354 GTF3C4Q9UKN8 822 aa16.39■□□□□ 0.21
SEC13-201ENST00000337354 MYO7AQ13402 2215 aa16.39■□□□□ 0.21
SEC13-201ENST00000337354 CD58P19256 250 aa16.38■□□□□ 0.21
SEC13-201ENST00000337354 ACAT1P24752 427 aaKnown RBP16.38■□□□□ 0.21
SEC13-201ENST00000337354 SLC39A12Q504Y0 691 aa16.38■□□□□ 0.21
SEC13-201ENST00000337354 DPY19L2P1Q6NXN4 242 aa16.38■□□□□ 0.21
SEC13-201ENST00000337354 RNF19BQ6ZMZ0 732 aa16.38■□□□□ 0.21
SEC13-201ENST00000337354 C4orf50Q6ZRC1 276 aa16.38■□□□□ 0.21
SEC13-201ENST00000337354 CCDC149Q6ZUS6 474 aa16.38■□□□□ 0.21
SEC13-201ENST00000337354 GAS2L3Q86XJ1 694 aa16.38■□□□□ 0.21
SEC13-201ENST00000337354 TCEAL8Q8IYN2 117 aa16.38■□□□□ 0.21
SEC13-201ENST00000337354 B3GALNT2Q8NCR0 500 aa16.38■□□□□ 0.21
SEC13-201ENST00000337354 KREMEN2Q8NCW0 462 aa16.38■□□□□ 0.21
SEC13-201ENST00000337354 SPPL2BQ8TCT7 592 aa16.38■□□□□ 0.21
SEC13-201ENST00000337354 WHAMMQ8TF30 809 aa16.38■□□□□ 0.21
SEC13-201ENST00000337354 TMEM176AQ96HP8 235 aa16.38■□□□□ 0.21
SEC13-201ENST00000337354 FUBP3Q96I24 572 aaKnown RBP eCLIP16.38■□□□□ 0.21
SEC13-201ENST00000337354 PCMTD1Q96MG8 357 aaPredicted RBP16.38■□□□□ 0.21
SEC13-201ENST00000337354 TMEM209Q96SK2 561 aa16.38■□□□□ 0.21
SEC13-201ENST00000337354 PKMYT1Q99640 499 aa16.38■□□□□ 0.21
SEC13-201ENST00000337354 ARID3AQ99856 593 aa16.38■□□□□ 0.21
SEC13-201ENST00000337354 RBSNQ9H1K0 784 aa16.38■□□□□ 0.21
SEC13-201ENST00000337354 ABCB6Q9NP58 842 aa16.38■□□□□ 0.21
SEC13-201ENST00000337354 SIX2Q9NPC8 291 aa16.38■□□□□ 0.21
SEC13-201ENST00000337354 DZANK1Q9NVP4 752 aa16.38■□□□□ 0.21
SEC13-201ENST00000337354 FBXW11Q9UKB1 542 aa16.38■□□□□ 0.21
SEC13-201ENST00000337354 DNAJC12Q9UKB3 198 aa16.38■□□□□ 0.21
SEC13-201ENST00000337354 KIAA1257Q9ULG3 409 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms