RNA–Protein interactions for RNA: ENST00000331433.4

CLCNKA-201, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,475 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-201ENST00000331433 ZNF667Q5HYK9 610 aa15.71■□□□□ 0.11
CLCNKA-201ENST00000331433 JADE1Q6IE81 842 aa15.71■□□□□ 0.11
CLCNKA-201ENST00000331433 RCOR2Q8IZ40 523 aa15.71■□□□□ 0.11
CLCNKA-201ENST00000331433 C3orf20Q8ND61 904 aa15.71■□□□□ 0.11
CLCNKA-201ENST00000331433 RBM41Q96IZ5 413 aaKnown RBP15.71■□□□□ 0.11
CLCNKA-201ENST00000331433 TWNKQ96RR1 684 aa15.71■□□□□ 0.11
CLCNKA-201ENST00000331433 AKT3Q9Y243 479 aa15.71■□□□□ 0.11
CLCNKA-201ENST00000331433 ITGB3P05106 788 aa15.71■□□□□ 0.1
CLCNKA-201ENST00000331433 YBX3P16989 372 aaKnown RBP eCLIP15.71■□□□□ 0.1
CLCNKA-201ENST00000331433 EPHX2P34913 555 aa15.71■□□□□ 0.1
CLCNKA-201ENST00000331433 IZUMO3Q5VZ72 239 aa15.71■□□□□ 0.1
CLCNKA-201ENST00000331433 CCDC89Q8N998 374 aa15.71■□□□□ 0.1
CLCNKA-201ENST00000331433 HAUS1Q96CS2 278 aa15.71■□□□□ 0.1
CLCNKA-201ENST00000331433 PRMT7Q9NVM4 692 aaPredicted RBP15.71■□□□□ 0.1
CLCNKA-201ENST00000331433 ASAP2O43150 1006 aa15.7■□□□□ 0.1
CLCNKA-201ENST00000331433 IL18RAPO95256 599 aa15.7■□□□□ 0.1
CLCNKA-201ENST00000331433 RFC1P35251 1148 aaPredicted RBP15.7■□□□□ 0.1
CLCNKA-201ENST00000331433 CETN2P41208 172 aa15.7■□□□□ 0.1
CLCNKA-201ENST00000331433 MAGEA9P43362 315 aa15.7■□□□□ 0.1
CLCNKA-201ENST00000331433 PHKA2P46019 1235 aa15.7■□□□□ 0.1
CLCNKA-201ENST00000331433 RAD23BP54727 409 aa15.7■□□□□ 0.1
CLCNKA-201ENST00000331433 PDE4CQ08493 712 aa15.7■□□□□ 0.1
CLCNKA-201ENST00000331433 AMHR2Q16671 573 aa15.7■□□□□ 0.1
CLCNKA-201ENST00000331433 EAPPQ56P03 285 aaPredicted RBP15.7■□□□□ 0.1
CLCNKA-201ENST00000331433 TAPT1Q6NXT6 567 aa15.7■□□□□ 0.1
CLCNKA-201ENST00000331433 SPOCD1Q6ZMY3 1216 aa15.7■□□□□ 0.1
CLCNKA-201ENST00000331433 ARMC9Q7Z3E5 817 aa15.7■□□□□ 0.1
CLCNKA-201ENST00000331433 AFG1LQ8WV93 481 aa15.7■□□□□ 0.1
CLCNKA-201ENST00000331433 XPO6Q96QU8 1125 aaKnown RBP15.7■□□□□ 0.1
CLCNKA-201ENST00000331433 LRRD1A4D1F6 860 aa15.7■□□□□ 0.1
CLCNKA-201ENST00000331433 LIASO43766 372 aa15.7■□□□□ 0.1
CLCNKA-201ENST00000331433 TTC4O95801 387 aa15.7■□□□□ 0.1
CLCNKA-201ENST00000331433 ZSCAN5DPP0CG00 497 aa15.7■□□□□ 0.1
CLCNKA-201ENST00000331433 KLRC2P26717 231 aa15.7■□□□□ 0.1
CLCNKA-201ENST00000331433 PSMC4P43686 418 aa15.7■□□□□ 0.1
CLCNKA-201ENST00000331433 CDR1P51861 262 aa15.7■□□□□ 0.1
CLCNKA-201ENST00000331433 SNAPC2Q13487 334 aa15.7■□□□□ 0.1
CLCNKA-201ENST00000331433 SMTNL2Q2TAL5 461 aa15.7■□□□□ 0.1
CLCNKA-201ENST00000331433 ERMARDQ5T6L9 678 aa15.7■□□□□ 0.1
CLCNKA-201ENST00000331433 JOSD2Q8TAC2 188 aa15.7■□□□□ 0.1
CLCNKA-201ENST00000331433 BCO2Q9BYV7 579 aa15.7■□□□□ 0.1
CLCNKA-201ENST00000331433 PDZD7Q9H5P4 517 aa15.7■□□□□ 0.1
CLCNKA-201ENST00000331433 ETS1P14921 441 aa15.69■□□□□ 0.1
CLCNKA-201ENST00000331433 ADORA2AP29274 412 aa15.69■□□□□ 0.1
CLCNKA-201ENST00000331433 LIG3P49916 1009 aa15.69■□□□□ 0.1
CLCNKA-201ENST00000331433 YWHAEP62258 255 aaKnown RBP15.69■□□□□ 0.1
CLCNKA-201ENST00000331433 CAV1Q03135 178 aa15.69■□□□□ 0.1
CLCNKA-201ENST00000331433 MKRN3Q13064 507 aaKnown RBP15.69■□□□□ 0.1
CLCNKA-201ENST00000331433 LAMC2Q13753 1193 aa15.69■□□□□ 0.1
CLCNKA-201ENST00000331433 PIGHQ14442 188 aaPredicted RBP15.69■□□□□ 0.1
CLCNKA-201ENST00000331433 P3H1Q32P28 736 aa15.69■□□□□ 0.1
CLCNKA-201ENST00000331433 TNFAIP8L3Q5GJ75 292 aa15.69■□□□□ 0.1
CLCNKA-201ENST00000331433 ZNF484Q5JVG2 852 aa15.69■□□□□ 0.1
CLCNKA-201ENST00000331433 LRRC38Q5VT99 294 aa15.69■□□□□ 0.1
CLCNKA-201ENST00000331433 MAMDC4Q6UXC1 1216 aa15.69■□□□□ 0.1
CLCNKA-201ENST00000331433 USP50Q70EL3 339 aaPredicted RBP15.69■□□□□ 0.1
CLCNKA-201ENST00000331433 CROCCP2Q86T23 111 aa15.69■□□□□ 0.1
CLCNKA-201ENST00000331433 CPXM1Q96SM3 734 aa15.69■□□□□ 0.1
CLCNKA-201ENST00000331433 NFKBIZQ9BYH8 718 aa15.69■□□□□ 0.1
CLCNKA-201ENST00000331433 SPON1Q9HCB6 807 aa15.69■□□□□ 0.1
CLCNKA-201ENST00000331433 NINJ2Q9NZG7 142 aa15.69■□□□□ 0.1
CLCNKA-201ENST00000331433 CTNNAL1Q9UBT7 734 aa15.69■□□□□ 0.1
CLCNKA-201ENST00000331433 DDX20Q9UHI6 824 aaKnown RBP15.69■□□□□ 0.1
CLCNKA-201ENST00000331433 ZNF148Q9UQR1 794 aa15.69■□□□□ 0.1
CLCNKA-201ENST00000331433 FOXO6A8MYZ6 492 aa15.69■□□□□ 0.1
CLCNKA-201ENST00000331433 TJP3O95049 919 aa15.69■□□□□ 0.1
CLCNKA-201ENST00000331433 KRT3P12035 628 aa15.69■□□□□ 0.1
CLCNKA-201ENST00000331433 ARF4P18085 180 aaPredicted RBP15.69■□□□□ 0.1
CLCNKA-201ENST00000331433 PSMA2P25787 234 aa15.69■□□□□ 0.1
CLCNKA-201ENST00000331433 ADCYAP1R1P41586 468 aa15.69■□□□□ 0.1
CLCNKA-201ENST00000331433 KCNT1Q5JUK3 1230 aa15.69■□□□□ 0.1
CLCNKA-201ENST00000331433 MFSD5Q6N075 450 aa15.69■□□□□ 0.1
CLCNKA-201ENST00000331433 EMC1Q8N766 993 aa15.69■□□□□ 0.1
CLCNKA-201ENST00000331433 SLC4A11Q8NBS3 891 aa15.69■□□□□ 0.1
CLCNKA-201ENST00000331433 SHCBP1Q8NEM2 672 aa15.69■□□□□ 0.1
CLCNKA-201ENST00000331433 IPO4Q8TEX9 1081 aaKnown RBP15.69■□□□□ 0.1
CLCNKA-201ENST00000331433 ATXN2LQ8WWM7 1075 aaKnown RBP15.69■□□□□ 0.1
CLCNKA-201ENST00000331433 hCG_1818297A0A087WSY0 165 aa15.68■□□□□ 0.1
CLCNKA-201ENST00000331433 PSMC1P62191 440 aaKnown RBP15.68■□□□□ 0.1
CLCNKA-201ENST00000331433 IFT88Q13099 833 aa15.68■□□□□ 0.1
CLCNKA-201ENST00000331433 ZNF792Q3KQV3 632 aa15.68■□□□□ 0.1
CLCNKA-201ENST00000331433 TFDP3Q5H9I0 405 aa15.68■□□□□ 0.1
CLCNKA-201ENST00000331433 ARFGAP1Q8N6T3 406 aa15.68■□□□□ 0.1
CLCNKA-201ENST00000331433 GPRC5AQ8NFJ5 357 aa15.68■□□□□ 0.1
CLCNKA-201ENST00000331433 CXorf38Q8TB03 319 aa15.68■□□□□ 0.1
CLCNKA-201ENST00000331433 C9orf72Q96LT7 481 aa15.68■□□□□ 0.1
CLCNKA-201ENST00000331433 ROPN1BQ9BZX4 212 aaPredicted RBP15.68■□□□□ 0.1
CLCNKA-201ENST00000331433 ELOVL4Q9GZR5 314 aa15.68■□□□□ 0.1
CLCNKA-201ENST00000331433 ZWILCHQ9H900 591 aa15.68■□□□□ 0.1
CLCNKA-201ENST00000331433 ROPN1Q9HAT0 212 aaPredicted RBP15.68■□□□□ 0.1
CLCNKA-201ENST00000331433 STRIP2Q9ULQ0 834 aa15.68■□□□□ 0.1
CLCNKA-201ENST00000331433 PLXNA1Q9UIW2 1896 aa15.68■□□□□ 0.1
CLCNKA-201ENST00000331433 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.68■□□□□ 0.1
CLCNKA-201ENST00000331433 KIAA0754O94854 1291 aa15.68■□□□□ 0.1
CLCNKA-201ENST00000331433 GH1P01241 217 aa15.68■□□□□ 0.1
CLCNKA-201ENST00000331433 MCF2P10911 925 aa15.68■□□□□ 0.1
CLCNKA-201ENST00000331433 CDKN2BP42772 138 aa15.68■□□□□ 0.1
CLCNKA-201ENST00000331433 TAP1Q03518 808 aa15.68■□□□□ 0.1
CLCNKA-201ENST00000331433 FAM187BQ17R55 369 aa15.68■□□□□ 0.1
CLCNKA-201ENST00000331433 SLC10A6Q3KNW5 377 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms