RNA–Protein interactions for RNA: ENST00000337339.6

MSL3-202, Transcript of MSL complex subunit 3, humanhuman

TSL 2 BASIC

Gene MSL3, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-202ENST00000337339 FAM49AQ9H0Q0 323 aaPredicted RBP10.25□□□□□ -0.77
MSL3-202ENST00000337339 ALG13Q9NP73 1137 aaKnown RBP10.25□□□□□ -0.77
MSL3-202ENST00000337339 METTL5Q9NRN9 209 aaKnown RBP10.25□□□□□ -0.77
MSL3-202ENST00000337339 SNCAIPQ9Y6H5 919 aa10.25□□□□□ -0.77
MSL3-202ENST00000337339 CNTNAP2Q9UHC6 1331 aa10.25□□□□□ -0.77
MSL3-202ENST00000337339 A0A087WZ62 844 aa10.25□□□□□ -0.77
MSL3-202ENST00000337339 F5H423 210 aaPredicted RBP10.25□□□□□ -0.77
MSL3-202ENST00000337339 M0QYV0 167 aa10.25□□□□□ -0.77
MSL3-202ENST00000337339 PECAM1P16284 738 aaPredicted RBP10.25□□□□□ -0.77
MSL3-202ENST00000337339 MMP8P22894 467 aa10.25□□□□□ -0.77
MSL3-202ENST00000337339 ATP5DP30049 168 aa10.25□□□□□ -0.77
MSL3-202ENST00000337339 SMAD1Q15797 465 aaKnown RBP10.25□□□□□ -0.77
MSL3-202ENST00000337339 CCNG2Q16589 344 aa10.25□□□□□ -0.77
MSL3-202ENST00000337339 IER5Q5VY09 327 aa10.25□□□□□ -0.77
MSL3-202ENST00000337339 OR6B2Q6IFH4 312 aa10.25□□□□□ -0.77
MSL3-202ENST00000337339 CROCCP2Q86T23 111 aa10.25□□□□□ -0.77
MSL3-202ENST00000337339 SESTD1Q86VW0 696 aa10.25□□□□□ -0.77
MSL3-202ENST00000337339 EXD1Q8NHP7 514 aa10.25□□□□□ -0.77
MSL3-202ENST00000337339 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.25□□□□□ -0.77
MSL3-202ENST00000337339 JOSD2Q8TAC2 188 aa10.25□□□□□ -0.77
MSL3-202ENST00000337339 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.25□□□□□ -0.77
MSL3-202ENST00000337339 TGS1Q96RS0 853 aaKnown RBP10.25□□□□□ -0.77
MSL3-202ENST00000337339 ACO2Q99798 780 aaKnown RBP10.25□□□□□ -0.77
MSL3-202ENST00000337339 FDXACB1Q9BRP7 624 aaPredicted RBP10.25□□□□□ -0.77
MSL3-202ENST00000337339 MINDY3Q9H8M7 445 aa10.25□□□□□ -0.77
MSL3-202ENST00000337339 EFCC1Q9HA90 598 aa10.25□□□□□ -0.77
MSL3-202ENST00000337339 ZNF112Q9UJU3 913 aa10.25□□□□□ -0.77
MSL3-202ENST00000337339 PSTPIP1O43586 416 aa10.24□□□□□ -0.77
MSL3-202ENST00000337339 MSCO60682 206 aa10.24□□□□□ -0.77
MSL3-202ENST00000337339 MAFO75444 373 aaPredicted RBP10.24□□□□□ -0.77
MSL3-202ENST00000337339 NFICP08651 508 aa10.24□□□□□ -0.77
MSL3-202ENST00000337339 ATXN8OSP0DMR3 200 aa10.24□□□□□ -0.77
MSL3-202ENST00000337339 POLR2BP30876 1174 aaKnown RBP10.24□□□□□ -0.77
MSL3-202ENST00000337339 MXD4Q14582 209 aaPredicted RBP10.24□□□□□ -0.77
MSL3-202ENST00000337339 FAM102AQ5T9C2 384 aaPredicted RBP10.24□□□□□ -0.77
MSL3-202ENST00000337339 SPOCD1Q6ZMY3 1216 aa10.24□□□□□ -0.77
MSL3-202ENST00000337339 RCOR2Q8IZ40 523 aa10.24□□□□□ -0.77
MSL3-202ENST00000337339 RNPEPQ9H4A4 650 aa10.24□□□□□ -0.77
MSL3-202ENST00000337339 CD248Q9HCU0 757 aa10.24□□□□□ -0.77
MSL3-202ENST00000337339 NGRNQ9NPE2 291 aaKnown RBP10.24□□□□□ -0.77
MSL3-202ENST00000337339 RNF181Q9P0P0 153 aa10.24□□□□□ -0.77
MSL3-202ENST00000337339 AGAP1Q9UPQ3 857 aa10.24□□□□□ -0.77
MSL3-202ENST00000337339 CLEC11AQ9Y240 323 aa10.24□□□□□ -0.77
MSL3-202ENST00000337339 HEY1Q9Y5J3 304 aa10.24□□□□□ -0.77
MSL3-202ENST00000337339 RNF8O76064 485 aa10.24□□□□□ -0.77
MSL3-202ENST00000337339 ZNF286BP0CG31 522 aa10.24□□□□□ -0.77
MSL3-202ENST00000337339 CA4P22748 312 aa10.24□□□□□ -0.77
MSL3-202ENST00000337339 IREB2P48200 963 aaKnown RBP10.24□□□□□ -0.77
MSL3-202ENST00000337339 C1QBPQ07021 282 aaKnown RBP10.24□□□□□ -0.77
MSL3-202ENST00000337339 PTK6Q13882 451 aa10.24□□□□□ -0.77
MSL3-202ENST00000337339 TAF5Q15542 800 aa10.24□□□□□ -0.77
MSL3-202ENST00000337339 CNGA2Q16280 664 aa10.24□□□□□ -0.77
MSL3-202ENST00000337339 AMHR2Q16671 573 aa10.24□□□□□ -0.77
MSL3-202ENST00000337339 PLEKHA7Q6IQ23 1121 aa10.24□□□□□ -0.77
MSL3-202ENST00000337339 WDR49Q8IV35 697 aa10.24□□□□□ -0.77
MSL3-202ENST00000337339 ACTL9Q8TC94 416 aa10.24□□□□□ -0.77
MSL3-202ENST00000337339 SMYD3Q9H7B4 428 aa10.24□□□□□ -0.77
MSL3-202ENST00000337339 TMEM191CA6NGB0 347 aa10.24□□□□□ -0.77
MSL3-202ENST00000337339 CD48P09326 243 aa10.24□□□□□ -0.77
MSL3-202ENST00000337339 CETPP11597 493 aa10.24□□□□□ -0.77
MSL3-202ENST00000337339 GBP2P32456 591 aaPredicted RBP10.24□□□□□ -0.77
MSL3-202ENST00000337339 ABCD1P33897 745 aa10.24□□□□□ -0.77
MSL3-202ENST00000337339 SCTRP47872 440 aa10.24□□□□□ -0.77
MSL3-202ENST00000337339 GCLCP48506 637 aaPredicted RBP10.24□□□□□ -0.77
MSL3-202ENST00000337339 OTUD4Q01804 1114 aaKnown RBP10.24□□□□□ -0.77
MSL3-202ENST00000337339 TFDP1Q14186 410 aa10.24□□□□□ -0.77
MSL3-202ENST00000337339 HADHQ16836 314 aaKnown RBP10.24□□□□□ -0.77
MSL3-202ENST00000337339 PALM2Q8IXS6 379 aa10.24□□□□□ -0.77
MSL3-202ENST00000337339 KIF2BQ8N4N8 673 aa10.24□□□□□ -0.77
MSL3-202ENST00000337339 FAM71DQ8N9W8 422 aa10.24□□□□□ -0.77
MSL3-202ENST00000337339 C12orf42Q96LP6 360 aa10.24□□□□□ -0.77
MSL3-202ENST00000337339 SLITRK1Q96PX8 696 aa10.24□□□□□ -0.77
MSL3-202ENST00000337339 ADAM7Q9H2U9 754 aa10.24□□□□□ -0.77
MSL3-202ENST00000337339 SLC40A1Q9NP59 571 aa10.24□□□□□ -0.77
MSL3-202ENST00000337339 HMGXB4Q9UGU5 601 aa10.24□□□□□ -0.77
MSL3-202ENST00000337339 ADAMTS5Q9UNA0 930 aa10.24□□□□□ -0.77
MSL3-202ENST00000337339 INSRRP14616 1297 aa10.23□□□□□ -0.77
MSL3-202ENST00000337339 GAD2Q05329 585 aa10.23□□□□□ -0.77
MSL3-202ENST00000337339 PPP6R3Q5H9R7 873 aaPredicted RBP10.23□□□□□ -0.77
MSL3-202ENST00000337339 C1orf228Q6PIY5 440 aa10.23□□□□□ -0.77
MSL3-202ENST00000337339 PHF13Q86YI8 300 aaPredicted RBP10.23□□□□□ -0.77
MSL3-202ENST00000337339 RIOX2Q8IUF8 465 aa10.23□□□□□ -0.77
MSL3-202ENST00000337339 KATNAL2Q8IYT4 538 aa10.23□□□□□ -0.77
MSL3-202ENST00000337339 PYROXD1Q8WU10 500 aa10.23□□□□□ -0.77
MSL3-202ENST00000337339 ADPGKQ9BRR6 497 aa10.23□□□□□ -0.77
MSL3-202ENST00000337339 NIFKQ9BYG3 293 aaKnown RBP10.23□□□□□ -0.77
MSL3-202ENST00000337339 MIS12Q9H081 205 aa10.23□□□□□ -0.77
MSL3-202ENST00000337339 KLC4Q9NSK0 619 aa10.23□□□□□ -0.77
MSL3-202ENST00000337339 ABCF3Q9NUQ8 709 aa10.23□□□□□ -0.77
MSL3-202ENST00000337339 FAM49BQ9NUQ9 324 aa10.23□□□□□ -0.77
MSL3-202ENST00000337339 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.23□□□□□ -0.77
MSL3-202ENST00000337339 SYNJ2BP-COX16A0A087WUM0 186 aa10.23□□□□□ -0.77
MSL3-202ENST00000337339 CCT8L1PA6NM43 557 aa10.23□□□□□ -0.77
MSL3-202ENST00000337339 H7C0C1 242 aa10.23□□□□□ -0.77
MSL3-202ENST00000337339 CDH16O75309 829 aa10.23□□□□□ -0.77
MSL3-202ENST00000337339 STAG3L1P0CL83 205 aa10.23□□□□□ -0.77
MSL3-202ENST00000337339 IVDP26440 423 aa10.23□□□□□ -0.77
MSL3-202ENST00000337339 SSTR1P30872 391 aa10.23□□□□□ -0.77
MSL3-202ENST00000337339 ATP5OP48047 213 aa10.23□□□□□ -0.77
MSL3-202ENST00000337339 YARSP54577 528 aaKnown RBP10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms