RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 ASTE1Q2TB18 679 aaPredicted RBP22.92■■□□□ 1.26
TPM1-204ENST00000334895 LRIT3Q3SXY7 679 aa22.92■■□□□ 1.26
TPM1-204ENST00000334895 TDRD12Q587J7 1177 aaKnown RBP22.92■■□□□ 1.26
TPM1-204ENST00000334895 HABP4Q5JVS0 413 aaKnown RBP22.92■■□□□ 1.26
TPM1-204ENST00000334895 KIAA0319Q5VV43 1072 aa22.92■■□□□ 1.26
TPM1-204ENST00000334895 RAD9BQ6WBX8 426 aa22.92■■□□□ 1.26
TPM1-204ENST00000334895 ACOT1Q86TX2 421 aa22.92■■□□□ 1.26
TPM1-204ENST00000334895 TMTC1Q8IUR5 882 aa22.92■■□□□ 1.26
TPM1-204ENST00000334895 SPATA18Q8TC71 538 aa22.92■■□□□ 1.26
TPM1-204ENST00000334895 LPIN3Q9BQK8 851 aa22.92■■□□□ 1.26
TPM1-204ENST00000334895 NHEJ1Q9H9Q4 299 aaPredicted RBP22.92■■□□□ 1.26
TPM1-204ENST00000334895 DDX43Q9NXZ2 648 aaKnown RBP22.92■■□□□ 1.26
TPM1-204ENST00000334895 BZW2Q9Y6E2 419 aaKnown RBP22.92■■□□□ 1.26
TPM1-204ENST00000334895 LINC01553A4QN01 128 aa22.91■■□□□ 1.26
TPM1-204ENST00000334895 ACAT1P24752 427 aaKnown RBP22.91■■□□□ 1.26
TPM1-204ENST00000334895 GNA15P30679 374 aa22.91■■□□□ 1.26
TPM1-204ENST00000334895 LHX1P48742 406 aa22.91■■□□□ 1.26
TPM1-204ENST00000334895 PDE6CP51160 858 aa22.91■■□□□ 1.26
TPM1-204ENST00000334895 SPG21Q9NZD8 308 aa22.91■■□□□ 1.26
TPM1-204ENST00000334895 SSU72P8A0A1W2PR75 194 aa22.9■■□□□ 1.26
TPM1-204ENST00000334895 SOX1O00570 391 aaPredicted RBP22.9■■□□□ 1.26
TPM1-204ENST00000334895 BRD2P25440 801 aaKnown RBP22.9■■□□□ 1.26
TPM1-204ENST00000334895 BPIFB4P59827 614 aa22.9■■□□□ 1.26
TPM1-204ENST00000334895 ELAVL2Q12926 359 aaKnown RBP22.9■■□□□ 1.26
TPM1-204ENST00000334895 CCDC142Q17RM4 750 aa22.9■■□□□ 1.26
TPM1-204ENST00000334895 TAF3Q5VWG9 929 aa22.9■■□□□ 1.26
TPM1-204ENST00000334895 OVOS1Q6IE37 1185 aa22.9■■□□□ 1.26
TPM1-204ENST00000334895 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.9■■□□□ 1.26
TPM1-204ENST00000334895 SPRED2Q7Z698 418 aa22.9■■□□□ 1.26
TPM1-204ENST00000334895 CRYBG2Q8N1P7 616 aa22.9■■□□□ 1.26
TPM1-204ENST00000334895 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.9■■□□□ 1.26
TPM1-204ENST00000334895 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.9■■□□□ 1.26
TPM1-204ENST00000334895 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.9■■□□□ 1.26
TPM1-204ENST00000334895 ARHGEF37A1IGU5 675 aa22.9■■□□□ 1.26
TPM1-204ENST00000334895 CARNS1A5YM72 827 aa22.9■■□□□ 1.26
TPM1-204ENST00000334895 ATP2C2O75185 946 aa22.9■■□□□ 1.26
TPM1-204ENST00000334895 OAZ2O95190 189 aa22.9■■□□□ 1.26
TPM1-204ENST00000334895 CFHP08603 1231 aa22.9■■□□□ 1.26
TPM1-204ENST00000334895 PSMC1P62191 440 aaKnown RBP22.9■■□□□ 1.26
TPM1-204ENST00000334895 RTP2Q5QGT7 225 aa22.9■■□□□ 1.26
TPM1-204ENST00000334895 VARS2Q5ST30 1063 aaKnown RBP22.9■■□□□ 1.26
TPM1-204ENST00000334895 METTL23Q86XA0 190 aa22.9■■□□□ 1.26
TPM1-204ENST00000334895 C12orf29Q8N999 325 aa22.9■■□□□ 1.26
TPM1-204ENST00000334895 OR10T2Q8NGX3 314 aa22.9■■□□□ 1.26
TPM1-204ENST00000334895 LNX1Q8TBB1 728 aaPredicted RBP22.9■■□□□ 1.26
TPM1-204ENST00000334895 ZNF606Q8WXB4 792 aa22.9■■□□□ 1.26
TPM1-204ENST00000334895 TMEM169Q96HH4 297 aa22.9■■□□□ 1.26
TPM1-204ENST00000334895 AGPAT1Q99943 283 aa22.9■■□□□ 1.26
TPM1-204ENST00000334895 AAASQ9NRG9 546 aa22.9■■□□□ 1.26
TPM1-204ENST00000334895 YBX2Q9Y2T7 364 aaKnown RBP22.9■■□□□ 1.26
TPM1-204ENST00000334895 MMEP08473 750 aa22.89■■□□□ 1.25
TPM1-204ENST00000334895 FMO1Q01740 532 aa22.89■■□□□ 1.25
TPM1-204ENST00000334895 CDR2Q01850 454 aa22.89■■□□□ 1.25
TPM1-204ENST00000334895 YWHAHQ04917 246 aaPredicted RBP22.89■■□□□ 1.25
TPM1-204ENST00000334895 MRPL58Q14197 206 aaKnown RBP22.89■■□□□ 1.25
TPM1-204ENST00000334895 CEP57Q86XR8 500 aa22.89■■□□□ 1.25
TPM1-204ENST00000334895 PALB2Q86YC2 1186 aa22.89■■□□□ 1.25
TPM1-204ENST00000334895 HEXIM2Q96MH2 286 aaKnown RBP22.89■■□□□ 1.25
TPM1-204ENST00000334895 PUF60Q9UHX1 559 aaKnown RBP22.89■■□□□ 1.25
TPM1-204ENST00000334895 PCDHB12Q9Y5F1 795 aa22.89■■□□□ 1.25
TPM1-204ENST00000334895 MYO9BQ13459 2157 aa22.89■■□□□ 1.25
TPM1-204ENST00000334895 PLXNA4Q9HCM2 1894 aa22.88■■□□□ 1.25
TPM1-204ENST00000334895 DDX3XO00571 662 aaKnown RBP eCLIP22.88■■□□□ 1.252e-8■■■■□ 19.9
TPM1-204ENST00000334895 THAP12O43422 761 aa22.88■■□□□ 1.25
TPM1-204ENST00000334895 CD19P15391 556 aa22.88■■□□□ 1.25
TPM1-204ENST00000334895 SSTR3P32745 418 aaPredicted RBP22.88■■□□□ 1.25
TPM1-204ENST00000334895 PPM1AP35813 382 aa22.88■■□□□ 1.25
TPM1-204ENST00000334895 PBX2P40425 430 aa22.88■■□□□ 1.25
TPM1-204ENST00000334895 GLYCTKQ8IVS8 523 aa22.88■■□□□ 1.25
TPM1-204ENST00000334895 SLC30A5Q8TAD4 765 aa22.88■■□□□ 1.25
TPM1-204ENST00000334895 TMEM209Q96SK2 561 aa22.88■■□□□ 1.25
TPM1-204ENST00000334895 PCDHB18PQ96TA0 734 aa22.88■■□□□ 1.25
TPM1-204ENST00000334895 SYT15Q9BQS2 421 aa22.88■■□□□ 1.25
TPM1-204ENST00000334895 CRTAC1Q9NQ79 661 aa22.88■■□□□ 1.25
TPM1-204ENST00000334895 CHST7Q9NS84 486 aa22.88■■□□□ 1.25
TPM1-204ENST00000334895 PCDHA11Q9Y5I1 949 aa22.88■■□□□ 1.25
TPM1-204ENST00000334895 SZT2Q5T011 3432 aa22.88■■□□□ 1.25
TPM1-204ENST00000334895 A0A087X0T9 212 aa22.87■■□□□ 1.25
TPM1-204ENST00000334895 ARHGAP6O43182 974 aa22.87■■□□□ 1.25
TPM1-204ENST00000334895 FGF18O76093 207 aa22.87■■□□□ 1.25
TPM1-204ENST00000334895 CA3P07451 260 aa22.87■■□□□ 1.25
TPM1-204ENST00000334895 FAM228BP0C875 321 aa22.87■■□□□ 1.25
TPM1-204ENST00000334895 VDRP11473 427 aa22.87■■□□□ 1.25
TPM1-204ENST00000334895 KIF11P52732 1056 aa22.87■■□□□ 1.25
TPM1-204ENST00000334895 DDX53Q86TM3 631 aaKnown RBP22.87■■□□□ 1.25
TPM1-204ENST00000334895 B3GALNT2Q8NCR0 500 aa22.87■■□□□ 1.25
TPM1-204ENST00000334895 LRCH3Q96II8 777 aa22.87■■□□□ 1.25
TPM1-204ENST00000334895 CCDC42Q96M95 316 aa22.87■■□□□ 1.25
TPM1-204ENST00000334895 PKMYT1Q99640 499 aa22.87■■□□□ 1.25
TPM1-204ENST00000334895 ACBD6Q9BR61 282 aa22.87■■□□□ 1.25
TPM1-204ENST00000334895 C17orf80Q9BSJ5 609 aa22.87■■□□□ 1.25
TPM1-204ENST00000334895 TTPALQ9BTX7 342 aa22.87■■□□□ 1.25
TPM1-204ENST00000334895 PBX4Q9BYU1 374 aa22.87■■□□□ 1.25
TPM1-204ENST00000334895 FAM49BQ9NUQ9 324 aa22.87■■□□□ 1.25
TPM1-204ENST00000334895 SPTLC3Q9NUV7 552 aa22.87■■□□□ 1.25
TPM1-204ENST00000334895 ADAMTS1Q9UHI8 967 aa22.87■■□□□ 1.25
TPM1-204ENST00000334895 CDH9Q9ULB4 789 aa22.87■■□□□ 1.25
TPM1-204ENST00000334895 CHD9Q3L8U1 2897 aa22.87■■□□□ 1.25
TPM1-204ENST00000334895 O00370 1275 aa22.86■■□□□ 1.25
TPM1-204ENST00000334895 ZNF263O14978 683 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms