RNA–Protein interactions for RNA: ENST00000328736.7

PTPN21-201, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,089 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-201ENST00000328736 COLEC11Q9BWP8 271 aa16.09■□□□□ 0.17
PTPN21-201ENST00000328736 VPS33BQ9H267 617 aa16.09■□□□□ 0.17
PTPN21-201ENST00000328736 APPL1Q9UKG1 709 aa16.09■□□□□ 0.17
PTPN21-201ENST00000328736 RNF17Q9BXT8 1623 aaKnown RBP16.09■□□□□ 0.17
PTPN21-201ENST00000328736 MADDQ8WXG6 1647 aa16.09■□□□□ 0.17
PTPN21-201ENST00000328736 FAM47E-STBD1D6RA91 191 aa16.08■□□□□ 0.17
PTPN21-201ENST00000328736 EXTL3O43909 919 aa16.08■□□□□ 0.17
PTPN21-201ENST00000328736 HBP1O60381 514 aa16.08■□□□□ 0.17
PTPN21-201ENST00000328736 CDH16O75309 829 aa16.08■□□□□ 0.17
PTPN21-201ENST00000328736 EPB42P16452 691 aa16.08■□□□□ 0.17
PTPN21-201ENST00000328736 CHRM3P20309 590 aa16.08■□□□□ 0.17
PTPN21-201ENST00000328736 KLK7P49862 253 aa16.08■□□□□ 0.17
PTPN21-201ENST00000328736 ZNF543Q08ER8 600 aa16.08■□□□□ 0.17
PTPN21-201ENST00000328736 ERAP2Q6P179 960 aa16.08■□□□□ 0.17
PTPN21-201ENST00000328736 C7orf25Q9BPX7 421 aa16.08■□□□□ 0.17
PTPN21-201ENST00000328736 CCSER1Q9C0I3 900 aa16.08■□□□□ 0.17
PTPN21-201ENST00000328736 ERAP1Q9NZ08 941 aa16.08■□□□□ 0.17
PTPN21-201ENST00000328736 RSPH10B2B2RC85 870 aa16.08■□□□□ 0.17
PTPN21-201ENST00000328736 MAFGO15525 162 aa16.08■□□□□ 0.17
PTPN21-201ENST00000328736 DYRK3O43781 588 aa16.08■□□□□ 0.17
PTPN21-201ENST00000328736 PGK2P07205 417 aa16.08■□□□□ 0.17
PTPN21-201ENST00000328736 RSPH10BP0C881 870 aa16.08■□□□□ 0.17
PTPN21-201ENST00000328736 NFIXQ14938 502 aa16.08■□□□□ 0.17
PTPN21-201ENST00000328736 SPATA4Q8NEY3 305 aa16.08■□□□□ 0.17
PTPN21-201ENST00000328736 EME1Q96AY2 570 aa16.08■□□□□ 0.17
PTPN21-201ENST00000328736 SGSM3Q96HU1 749 aa16.08■□□□□ 0.17
PTPN21-201ENST00000328736 MOV10L1Q9BXT6 1211 aaKnown RBP16.08■□□□□ 0.17
PTPN21-201ENST00000328736 NYAP2Q9P242 653 aa16.08■□□□□ 0.17
PTPN21-201ENST00000328736 MAP3K13O43283 966 aa16.08■□□□□ 0.16
PTPN21-201ENST00000328736 KCTD17Q8N5Z5 321 aa16.08■□□□□ 0.16
PTPN21-201ENST00000328736 NPHS2Q9NP85 383 aa16.08■□□□□ 0.16
PTPN21-201ENST00000328736 MTO1Q9Y2Z2 717 aaKnown RBP16.08■□□□□ 0.16
PTPN21-201ENST00000328736 FHOD1Q9Y613 1164 aa16.08■□□□□ 0.16
PTPN21-201ENST00000328736 POU4F1Q01851 419 aa16.08■□□□□ 0.16
PTPN21-201ENST00000328736 PRKCEQ02156 737 aa16.08■□□□□ 0.16
PTPN21-201ENST00000328736 CENPCQ03188 943 aa16.08■□□□□ 0.16
PTPN21-201ENST00000328736 UCMAQ8WVF2 138 aa16.08■□□□□ 0.16
PTPN21-201ENST00000328736 MTMR4Q9NYA4 1195 aa16.08■□□□□ 0.16
PTPN21-201ENST00000328736 SMARCAL1Q9NZC9 954 aa16.08■□□□□ 0.16
PTPN21-201ENST00000328736 TRPC5OSA6NMA1 111 aa16.08■□□□□ 0.16
PTPN21-201ENST00000328736 ANXA9O76027 345 aa16.08■□□□□ 0.16
PTPN21-201ENST00000328736 CYP2C9P11712 490 aa16.08■□□□□ 0.16
PTPN21-201ENST00000328736 VCLP18206 1134 aa16.08■□□□□ 0.16
PTPN21-201ENST00000328736 CYP2B6P20813 491 aa16.08■□□□□ 0.16
PTPN21-201ENST00000328736 SLC11A2P49281 568 aa16.08■□□□□ 0.16
PTPN21-201ENST00000328736 CDH18Q13634 790 aa16.08■□□□□ 0.16
PTPN21-201ENST00000328736 GPRC5AQ8NFJ5 357 aa16.08■□□□□ 0.16
PTPN21-201ENST00000328736 REEP2Q9BRK0 252 aa16.08■□□□□ 0.16
PTPN21-201ENST00000328736 SPASTQ9UBP0 616 aa16.08■□□□□ 0.16
PTPN21-201ENST00000328736 NAGPAQ9UK23 515 aa16.08■□□□□ 0.16
PTPN21-201ENST00000328736 GRID1Q9ULK0 1009 aa16.08■□□□□ 0.16
PTPN21-201ENST00000328736 CDY2AQ9Y6F7 541 aa16.08■□□□□ 0.16
PTPN21-201ENST00000328736 CDY1Q9Y6F8 540 aa16.08■□□□□ 0.16
PTPN21-201ENST00000328736 TNS3Q68CZ2 1445 aa16.08■□□□□ 0.16
PTPN21-201ENST00000328736 SNRPAP09012 282 aaKnown RBP16.07■□□□□ 0.16
PTPN21-201ENST00000328736 EXOSC10Q01780 885 aaKnown RBP16.07■□□□□ 0.16
PTPN21-201ENST00000328736 C11orf96Q7Z7L8 435 aa16.07■□□□□ 0.16
PTPN21-201ENST00000328736 RNF180Q86T96 592 aa16.07■□□□□ 0.16
PTPN21-201ENST00000328736 LONP2Q86WA8 852 aa16.07■□□□□ 0.16
PTPN21-201ENST00000328736 RIBC1Q8N443 379 aaPredicted RBP16.07■□□□□ 0.16
PTPN21-201ENST00000328736 VPS50Q96JG6 964 aa16.07■□□□□ 0.16
PTPN21-201ENST00000328736 GOLPH3Q9H4A6 298 aa16.07■□□□□ 0.16
PTPN21-201ENST00000328736 TMEM8AQ9HCN3 771 aa16.07■□□□□ 0.16
PTPN21-201ENST00000328736 NFKBIL1Q9UBC1 381 aaPredicted RBP16.07■□□□□ 0.16
PTPN21-201ENST00000328736 SLC25A13Q9UJS0 675 aa16.07■□□□□ 0.16
PTPN21-201ENST00000328736 EGFRP00533 1210 aa16.07■□□□□ 0.16
PTPN21-201ENST00000328736 WEE2P0C1S8 567 aa16.07■□□□□ 0.16
PTPN21-201ENST00000328736 FAM200BP0CF97 657 aa16.07■□□□□ 0.16
PTPN21-201ENST00000328736 EFCAB12Q6NXP0 572 aa16.07■□□□□ 0.16
PTPN21-201ENST00000328736 XRRA1Q6P2D8 792 aa16.07■□□□□ 0.16
PTPN21-201ENST00000328736 F8W810 466 aa16.07■□□□□ 0.16
PTPN21-201ENST00000328736 WLSQ5T9L3 541 aa16.07■□□□□ 0.16
PTPN21-201ENST00000328736 NSUN4Q96CB9 384 aaKnown RBP16.07■□□□□ 0.16
PTPN21-201ENST00000328736 IL25Q9H293 177 aa16.07■□□□□ 0.16
PTPN21-201ENST00000328736 WWOXQ9NZC7 414 aa16.07■□□□□ 0.16
PTPN21-201ENST00000328736 SNX12Q9UMY4 172 aa16.07■□□□□ 0.16
PTPN21-201ENST00000328736 EIF3LQ9Y262 564 aaKnown RBP16.07■□□□□ 0.16
PTPN21-201ENST00000328736 ETFBP38117 255 aa16.07■□□□□ 0.16
PTPN21-201ENST00000328736 DCAF6Q58WW2 860 aa16.07■□□□□ 0.16
PTPN21-201ENST00000328736 CDR2LQ86X02 465 aaPredicted RBP16.07■□□□□ 0.16
PTPN21-201ENST00000328736 NUDT12Q9BQG2 462 aa16.07■□□□□ 0.16
PTPN21-201ENST00000328736 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.07■□□□□ 0.16
PTPN21-201ENST00000328736 SSU72P8A0A1W2PR75 194 aa16.07■□□□□ 0.16
PTPN21-201ENST00000328736 GUCA1AP43080 201 aaPredicted RBP16.07■□□□□ 0.16
PTPN21-201ENST00000328736 ZNF177Q13360 481 aaPredicted RBP16.07■□□□□ 0.16
PTPN21-201ENST00000328736 TERF2Q15554 542 aa16.07■□□□□ 0.16
PTPN21-201ENST00000328736 TRIP4Q15650 581 aaPredicted RBP16.07■□□□□ 0.16
PTPN21-201ENST00000328736 ZNF438Q7Z4V0 828 aa16.07■□□□□ 0.16
PTPN21-201ENST00000328736 P3H2Q8IVL5 708 aa16.07■□□□□ 0.16
PTPN21-201ENST00000328736 MED14O60244 1454 aa16.06■□□□□ 0.16
PTPN21-201ENST00000328736 WBP4O75554 376 aaKnown RBP16.06■□□□□ 0.16
PTPN21-201ENST00000328736 NR3C2P08235 984 aa16.06■□□□□ 0.16
PTPN21-201ENST00000328736 CYP2C8P10632 490 aa16.06■□□□□ 0.16
PTPN21-201ENST00000328736 TAF6P49848 677 aa16.06■□□□□ 0.16
PTPN21-201ENST00000328736 POLD3Q15054 466 aaPredicted RBP16.06■□□□□ 0.16
PTPN21-201ENST00000328736 ZNF513Q8N8E2 541 aaPredicted RBP16.06■□□□□ 0.16
PTPN21-201ENST00000328736 C17orf102A2RUQ5 167 aa16.06■□□□□ 0.16
PTPN21-201ENST00000328736 FAM47DPA6NHR8 397 aa16.06■□□□□ 0.16
PTPN21-201ENST00000328736 SNTNA6NMZ2 147 aa16.06■□□□□ 0.16
PTPN21-201ENST00000328736 P4HA2O15460 535 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms