RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 DNAJC1Q96KC8 554 aaKnown RBP25.56■■□□□ 1.68
SOX1-201ENST00000330949 ADAM33Q9BZ11 813 aa25.56■■□□□ 1.68
SOX1-201ENST00000330949 GLT8D2Q9H1C3 349 aa25.56■■□□□ 1.68
SOX1-201ENST00000330949 MTMR4Q9NYA4 1195 aa25.56■■□□□ 1.68
SOX1-201ENST00000330949 SSX2IPQ9Y2D8 614 aa25.56■■□□□ 1.68
SOX1-201ENST00000330949 RALAP11233 206 aa25.56■■□□□ 1.68
SOX1-201ENST00000330949 FMO1Q01740 532 aa25.56■■□□□ 1.68
SOX1-201ENST00000330949 MOXD1Q6UVY6 613 aa25.56■■□□□ 1.68
SOX1-201ENST00000330949 KYAT3Q6YP21 454 aaKnown RBP25.56■■□□□ 1.68
SOX1-201ENST00000330949 MAP7D3Q8IWC1 876 aa25.56■■□□□ 1.68
SOX1-201ENST00000330949 HEMGNQ9BXL5 484 aa25.56■■□□□ 1.68
SOX1-201ENST00000330949 KLHL4Q9C0H6 718 aa25.56■■□□□ 1.68
SOX1-201ENST00000330949 CAPN14A8MX76 684 aa25.55■■□□□ 1.68
SOX1-201ENST00000330949 USP17L10C9JJH3 530 aa25.55■■□□□ 1.68
SOX1-201ENST00000330949 SPECC1L-ADORA2AF8WAN1 911 aa25.55■■□□□ 1.68
SOX1-201ENST00000330949 STRNO43815 780 aa25.55■■□□□ 1.68
SOX1-201ENST00000330949 ENO1P06733 434 aaKnown RBP25.55■■□□□ 1.68
SOX1-201ENST00000330949 TAL1P17542 331 aaPredicted RBP25.55■■□□□ 1.68
SOX1-201ENST00000330949 RPL5P46777 297 aaKnown RBP25.55■■□□□ 1.68
SOX1-201ENST00000330949 ERFP50548 548 aa25.55■■□□□ 1.68
SOX1-201ENST00000330949 RASA3Q14644 834 aa25.55■■□□□ 1.68
SOX1-201ENST00000330949 PRKD1Q15139 912 aaPredicted RBP25.55■■□□□ 1.68
SOX1-201ENST00000330949 MMEL1Q495T6 779 aa25.55■■□□□ 1.68
SOX1-201ENST00000330949 CHSY1Q86X52 802 aa25.55■■□□□ 1.68
SOX1-201ENST00000330949 FAM71AQ8IYT1 594 aa25.55■■□□□ 1.68
SOX1-201ENST00000330949 ZBED8Q8IZ13 594 aa25.55■■□□□ 1.68
SOX1-201ENST00000330949 ABTB1Q969K4 478 aaPredicted RBP25.55■■□□□ 1.68
SOX1-201ENST00000330949 DDX4Q9NQI0 724 aaKnown RBP25.55■■□□□ 1.68
SOX1-201ENST00000330949 NDC80O14777 642 aa25.55■■□□□ 1.68
SOX1-201ENST00000330949 ALOX15BO15296 676 aa25.55■■□□□ 1.68
SOX1-201ENST00000330949 P4HA2O15460 535 aa25.55■■□□□ 1.68
SOX1-201ENST00000330949 IL1BP01584 269 aa25.55■■□□□ 1.68
SOX1-201ENST00000330949 PDK3Q15120 406 aa25.55■■□□□ 1.68
SOX1-201ENST00000330949 HSP90AA5PQ58FG0 334 aa25.55■■□□□ 1.68
SOX1-201ENST00000330949 BANPQ8N9N5 519 aa25.55■■□□□ 1.68
SOX1-201ENST00000330949 ZBTB8BQ8NAP8 495 aaPredicted RBP25.55■■□□□ 1.68
SOX1-201ENST00000330949 PRICKLE1Q96MT3 831 aaPredicted RBP25.55■■□□□ 1.68
SOX1-201ENST00000330949 S100A14Q9HCY8 104 aa25.55■■□□□ 1.68
SOX1-201ENST00000330949 TBX3O15119 743 aa25.55■■□□□ 1.68
SOX1-201ENST00000330949 CACNB3P54284 484 aa25.55■■□□□ 1.68
SOX1-201ENST00000330949 PDIA2Q13087 525 aaKnown RBP25.55■■□□□ 1.68
SOX1-201ENST00000330949 CBX3Q13185 183 aa25.55■■□□□ 1.68
SOX1-201ENST00000330949 HP1BP3Q5SSJ5 553 aaPredicted RBP25.55■■□□□ 1.68
SOX1-201ENST00000330949 GFM2Q969S9 779 aaKnown RBP25.55■■□□□ 1.68
SOX1-201ENST00000330949 SLC17A7Q9P2U7 560 aa25.55■■□□□ 1.68
SOX1-201ENST00000330949 PAIP2BQ9ULR5 123 aaKnown RBP25.55■■□□□ 1.68
SOX1-201ENST00000330949 EMSYQ7Z589 1322 aa25.54■■□□□ 1.68
SOX1-201ENST00000330949 VILLO15195 856 aa25.54■■□□□ 1.68
SOX1-201ENST00000330949 SNHG28P0DPA3 235 aa25.54■■□□□ 1.68
SOX1-201ENST00000330949 CCDC142Q17RM4 750 aa25.54■■□□□ 1.68
SOX1-201ENST00000330949 SFT2D3Q587I9 215 aa25.54■■□□□ 1.68
SOX1-201ENST00000330949 RINT1Q6NUQ1 792 aa25.54■■□□□ 1.68
SOX1-201ENST00000330949 C1orf228Q6PIY5 440 aa25.54■■□□□ 1.68
SOX1-201ENST00000330949 CENPUQ71F23 418 aa25.54■■□□□ 1.68
SOX1-201ENST00000330949 ALDH16A1Q8IZ83 802 aa25.54■■□□□ 1.68
SOX1-201ENST00000330949 CLPTM1LQ96KA5 538 aa25.54■■□□□ 1.68
SOX1-201ENST00000330949 TAGLN3Q9UI15 199 aa25.54■■□□□ 1.68
SOX1-201ENST00000330949 SH3GLB1Q9Y371 365 aa25.54■■□□□ 1.68
SOX1-201ENST00000330949 DAGLAQ9Y4D2 1042 aa25.54■■□□□ 1.68
SOX1-201ENST00000330949 DDX60LQ5H9U9 1706 aaKnown RBP25.54■■□□□ 1.68
SOX1-201ENST00000330949 FAM118BQ9BPY3 351 aa25.54■■□□□ 1.68
SOX1-201ENST00000330949 C17orf75Q9HAS0 396 aa25.54■■□□□ 1.68
SOX1-201ENST00000330949 PARVGQ9HBI0 331 aa25.54■■□□□ 1.68
SOX1-201ENST00000330949 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.53■■□□□ 1.68
SOX1-201ENST00000330949 TMED1Q13445 227 aa25.53■■□□□ 1.68
SOX1-201ENST00000330949 DCTN2Q13561 401 aaKnown RBP25.53■■□□□ 1.68
SOX1-201ENST00000330949 ANKRD20A4Q4UJ75 823 aa25.53■■□□□ 1.68
SOX1-201ENST00000330949 RBM44Q6ZP01 1051 aaKnown RBP25.53■■□□□ 1.68
SOX1-201ENST00000330949 SLC47A2Q86VL8 602 aa25.53■■□□□ 1.68
SOX1-201ENST00000330949 FBXO27Q8NI29 283 aa25.53■■□□□ 1.68
SOX1-201ENST00000330949 ANO3Q9BYT9 981 aa25.53■■□□□ 1.68
SOX1-201ENST00000330949 ALG13Q9NP73 1137 aaKnown RBP25.53■■□□□ 1.68
SOX1-201ENST00000330949 CYP26A1O43174 497 aa25.53■■□□□ 1.68
SOX1-201ENST00000330949 PGM3O95394 542 aa25.53■■□□□ 1.68
SOX1-201ENST00000330949 ALDH1B1P30837 517 aa25.53■■□□□ 1.68
SOX1-201ENST00000330949 CYP4A11Q02928 519 aa25.53■■□□□ 1.68
SOX1-201ENST00000330949 MORF4L2Q15014 288 aa25.53■■□□□ 1.68
SOX1-201ENST00000330949 TMEM221A6NGB7 291 aa25.52■■□□□ 1.68
SOX1-201ENST00000330949 C2orf71A6NGG8 1288 aa25.52■■□□□ 1.68
SOX1-201ENST00000330949 TMEM62Q0P6H9 643 aa25.52■■□□□ 1.68
SOX1-201ENST00000330949 PTP4A2Q12974 167 aa25.52■■□□□ 1.68
SOX1-201ENST00000330949 DOK7Q18PE1 504 aa25.52■■□□□ 1.68
SOX1-201ENST00000330949 ALYREFQ86V81 257 aaKnown RBP25.52■■□□□ 1.68
SOX1-201ENST00000330949 SLC9A9Q8IVB4 645 aa25.52■■□□□ 1.68
SOX1-201ENST00000330949 KCTD17Q8N5Z5 321 aa25.52■■□□□ 1.68
SOX1-201ENST00000330949 RDH13Q8NBN7 331 aa25.52■■□□□ 1.68
SOX1-201ENST00000330949 C1orf21Q9H246 121 aa25.52■■□□□ 1.68
SOX1-201ENST00000330949 USP29Q9HBJ7 922 aa25.52■■□□□ 1.68
SOX1-201ENST00000330949 KCNK4Q9NYG8 393 aa25.52■■□□□ 1.68
SOX1-201ENST00000330949 BTBD7Q9P203 1132 aa25.52■■□□□ 1.68
SOX1-201ENST00000330949 CDK4P11802 303 aa25.52■■□□□ 1.68
SOX1-201ENST00000330949 PHBP35232 272 aa25.52■■□□□ 1.68
SOX1-201ENST00000330949 LRRC36Q1X8D7 754 aa25.52■■□□□ 1.68
SOX1-201ENST00000330949 EPC2Q52LR7 807 aa25.52■■□□□ 1.68
SOX1-201ENST00000330949 PRR16Q569H4 304 aa25.52■■□□□ 1.68
SOX1-201ENST00000330949 ADGRD1Q6QNK2 874 aa25.52■■□□□ 1.68
SOX1-201ENST00000330949 TREML1Q86YW5 311 aa25.52■■□□□ 1.68
SOX1-201ENST00000330949 DIS3LQ8TF46 1054 aaKnown RBP25.52■■□□□ 1.68
SOX1-201ENST00000330949 FAM81BQ96LP2 452 aa25.52■■□□□ 1.68
SOX1-201ENST00000330949 PCDH18Q9HCL0 1135 aa25.52■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms