RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 TWNKQ96RR1 684 aa20.01■□□□□ 0.79
RFTN1-201ENST00000334133 ELAC2Q9BQ52 826 aaKnown RBP20.01■□□□□ 0.79
RFTN1-201ENST00000334133 A0A0G2JLL6 359 aaPredicted RBP20.01■□□□□ 0.79
RFTN1-201ENST00000334133 GPR25O00155 361 aa20.01■□□□□ 0.79
RFTN1-201ENST00000334133 BANF1O75531 89 aa20.01■□□□□ 0.79
RFTN1-201ENST00000334133 CDCA2Q69YH5 1023 aaPredicted RBP20.01■□□□□ 0.79
RFTN1-201ENST00000334133 CCDC121Q6ZUS5 278 aa20.01■□□□□ 0.79
RFTN1-201ENST00000334133 PRRT2Q7Z6L0 340 aaPredicted RBP20.01■□□□□ 0.79
RFTN1-201ENST00000334133 ZNF317Q96PQ6 595 aaPredicted RBP20.01■□□□□ 0.79
RFTN1-201ENST00000334133 CDT1Q9H211 546 aa20.01■□□□□ 0.79
RFTN1-201ENST00000334133 SMYD3Q9H7B4 428 aa20.01■□□□□ 0.79
RFTN1-201ENST00000334133 PCSK1NQ9UHG2 260 aa20.01■□□□□ 0.79
RFTN1-201ENST00000334133 TMEM120BA0PK00 339 aa20■□□□□ 0.79
RFTN1-201ENST00000334133 ARSEP51690 589 aa20■□□□□ 0.79
RFTN1-201ENST00000334133 FAM167AQ96KS9 214 aa20■□□□□ 0.79
RFTN1-201ENST00000334133 RBM15Q96T37 977 aaKnown RBP eCLIP20■□□□□ 0.79
RFTN1-201ENST00000334133 SDCBP2Q9H190 292 aa20■□□□□ 0.79
RFTN1-201ENST00000334133 MGAMO43451 1857 aa20■□□□□ 0.79
RFTN1-201ENST00000334133 LIASO43766 372 aa20■□□□□ 0.79
RFTN1-201ENST00000334133 TNNC2P02585 160 aa20■□□□□ 0.79
RFTN1-201ENST00000334133 IREB2P48200 963 aaKnown RBP20■□□□□ 0.79
RFTN1-201ENST00000334133 MKRN3Q13064 507 aaKnown RBP20■□□□□ 0.79
RFTN1-201ENST00000334133 GPS1Q13098 491 aa20■□□□□ 0.79
RFTN1-201ENST00000334133 CNGA2Q16280 664 aa20■□□□□ 0.79
RFTN1-201ENST00000334133 SPOCD1Q6ZMY3 1216 aa20■□□□□ 0.79
RFTN1-201ENST00000334133 CCDC89Q8N998 374 aa20■□□□□ 0.79
RFTN1-201ENST00000334133 TCP11Q8WWU5 503 aa20■□□□□ 0.79
RFTN1-201ENST00000334133 RNF19AQ9NV58 838 aa20■□□□□ 0.79
RFTN1-201ENST00000334133 DNM1LO00429 736 aa19.99■□□□□ 0.79
RFTN1-201ENST00000334133 VTNP04004 478 aa19.99■□□□□ 0.79
RFTN1-201ENST00000334133 ITGB3P05106 788 aa19.99■□□□□ 0.79
RFTN1-201ENST00000334133 CALB1P05937 261 aa19.99■□□□□ 0.79
RFTN1-201ENST00000334133 MPP2Q14168 576 aa19.99■□□□□ 0.79
RFTN1-201ENST00000334133 SRRM1Q8IYB3 904 aaKnown RBP19.99■□□□□ 0.79
RFTN1-201ENST00000334133 KIAA0319LQ8IZA0 1049 aa19.99■□□□□ 0.79
RFTN1-201ENST00000334133 SYNCQ9H7C4 482 aa19.99■□□□□ 0.79
RFTN1-201ENST00000334133 RNF181Q9P0P0 153 aa19.99■□□□□ 0.79
RFTN1-201ENST00000334133 SIX4Q9UIU6 781 aa19.99■□□□□ 0.79
RFTN1-201ENST00000334133 ACKR2O00590 384 aa19.99■□□□□ 0.79
RFTN1-201ENST00000334133 HGSO14964 777 aaPredicted RBP19.99■□□□□ 0.79
RFTN1-201ENST00000334133 PSMA2P25787 234 aa19.99■□□□□ 0.79
RFTN1-201ENST00000334133 MAN1A1P33908 653 aa19.99■□□□□ 0.79
RFTN1-201ENST00000334133 TAF5Q15542 800 aa19.99■□□□□ 0.79
RFTN1-201ENST00000334133 ANKRD36BP1Q96IX9 119 aa19.99■□□□□ 0.79
RFTN1-201ENST00000334133 SAYSD1Q9NPB0 183 aa19.99■□□□□ 0.79
RFTN1-201ENST00000334133 SIP14410 1827 aa19.99■□□□□ 0.79
RFTN1-201ENST00000334133 A0A087WZ62 844 aa19.98■□□□□ 0.79
RFTN1-201ENST00000334133 TCRBV5S1A1TA0A578 114 aa19.98■□□□□ 0.79
RFTN1-201ENST00000334133 CD48P09326 243 aa19.98■□□□□ 0.79
RFTN1-201ENST00000334133 KLRC2P26717 231 aa19.98■□□□□ 0.79
RFTN1-201ENST00000334133 NRLP54845 237 aa19.98■□□□□ 0.79
RFTN1-201ENST00000334133 GAD2Q05329 585 aa19.98■□□□□ 0.79
RFTN1-201ENST00000334133 C1orf127Q8N9H9 656 aa19.98■□□□□ 0.79
RFTN1-201ENST00000334133 CPXM1Q96SM3 734 aa19.98■□□□□ 0.79
RFTN1-201ENST00000334133 FDXACB1Q9BRP7 624 aaPredicted RBP19.98■□□□□ 0.79
RFTN1-201ENST00000334133 CEP350Q5VT06 3117 aa19.98■□□□□ 0.79
RFTN1-201ENST00000334133 LACTBL1A8MY62 500 aa19.98■□□□□ 0.79
RFTN1-201ENST00000334133 ZNF286BP0CG31 522 aa19.98■□□□□ 0.79
RFTN1-201ENST00000334133 IL1R2P27930 398 aa19.98■□□□□ 0.79
RFTN1-201ENST00000334133 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.98■□□□□ 0.79
RFTN1-201ENST00000334133 ERO1BQ86YB8 467 aa19.98■□□□□ 0.79
RFTN1-201ENST00000334133 RCOR2Q8IZ40 523 aa19.98■□□□□ 0.79
RFTN1-201ENST00000334133 OPTNQ96CV9 577 aa19.98■□□□□ 0.79
RFTN1-201ENST00000334133 TMEM109Q9BVC6 243 aa19.98■□□□□ 0.79
RFTN1-201ENST00000334133 RPF1Q9H9Y2 349 aaKnown RBP19.98■□□□□ 0.79
RFTN1-201ENST00000334133 PTPRHQ9HD43 1115 aa19.98■□□□□ 0.79
RFTN1-201ENST00000334133 GINS2Q9Y248 185 aa19.98■□□□□ 0.79
RFTN1-201ENST00000334133 IGKV6-21A0A0C4DH24 114 aa19.98■□□□□ 0.79
RFTN1-201ENST00000334133 SGK1O00141 431 aa19.98■□□□□ 0.79
RFTN1-201ENST00000334133 PSMC1P62191 440 aaKnown RBP19.98■□□□□ 0.79
RFTN1-201ENST00000334133 MBTD1Q05BQ5 628 aa19.98■□□□□ 0.79
RFTN1-201ENST00000334133 ZKSCAN8Q15776 578 aaPredicted RBP19.98■□□□□ 0.79
RFTN1-201ENST00000334133 SYCP2LQ5T4T6 812 aa19.98■□□□□ 0.79
RFTN1-201ENST00000334133 JADE1Q6IE81 842 aa19.98■□□□□ 0.79
RFTN1-201ENST00000334133 TSHZ1Q6ZSZ6 1077 aa19.98■□□□□ 0.79
RFTN1-201ENST00000334133 CCDC13Q8IYE1 715 aa19.98■□□□□ 0.79
RFTN1-201ENST00000334133 ARFGAP1Q8N6T3 406 aa19.98■□□□□ 0.79
RFTN1-201ENST00000334133 ADARB2Q9NS39 739 aaKnown RBP19.98■□□□□ 0.79
RFTN1-201ENST00000334133 AGTPBP1Q9UPW5 1226 aa19.98■□□□□ 0.79
RFTN1-201ENST00000334133 KRT3P12035 628 aa19.97■□□□□ 0.79
RFTN1-201ENST00000334133 INSRRP14616 1297 aa19.97■□□□□ 0.79
RFTN1-201ENST00000334133 CETN2P41208 172 aa19.97■□□□□ 0.79
RFTN1-201ENST00000334133 RAB6CQ53S08 254 aa19.97■□□□□ 0.79
RFTN1-201ENST00000334133 CCDC62Q6P9F0 684 aa19.97■□□□□ 0.79
RFTN1-201ENST00000334133 VSTM1Q6UX27 236 aa19.97■□□□□ 0.79
RFTN1-201ENST00000334133 SYDE1Q6ZW31 735 aaPredicted RBP19.97■□□□□ 0.79
RFTN1-201ENST00000334133 TAOK1Q7L7X3 1001 aa19.97■□□□□ 0.79
RFTN1-201ENST00000334133 SPATS2Q86XZ4 545 aaKnown RBP19.97■□□□□ 0.79
RFTN1-201ENST00000334133 UBA3Q8TBC4 463 aa19.97■□□□□ 0.79
RFTN1-201ENST00000334133 RAB6CQ9H0N0 254 aa19.97■□□□□ 0.79
RFTN1-201ENST00000334133 FZD8Q9H461 694 aa19.97■□□□□ 0.79
RFTN1-201ENST00000334133 METTL5Q9NRN9 209 aaKnown RBP19.97■□□□□ 0.79
RFTN1-201ENST00000334133 NAALADL1Q9UQQ1 740 aa19.97■□□□□ 0.79
RFTN1-201ENST00000334133 AKT3Q9Y243 479 aa19.97■□□□□ 0.79
RFTN1-201ENST00000334133 CEP83Q9Y592 693 aa19.97■□□□□ 0.79
RFTN1-201ENST00000334133 C5orf60A6NFR6 353 aa19.97■□□□□ 0.79
RFTN1-201ENST00000334133 SRRM3A6NNA2 597 aaPredicted RBP19.97■□□□□ 0.79
RFTN1-201ENST00000334133 TJP3O95049 919 aa19.97■□□□□ 0.79
RFTN1-201ENST00000334133 BRAFP15056 766 aa19.97■□□□□ 0.79
RFTN1-201ENST00000334133 PECAM1P16284 738 aaPredicted RBP19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms