RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 ITGADQ13349 1161 aa10.75□□□□□ -0.69
SPTBN1-201ENST00000333896 KMT5AQ9NQR1 393 aa10.75□□□□□ -0.69
SPTBN1-201ENST00000333896 HAO1Q9UJM8 370 aa10.75□□□□□ -0.69
SPTBN1-201ENST00000333896 MAP3K15Q6ZN16 1313 aa10.75□□□□□ -0.69
SPTBN1-201ENST00000333896 MLNP12872 115 aa10.75□□□□□ -0.69
SPTBN1-201ENST00000333896 GPR1P46091 355 aa10.75□□□□□ -0.69
SPTBN1-201ENST00000333896 NCAPHQ15003 741 aa10.75□□□□□ -0.69
SPTBN1-201ENST00000333896 VN1R5Q7Z5H4 357 aa10.75□□□□□ -0.69
SPTBN1-201ENST00000333896 ARHGEF19Q8IW93 802 aa10.75□□□□□ -0.69
SPTBN1-201ENST00000333896 VMP1Q96GC9 406 aa10.75□□□□□ -0.69
SPTBN1-201ENST00000333896 RTCBQ9Y3I0 505 aaKnown RBP10.75□□□□□ -0.69
SPTBN1-201ENST00000333896 POTEMA6NI47 508 aa10.75□□□□□ -0.69
SPTBN1-201ENST00000333896 ALDH5A1P51649 535 aaPredicted RBP10.75□□□□□ -0.69
SPTBN1-201ENST00000333896 EFR3AQ14156 821 aa10.75□□□□□ -0.69
SPTBN1-201ENST00000333896 POTEHQ6S545 545 aa10.75□□□□□ -0.69
SPTBN1-201ENST00000333896 POTEGQ6S5H5 508 aa10.75□□□□□ -0.69
SPTBN1-201ENST00000333896 ZNF398Q8TD17 642 aa10.75□□□□□ -0.69
SPTBN1-201ENST00000333896 GPKOWQ92917 476 aaPredicted RBP eCLIP10.75□□□□□ -0.69
SPTBN1-201ENST00000333896 FYNP06241 537 aa10.75□□□□□ -0.69
SPTBN1-201ENST00000333896 THRAP10827 490 aa10.75□□□□□ -0.69
SPTBN1-201ENST00000333896 PABPC1P11940 636 aaKnown RBP10.75□□□□□ -0.69
SPTBN1-201ENST00000333896 IST1P53990 364 aa10.75□□□□□ -0.69
SPTBN1-201ENST00000333896 C12orf60Q5U649 245 aa10.75□□□□□ -0.69
SPTBN1-201ENST00000333896 SULF1Q8IWU6 871 aa10.75□□□□□ -0.69
SPTBN1-201ENST00000333896 SSH3Q8TE77 659 aa10.75□□□□□ -0.69
SPTBN1-201ENST00000333896 XAGE2Q96GT9 111 aa10.75□□□□□ -0.69
SPTBN1-201ENST00000333896 KLHL3Q9UH77 587 aa10.75□□□□□ -0.69
SPTBN1-201ENST00000333896 ADAMTS1Q9UHI8 967 aa10.75□□□□□ -0.69
SPTBN1-201ENST00000333896 LRFN2Q9ULH4 789 aa10.75□□□□□ -0.69
SPTBN1-201ENST00000333896 PHGDHO43175 533 aaKnown RBP10.75□□□□□ -0.69
SPTBN1-201ENST00000333896 NPR3P17342 541 aa10.75□□□□□ -0.69
SPTBN1-201ENST00000333896 HIBADHP31937 336 aaKnown RBP10.75□□□□□ -0.69
SPTBN1-201ENST00000333896 EXOSC10Q01780 885 aaKnown RBP10.75□□□□□ -0.69
SPTBN1-201ENST00000333896 ZFP69Q49AA0 526 aa10.75□□□□□ -0.69
SPTBN1-201ENST00000333896 DDI2Q5TDH0 399 aa10.75□□□□□ -0.69
SPTBN1-201ENST00000333896 ADGRA2Q96PE1 1338 aa10.75□□□□□ -0.69
SPTBN1-201ENST00000333896 PPP1R2P1Q96PQ5 205 aa10.75□□□□□ -0.69
SPTBN1-201ENST00000333896 MNTQ99583 582 aa10.75□□□□□ -0.69
SPTBN1-201ENST00000333896 INTS13Q9NVM9 706 aa10.75□□□□□ -0.69
SPTBN1-201ENST00000333896 TTC3P53804 2025 aa10.75□□□□□ -0.69
SPTBN1-201ENST00000333896 TNPO2O14787 897 aaKnown RBP10.75□□□□□ -0.69
SPTBN1-201ENST00000333896 HOXB6P17509 224 aaKnown RBP10.75□□□□□ -0.69
SPTBN1-201ENST00000333896 ITGA3P26006 1051 aa10.75□□□□□ -0.69
SPTBN1-201ENST00000333896 LGALS3BPQ08380 585 aa10.75□□□□□ -0.69
SPTBN1-201ENST00000333896 SLC18A3Q16572 532 aa10.75□□□□□ -0.69
SPTBN1-201ENST00000333896 C9orf16Q9BUW7 83 aa10.75□□□□□ -0.69
SPTBN1-201ENST00000333896 EFCAB1Q9HAE3 211 aa10.75□□□□□ -0.69
SPTBN1-201ENST00000333896 FOXO3O43524 673 aa10.75□□□□□ -0.69
SPTBN1-201ENST00000333896 SEMA3DO95025 777 aa10.75□□□□□ -0.69
SPTBN1-201ENST00000333896 FOSP01100 380 aaPredicted RBP10.75□□□□□ -0.69
SPTBN1-201ENST00000333896 CDK17Q00537 523 aa10.75□□□□□ -0.69
SPTBN1-201ENST00000333896 TTC23LQ6PF05 361 aa10.75□□□□□ -0.69
SPTBN1-201ENST00000333896 CHSY1Q86X52 802 aa10.75□□□□□ -0.69
SPTBN1-201ENST00000333896 RHPN2Q8IUC4 686 aa10.75□□□□□ -0.69
SPTBN1-201ENST00000333896 IZUMO1Q8IYV9 350 aa10.75□□□□□ -0.69
SPTBN1-201ENST00000333896 RAB42Q8N4Z0 105 aa10.75□□□□□ -0.69
SPTBN1-201ENST00000333896 TMIEQ8NEW7 156 aa10.75□□□□□ -0.69
SPTBN1-201ENST00000333896 TSPAN14Q8NG11 270 aa10.75□□□□□ -0.69
SPTBN1-201ENST00000333896 ARHGEF11O15085 1522 aa10.74□□□□□ -0.69
SPTBN1-201ENST00000333896 PLEKHG1Q9ULL1 1385 aa10.74□□□□□ -0.69
SPTBN1-201ENST00000333896 MAGEB16A2A368 324 aa10.74□□□□□ -0.69
SPTBN1-201ENST00000333896 TRIM64CA6NLI5 447 aa10.74□□□□□ -0.69
SPTBN1-201ENST00000333896 AIM2O14862 343 aa10.74□□□□□ -0.69
SPTBN1-201ENST00000333896 HPCAP84074 193 aa10.74□□□□□ -0.69
SPTBN1-201ENST00000333896 EFL1Q7Z2Z2 1120 aaKnown RBP10.74□□□□□ -0.69
SPTBN1-201ENST00000333896 RORBQ92753 470 aa10.74□□□□□ -0.69
SPTBN1-201ENST00000333896 FKBP14Q9NWM8 211 aa10.74□□□□□ -0.69
SPTBN1-201ENST00000333896 CNOT7Q9UIV1 285 aaKnown RBP10.74□□□□□ -0.69
SPTBN1-201ENST00000333896 FLT4P35916 1363 aa10.74□□□□□ -0.69
SPTBN1-201ENST00000333896 ZBTB33Q86T24 672 aa10.74□□□□□ -0.69
SPTBN1-201ENST00000333896 ZBED8Q8IZ13 594 aa10.74□□□□□ -0.69
SPTBN1-201ENST00000333896 AMER2Q8N7J2 671 aa10.74□□□□□ -0.69
SPTBN1-201ENST00000333896 USP38Q8NB14 1042 aa10.74□□□□□ -0.69
SPTBN1-201ENST00000333896 SETD9Q8NE22 299 aa10.74□□□□□ -0.69
SPTBN1-201ENST00000333896 GDPD5Q8WTR4 605 aa10.74□□□□□ -0.69
SPTBN1-201ENST00000333896 USP13Q92995 863 aaPredicted RBP10.74□□□□□ -0.69
SPTBN1-201ENST00000333896 RABL2AQ9UBK7 228 aaPredicted RBP10.74□□□□□ -0.69
SPTBN1-201ENST00000333896 TLR2O60603 784 aa10.74□□□□□ -0.69
SPTBN1-201ENST00000333896 ITGA6P23229 1130 aa10.74□□□□□ -0.69
SPTBN1-201ENST00000333896 ZSCAN10Q96SZ4 725 aaPredicted RBP10.74□□□□□ -0.69
SPTBN1-201ENST00000333896 DDX47Q9H0S4 455 aaKnown RBP10.74□□□□□ -0.69
SPTBN1-201ENST00000333896 SH3GLB2Q9NR46 395 aa10.74□□□□□ -0.69
SPTBN1-201ENST00000333896 PHTF1Q9UMS5 762 aa10.74□□□□□ -0.69
SPTBN1-201ENST00000333896 M0QX08 132 aa10.74□□□□□ -0.69
SPTBN1-201ENST00000333896 CHRM1P11229 460 aaPredicted RBP10.74□□□□□ -0.69
SPTBN1-201ENST00000333896 ALOX15P16050 662 aaPredicted RBP10.74□□□□□ -0.69
SPTBN1-201ENST00000333896 ATF4P18848 351 aaPredicted RBP10.74□□□□□ -0.69
SPTBN1-201ENST00000333896 PAX3P23760 479 aa10.74□□□□□ -0.69
SPTBN1-201ENST00000333896 ACAT1P24752 427 aaKnown RBP10.74□□□□□ -0.69
SPTBN1-201ENST00000333896 NAALADL2Q58DX5 795 aa10.74□□□□□ -0.69
SPTBN1-201ENST00000333896 KRT78Q8N1N4 520 aa10.74□□□□□ -0.69
SPTBN1-201ENST00000333896 FANCBQ8NB91 859 aa10.74□□□□□ -0.69
SPTBN1-201ENST00000333896 CDHR1Q96JP9 859 aa10.74□□□□□ -0.69
SPTBN1-201ENST00000333896 SPEF1Q9Y4P9 236 aa10.74□□□□□ -0.69
SPTBN1-201ENST00000333896 ZNF532Q9HCE3 1301 aa10.74□□□□□ -0.69
SPTBN1-201ENST00000333896 GRIN2AQ12879 1464 aa10.74□□□□□ -0.69
SPTBN1-201ENST00000333896 INO80B-WBP1J3KQ70 363 aa10.74□□□□□ -0.69
SPTBN1-201ENST00000333896 IFNA16P05015 189 aa10.74□□□□□ -0.69
SPTBN1-201ENST00000333896 RXRGP48443 463 aa10.74□□□□□ -0.69
SPTBN1-201ENST00000333896 OSTNP61366 133 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms