RNA–Protein interactions for RNA: ENST00000327359.7

BRF1-201, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2 BASIC

Gene BRF1, Length 2,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-201ENST00000327359 C19orf81C9J6K1 198 aa16.9■□□□□ 0.3
BRF1-201ENST00000327359 P4HA2O15460 535 aa16.9■□□□□ 0.3
BRF1-201ENST00000327359 ZSCAN9O15535 394 aaPredicted RBP16.9■□□□□ 0.3
BRF1-201ENST00000327359 USP2O75604 605 aaPredicted RBP16.9■□□□□ 0.3
BRF1-201ENST00000327359 KRT15P19012 456 aa16.9■□□□□ 0.3
BRF1-201ENST00000327359 CA4P22748 312 aa16.9■□□□□ 0.3
BRF1-201ENST00000327359 DYNC1I2Q13409 638 aaKnown RBP16.9■□□□□ 0.3
BRF1-201ENST00000327359 RCN2Q14257 317 aa16.9■□□□□ 0.3
BRF1-201ENST00000327359 RCN1Q15293 331 aa16.9■□□□□ 0.3
BRF1-201ENST00000327359 SUPT20HL1Q3ZLR7 823 aa16.9■□□□□ 0.3
BRF1-201ENST00000327359 SLC45A4Q5BKX6 768 aa16.9■□□□□ 0.3
BRF1-201ENST00000327359 HP1BP3Q5SSJ5 553 aaPredicted RBP16.9■□□□□ 0.3
BRF1-201ENST00000327359 ANKRD23Q86SG2 305 aa16.9■□□□□ 0.3
BRF1-201ENST00000327359 PHLDB2Q86SQ0 1253 aa16.9■□□□□ 0.3
BRF1-201ENST00000327359 DAW1Q8N136 415 aa16.9■□□□□ 0.3
BRF1-201ENST00000327359 REPS2Q8NFH8 660 aa16.9■□□□□ 0.3
BRF1-201ENST00000327359 MAIP1Q8WWC4 291 aa16.9■□□□□ 0.3
BRF1-201ENST00000327359 TRIM4Q9C037 500 aa16.9■□□□□ 0.3
BRF1-201ENST00000327359 TMEM117Q9H0C3 514 aa16.9■□□□□ 0.3
BRF1-201ENST00000327359 SAYSD1Q9NPB0 183 aa16.9■□□□□ 0.3
BRF1-201ENST00000327359 MAP3K20Q9NYL2 800 aaKnown RBP16.9■□□□□ 0.3
BRF1-201ENST00000327359 TCEAL9Q9UHQ7 104 aa16.9■□□□□ 0.3
BRF1-201ENST00000327359 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.9■□□□□ 0.3
BRF1-201ENST00000327359 COL11A1P12107 1806 aaPredicted RBP16.9■□□□□ 0.3
BRF1-201ENST00000327359 SSC5DA1L4H1 1573 aa16.9■□□□□ 0.3
BRF1-201ENST00000327359 K7ENM7 598 aa16.9■□□□□ 0.3
BRF1-201ENST00000327359 C2CD2LO14523 706 aa16.9■□□□□ 0.3
BRF1-201ENST00000327359 CALCAP01258 141 aa16.9■□□□□ 0.3
BRF1-201ENST00000327359 RALAP11233 206 aa16.9■□□□□ 0.3
BRF1-201ENST00000327359 NR1H3Q13133 447 aa16.9■□□□□ 0.3
BRF1-201ENST00000327359 KLF1Q13351 362 aaPredicted RBP16.9■□□□□ 0.3
BRF1-201ENST00000327359 CCDC6Q16204 474 aa16.9■□□□□ 0.3
BRF1-201ENST00000327359 UGCGQ16739 394 aa16.9■□□□□ 0.3
BRF1-201ENST00000327359 P3H1Q32P28 736 aa16.9■□□□□ 0.3
BRF1-201ENST00000327359 SPDYAQ5MJ70 313 aa16.9■□□□□ 0.3
BRF1-201ENST00000327359 SNX30Q5VWJ9 437 aa16.9■□□□□ 0.3
BRF1-201ENST00000327359 CATSPERGQ6ZRH7 1159 aa16.9■□□□□ 0.3
BRF1-201ENST00000327359 CLNKQ7Z7G1 428 aa16.9■□□□□ 0.3
BRF1-201ENST00000327359 SHC3Q92529 594 aa16.9■□□□□ 0.3
BRF1-201ENST00000327359 ELMO3Q96BJ8 720 aa16.9■□□□□ 0.3
BRF1-201ENST00000327359 DDX27Q96GQ7 796 aaKnown RBP16.9■□□□□ 0.3
BRF1-201ENST00000327359 PLEKHG4BQ96PX9 1271 aa16.9■□□□□ 0.3
BRF1-201ENST00000327359 SMC6Q96SB8 1091 aa16.9■□□□□ 0.3
BRF1-201ENST00000327359 FHDC1Q9C0D6 1143 aaPredicted RBP16.9■□□□□ 0.3
BRF1-201ENST00000327359 ZNF214Q9UL59 606 aaPredicted RBP16.9■□□□□ 0.3
BRF1-201ENST00000327359 LRCH1Q9Y2L9 728 aa16.9■□□□□ 0.3
BRF1-201ENST00000327359 KRT36O76013 467 aa16.89■□□□□ 0.29
BRF1-201ENST00000327359 FDX1P10109 184 aa16.89■□□□□ 0.29
BRF1-201ENST00000327359 ADSSP30520 456 aa16.89■□□□□ 0.29
BRF1-201ENST00000327359 QARSP47897 775 aaKnown RBP16.89■□□□□ 0.29
BRF1-201ENST00000327359 MXI1P50539 228 aa16.89■□□□□ 0.29
BRF1-201ENST00000327359 CENPCQ03188 943 aa16.89■□□□□ 0.29
BRF1-201ENST00000327359 FASTKD3Q14CZ7 662 aaKnown RBP16.89■□□□□ 0.29
BRF1-201ENST00000327359 ACAD10Q6JQN1 1059 aa16.89■□□□□ 0.29
BRF1-201ENST00000327359 CAPN12Q6ZSI9 719 aa16.89■□□□□ 0.29
BRF1-201ENST00000327359 ZCCHC9Q8N567 271 aaKnown RBP16.89■□□□□ 0.29
BRF1-201ENST00000327359 CCDC89Q8N998 374 aa16.89■□□□□ 0.29
BRF1-201ENST00000327359 SCG3Q8WXD2 468 aaKnown RBP16.89■□□□□ 0.29
BRF1-201ENST00000327359 KIFAP3Q92845 792 aa16.89■□□□□ 0.29
BRF1-201ENST00000327359 SEMA4DQ92854 862 aa16.89■□□□□ 0.29
BRF1-201ENST00000327359 MRRFQ96E11 262 aaKnown RBP16.89■□□□□ 0.29
BRF1-201ENST00000327359 CFAP57Q96MR6 1250 aa16.89■□□□□ 0.29
BRF1-201ENST00000327359 VCXQ9H320 206 aa16.89■□□□□ 0.29
BRF1-201ENST00000327359 METTL5Q9NRN9 209 aaKnown RBP16.89■□□□□ 0.29
BRF1-201ENST00000327359 KANSL3Q9P2N6 904 aa16.89■□□□□ 0.29
BRF1-201ENST00000327359 SMG5Q9UPR3 1016 aaKnown RBP16.89■□□□□ 0.29
BRF1-201ENST00000327359 AFG3L2Q9Y4W6 797 aa16.89■□□□□ 0.29
BRF1-201ENST00000327359 A0A1W2PPM1 405 aa16.89■□□□□ 0.29
BRF1-201ENST00000327359 ADM5C9JUS6 153 aa16.89■□□□□ 0.29
BRF1-201ENST00000327359 NR3C2P08235 984 aa16.89■□□□□ 0.29
BRF1-201ENST00000327359 KLRC2P26717 231 aa16.89■□□□□ 0.29
BRF1-201ENST00000327359 SLC18A1P54219 525 aa16.89■□□□□ 0.29
BRF1-201ENST00000327359 SP4Q02446 784 aa16.89■□□□□ 0.29
BRF1-201ENST00000327359 ACSBG2Q5FVE4 666 aa16.89■□□□□ 0.29
BRF1-201ENST00000327359 LLGL2Q6P1M3 1020 aa16.89■□□□□ 0.29
BRF1-201ENST00000327359 BBOF1Q8ND07 529 aa16.89■□□□□ 0.29
BRF1-201ENST00000327359 DDX1Q92499 740 aaKnown RBP16.89■□□□□ 0.29
BRF1-201ENST00000327359 ZNF75CPQ92670 426 aaPredicted RBP16.89■□□□□ 0.29
BRF1-201ENST00000327359 C12orf42Q96LP6 360 aa16.89■□□□□ 0.29
BRF1-201ENST00000327359 TBC1D22BQ9NU19 505 aa16.89■□□□□ 0.29
BRF1-201ENST00000327359 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.89■□□□□ 0.29
BRF1-201ENST00000327359 RNF181Q9P0P0 153 aa16.89■□□□□ 0.29
BRF1-201ENST00000327359 PCDHGA4Q9Y5G9 962 aa16.89■□□□□ 0.29
BRF1-201ENST00000327359 TYROBPO43914 113 aa16.88■□□□□ 0.29
BRF1-201ENST00000327359 GRIN3BO60391 1043 aa16.88■□□□□ 0.29
BRF1-201ENST00000327359 CCNE2O96020 404 aa16.88■□□□□ 0.29
BRF1-201ENST00000327359 MYBPC2Q14324 1141 aa16.88■□□□□ 0.29
BRF1-201ENST00000327359 MAPK6Q16659 721 aa16.88■□□□□ 0.29
BRF1-201ENST00000327359 LVRNQ6Q4G3 990 aa16.88■□□□□ 0.29
BRF1-201ENST00000327359 TDRPQ86YL5 185 aa16.88■□□□□ 0.29
BRF1-201ENST00000327359 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.88■□□□□ 0.29
BRF1-201ENST00000327359 DHX38Q92620 1227 aaKnown RBP16.88■□□□□ 0.29
BRF1-201ENST00000327359 SAR1AQ9NR31 198 aa16.88■□□□□ 0.29
BRF1-201ENST00000327359 SCOCQ9UIL1 159 aa16.88■□□□□ 0.29
BRF1-201ENST00000327359 DCTN4Q9UJW0 460 aa16.88■□□□□ 0.29
BRF1-201ENST00000327359 PARP14Q460N5 1801 aa16.88■□□□□ 0.29
BRF1-201ENST00000327359 PHIPQ8WWQ0 1821 aa16.88■□□□□ 0.29
BRF1-201ENST00000327359 A0A1B0GVG6 124 aa16.87■□□□□ 0.29
BRF1-201ENST00000327359 SMAPO00193 183 aa16.87■□□□□ 0.29
BRF1-201ENST00000327359 PLS3P13797 630 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms