RNA–Protein interactions for RNA: ENST00000326956.11

SSBP3-201, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 2,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-201ENST00000326956 AGTPBP1Q9UPW5 1226 aa15.38■□□□□ 0.05
SSBP3-201ENST00000326956 DRG1Q9Y295 367 aaKnown RBP15.38■□□□□ 0.05
SSBP3-201ENST00000326956 UBIAD1Q9Y5Z9 338 aa15.38■□□□□ 0.05
SSBP3-201ENST00000326956 BANF1O75531 89 aa15.38■□□□□ 0.05
SSBP3-201ENST00000326956 SFNP31947 248 aa15.38■□□□□ 0.05
SSBP3-201ENST00000326956 KHDC1Q4VXA5 237 aaKnown RBP15.38■□□□□ 0.05
SSBP3-201ENST00000326956 CMPK2Q5EBM0 449 aa15.38■□□□□ 0.05
SSBP3-201ENST00000326956 DRICH1Q6PGQ1 229 aaPredicted RBP15.38■□□□□ 0.05
SSBP3-201ENST00000326956 SLC30A9Q6PML9 568 aa15.38■□□□□ 0.05
SSBP3-201ENST00000326956 SPOCD1Q6ZMY3 1216 aa15.38■□□□□ 0.05
SSBP3-201ENST00000326956 C3orf62Q6ZUJ4 267 aa15.38■□□□□ 0.05
SSBP3-201ENST00000326956 NLRX1Q86UT6 975 aa15.38■□□□□ 0.05
SSBP3-201ENST00000326956 TCP10LQ8TDR4 215 aa15.38■□□□□ 0.05
SSBP3-201ENST00000326956 ALKBH8Q96BT7 664 aaKnown RBP15.38■□□□□ 0.05
SSBP3-201ENST00000326956 NSL1Q96IY1 281 aa15.38■□□□□ 0.05
SSBP3-201ENST00000326956 KLF6Q99612 283 aaPredicted RBP15.38■□□□□ 0.05
SSBP3-201ENST00000326956 TSSK1BQ9BXA7 367 aa15.38■□□□□ 0.05
SSBP3-201ENST00000326956 PCDH9Q9HC56 1237 aa15.38■□□□□ 0.05
SSBP3-201ENST00000326956 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.38■□□□□ 0.05
SSBP3-201ENST00000326956 USP21Q9UK80 565 aa15.38■□□□□ 0.05
SSBP3-201ENST00000326956 CTDP1Q9Y5B0 961 aaPredicted RBP15.38■□□□□ 0.05
SSBP3-201ENST00000326956 ZNFX1Q9P2E3 1918 aaKnown RBP15.38■□□□□ 0.05
SSBP3-201ENST00000326956 TESPA1A2RU30 521 aaPredicted RBP15.37■□□□□ 0.05
SSBP3-201ENST00000326956 ICAM1P05362 532 aa15.37■□□□□ 0.05
SSBP3-201ENST00000326956 CFHP08603 1231 aa15.37■□□□□ 0.05
SSBP3-201ENST00000326956 ESRRAP11474 423 aaPredicted RBP15.37■□□□□ 0.05
SSBP3-201ENST00000326956 SSTR1P30872 391 aa15.37■□□□□ 0.05
SSBP3-201ENST00000326956 KRT76Q01546 638 aa15.37■□□□□ 0.05
SSBP3-201ENST00000326956 CUL2Q13617 745 aa15.37■□□□□ 0.05
SSBP3-201ENST00000326956 TFDP1Q14186 410 aa15.37■□□□□ 0.05
SSBP3-201ENST00000326956 EFHC2Q5JST6 749 aa15.37■□□□□ 0.05
SSBP3-201ENST00000326956 RNASEH2BQ5TBB1 312 aaKnown RBP15.37■□□□□ 0.05
SSBP3-201ENST00000326956 DNAJC24Q6P3W2 148 aa15.37■□□□□ 0.05
SSBP3-201ENST00000326956 PHF13Q86YI8 300 aaPredicted RBP15.37■□□□□ 0.05
SSBP3-201ENST00000326956 RHPN2Q8IUC4 686 aa15.37■□□□□ 0.05
SSBP3-201ENST00000326956 TAB3Q8N5C8 712 aaPredicted RBP15.37■□□□□ 0.05
SSBP3-201ENST00000326956 SPIRE2Q8WWL2 714 aa15.37■□□□□ 0.05
SSBP3-201ENST00000326956 PAFAH2Q99487 392 aa15.37■□□□□ 0.05
SSBP3-201ENST00000326956 PPP1R12CQ9BZL4 782 aa15.37■□□□□ 0.05
SSBP3-201ENST00000326956 SSU72Q9NP77 194 aaKnown RBP15.37■□□□□ 0.05
SSBP3-201ENST00000326956 DLGAP2Q9P1A6 1054 aa15.37■□□□□ 0.05
SSBP3-201ENST00000326956 SCOCQ9UIL1 159 aa15.37■□□□□ 0.05
SSBP3-201ENST00000326956 IVNS1ABPQ9Y6Y0 642 aa15.37■□□□□ 0.05
SSBP3-201ENST00000326956 LTBP1Q14766 1721 aa15.37■□□□□ 0.05
SSBP3-201ENST00000326956 CLRN2A0PK11 232 aa15.37■□□□□ 0.05
SSBP3-201ENST00000326956 MT-ND3P03897 115 aa15.37■□□□□ 0.05
SSBP3-201ENST00000326956 RPL7AP62424 266 aaKnown RBP15.37■□□□□ 0.05
SSBP3-201ENST00000326956 RASA2Q15283 850 aa15.37■□□□□ 0.05
SSBP3-201ENST00000326956 RBBP5Q15291 538 aaKnown RBP15.37■□□□□ 0.05
SSBP3-201ENST00000326956 THEMIS2Q5TEJ8 643 aa15.37■□□□□ 0.05
SSBP3-201ENST00000326956 SNX30Q5VWJ9 437 aa15.37■□□□□ 0.05
SSBP3-201ENST00000326956 RFWD2Q8NHY2 731 aa15.37■□□□□ 0.05
SSBP3-201ENST00000326956 ACSF2Q96CM8 615 aaPredicted RBP15.37■□□□□ 0.05
SSBP3-201ENST00000326956 MASTLQ96GX5 879 aa15.37■□□□□ 0.05
SSBP3-201ENST00000326956 CADM1Q9BY67 442 aaKnown RBP15.37■□□□□ 0.05
SSBP3-201ENST00000326956 C17orf75Q9HAS0 396 aa15.37■□□□□ 0.05
SSBP3-201ENST00000326956 NMRK1Q9NWW6 199 aa15.37■□□□□ 0.05
SSBP3-201ENST00000326956 ZNF536O15090 1300 aa15.37■□□□□ 0.05
SSBP3-201ENST00000326956 RBBP6Q7Z6E9 1792 aaKnown RBP15.37■□□□□ 0.05
SSBP3-201ENST00000326956 EME2A4GXA9 379 aaPredicted RBP15.37■□□□□ 0.05
SSBP3-201ENST00000326956 TM9SF1O15321 606 aa15.37■□□□□ 0.05
SSBP3-201ENST00000326956 DYNLT1P63172 113 aa15.37■□□□□ 0.05
SSBP3-201ENST00000326956 MRPS9P82933 396 aaKnown RBP15.37■□□□□ 0.05
SSBP3-201ENST00000326956 RCN2Q14257 317 aa15.37■□□□□ 0.05
SSBP3-201ENST00000326956 BBS9Q3SYG4 887 aa15.37■□□□□ 0.05
SSBP3-201ENST00000326956 RFWD3Q6PCD5 774 aa15.37■□□□□ 0.05
SSBP3-201ENST00000326956 ARHGAP24Q8N264 748 aa15.37■□□□□ 0.05
SSBP3-201ENST00000326956 TEKT4Q8WW24 435 aa15.37■□□□□ 0.05
SSBP3-201ENST00000326956 BSNDQ8WZ55 320 aa15.37■□□□□ 0.05
SSBP3-201ENST00000326956 ZNF516Q92618 1163 aa15.37■□□□□ 0.05
SSBP3-201ENST00000326956 LBHD1Q9BQE6 289 aaPredicted RBP15.37■□□□□ 0.05
SSBP3-201ENST00000326956 TLE6Q9H808 572 aa15.37■□□□□ 0.05
SSBP3-201ENST00000326956 LRRC37AA6NMS7 1700 aa15.37■□□□□ 0.05
SSBP3-201ENST00000326956 AHCYL1O43865 530 aa15.36■□□□□ 0.05
SSBP3-201ENST00000326956 EXTL3O43909 919 aa15.36■□□□□ 0.05
SSBP3-201ENST00000326956 ZBED4O75132 1171 aa15.36■□□□□ 0.05
SSBP3-201ENST00000326956 LBRQ14739 615 aaKnown RBP15.36■□□□□ 0.05
SSBP3-201ENST00000326956 TFDP3Q5H9I0 405 aa15.36■□□□□ 0.05
SSBP3-201ENST00000326956 RSAD2Q8WXG1 361 aa15.36■□□□□ 0.05
SSBP3-201ENST00000326956 MCEEQ96PE7 176 aa15.36■□□□□ 0.05
SSBP3-201ENST00000326956 IMPG2Q9BZV3 1241 aa15.36■□□□□ 0.05
SSBP3-201ENST00000326956 VPS11Q9H270 941 aa15.36■□□□□ 0.05
SSBP3-201ENST00000326956 CYLDQ9NQC7 956 aa15.36■□□□□ 0.05
SSBP3-201ENST00000326956 ARL8BQ9NVJ2 186 aa15.36■□□□□ 0.05
SSBP3-201ENST00000326956 LRCH1Q9Y2L9 728 aa15.36■□□□□ 0.05
SSBP3-201ENST00000326956 CAPN9O14815 690 aa15.36■□□□□ 0.05
SSBP3-201ENST00000326956 LPXNO60711 386 aa15.36■□□□□ 0.05
SSBP3-201ENST00000326956 PLA2G6O60733 806 aa15.36■□□□□ 0.05
SSBP3-201ENST00000326956 PIAS1O75925 651 aa15.36■□□□□ 0.05
SSBP3-201ENST00000326956 FGFR1P11362 822 aa15.36■□□□□ 0.05
SSBP3-201ENST00000326956 TCF4P15884 667 aa15.36■□□□□ 0.05
SSBP3-201ENST00000326956 GLRA2P23416 452 aa15.36■□□□□ 0.05
SSBP3-201ENST00000326956 ACOT2P49753 483 aa15.36■□□□□ 0.05
SSBP3-201ENST00000326956 MCCD1P59942 119 aaPredicted RBP15.36■□□□□ 0.05
SSBP3-201ENST00000326956 EFTUD2Q15029 972 aaKnown RBP eCLIP15.36■□□□□ 0.054e-7■■■■■ 33.6
SSBP3-201ENST00000326956 ZACNQ401N2 412 aa15.36■□□□□ 0.05
SSBP3-201ENST00000326956 IRGCQ6NXR0 463 aa15.36■□□□□ 0.05
SSBP3-201ENST00000326956 DSTYKQ6XUX3 929 aa15.36■□□□□ 0.05
SSBP3-201ENST00000326956 ZC3H18Q86VM9 953 aaKnown RBP15.36■□□□□ 0.05
SSBP3-201ENST00000326956 PPIL6Q8IXY8 311 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms