RNA–Protein interactions for RNA: ENST00000324771.12

DDR1-223, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-223ENST00000324771 PJA2O43164 708 aa12.43□□□□□ -0.42
DDR1-223ENST00000324771 USP2O75604 605 aaPredicted RBP12.43□□□□□ -0.42
DDR1-223ENST00000324771 TGFB3P10600 412 aa12.43□□□□□ -0.42
DDR1-223ENST00000324771 MAGEA4P43358 317 aa12.43□□□□□ -0.42
DDR1-223ENST00000324771 SULT1E1P49888 294 aa12.43□□□□□ -0.42
DDR1-223ENST00000324771 NDST1P52848 882 aa12.43□□□□□ -0.42
DDR1-223ENST00000324771 RPL7AP62424 266 aaKnown RBP12.43□□□□□ -0.42
DDR1-223ENST00000324771 PTPN11Q06124 597 aaPredicted RBP12.43□□□□□ -0.42
DDR1-223ENST00000324771 SPIRE1Q08AE8 756 aa12.43□□□□□ -0.42
DDR1-223ENST00000324771 PIGHQ14442 188 aaPredicted RBP12.43□□□□□ -0.42
DDR1-223ENST00000324771 MAP7D1Q3KQU3 841 aa12.43□□□□□ -0.42
DDR1-223ENST00000324771 MFSD7Q6UXD7 560 aa12.43□□□□□ -0.42
DDR1-223ENST00000324771 C3orf62Q6ZUJ4 267 aa12.43□□□□□ -0.42
DDR1-223ENST00000324771 TGS1Q96RS0 853 aaKnown RBP12.43□□□□□ -0.42
DDR1-223ENST00000324771 PCDHB18PQ96TA0 734 aa12.43□□□□□ -0.42
DDR1-223ENST00000324771 TSR3Q9UJK0 312 aaKnown RBP12.43□□□□□ -0.42
DDR1-223ENST00000324771 STAP1Q9ULZ2 295 aa12.43□□□□□ -0.42
DDR1-223ENST00000324771 PCDHGC5Q9Y5F6 944 aa12.43□□□□□ -0.42
DDR1-223ENST00000324771 NUP98P52948 1817 aa12.42□□□□□ -0.42
DDR1-223ENST00000324771 COPEO14579 308 aa12.42□□□□□ -0.42
DDR1-223ENST00000324771 GTF2A2P52657 109 aa12.42□□□□□ -0.42
DDR1-223ENST00000324771 OTUD4Q01804 1114 aaKnown RBP12.42□□□□□ -0.42
DDR1-223ENST00000324771 FSTL1Q12841 308 aa12.42□□□□□ -0.42
DDR1-223ENST00000324771 GRIK4Q16099 956 aa12.42□□□□□ -0.42
DDR1-223ENST00000324771 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.42□□□□□ -0.42
DDR1-223ENST00000324771 SMC1BQ8NDV3 1235 aa12.42□□□□□ -0.42
DDR1-223ENST00000324771 SLC7A14Q8TBB6 771 aa12.42□□□□□ -0.42
DDR1-223ENST00000324771 ACTRT1Q8TDG2 376 aa12.42□□□□□ -0.42
DDR1-223ENST00000324771 PPP4R1Q8TF05 950 aa12.42□□□□□ -0.42
DDR1-223ENST00000324771 MARCOQ9UEW3 520 aaPredicted RBP12.42□□□□□ -0.42
DDR1-223ENST00000324771 UMODL1Q5DID0 1318 aa12.42□□□□□ -0.42
DDR1-223ENST00000324771 H0Y3Z8 333 aa12.42□□□□□ -0.42
DDR1-223ENST00000324771 LGALS2P05162 132 aa12.42□□□□□ -0.42
DDR1-223ENST00000324771 NFICP08651 508 aa12.42□□□□□ -0.42
DDR1-223ENST00000324771 MAPTP10636 758 aaKnown RBP12.42□□□□□ -0.42
DDR1-223ENST00000324771 ARL13BQ3SXY8 428 aa12.42□□□□□ -0.42
DDR1-223ENST00000324771 JADE1Q6IE81 842 aa12.42□□□□□ -0.42
DDR1-223ENST00000324771 NOTUMQ6P988 496 aa12.42□□□□□ -0.42
DDR1-223ENST00000324771 HIPK4Q8NE63 616 aa12.42□□□□□ -0.42
DDR1-223ENST00000324771 ADAM32Q8TC27 787 aa12.42□□□□□ -0.42
DDR1-223ENST00000324771 RXFP2Q8WXD0 754 aa12.42□□□□□ -0.42
DDR1-223ENST00000324771 TNIP3Q96KP6 325 aa12.42□□□□□ -0.42
DDR1-223ENST00000324771 TTYH3Q9C0H2 523 aa12.42□□□□□ -0.42
DDR1-223ENST00000324771 TMEM120BA0PK00 339 aa12.42□□□□□ -0.42
DDR1-223ENST00000324771 FRMD3A2A2Y4 597 aa12.42□□□□□ -0.42
DDR1-223ENST00000324771 CASTOR2A6NHX0 329 aa12.42□□□□□ -0.42
DDR1-223ENST00000324771 PROSCO94903 275 aa12.42□□□□□ -0.42
DDR1-223ENST00000324771 SNRPFP62306 86 aaKnown RBP12.42□□□□□ -0.42
DDR1-223ENST00000324771 FMO1Q01740 532 aa12.42□□□□□ -0.42
DDR1-223ENST00000324771 SPARCL1Q14515 664 aa12.42□□□□□ -0.42
DDR1-223ENST00000324771 RFX8Q6ZV50 586 aa12.42□□□□□ -0.42
DDR1-223ENST00000324771 CFAP61Q8NHU2 1237 aa12.42□□□□□ -0.42
DDR1-223ENST00000324771 LENG1Q96BZ8 264 aaPredicted RBP12.42□□□□□ -0.42
DDR1-223ENST00000324771 CHMP6Q96FZ7 201 aa12.42□□□□□ -0.42
DDR1-223ENST00000324771 ZNF560Q96MR9 790 aa12.42□□□□□ -0.42
DDR1-223ENST00000324771 SMYD3Q9H7B4 428 aa12.42□□□□□ -0.42
DDR1-223ENST00000324771 XPO7Q9UIA9 1087 aaKnown RBP12.42□□□□□ -0.42
DDR1-223ENST00000324771 TELO2Q9Y4R8 837 aa12.42□□□□□ -0.42
DDR1-223ENST00000324771 CASZ1Q86V15 1759 aa12.42□□□□□ -0.42
DDR1-223ENST00000324771 MYH14Q7Z406 1995 aaKnown RBP12.42□□□□□ -0.42
DDR1-223ENST00000324771 A0A087WUV0 522 aaPredicted RBP12.41□□□□□ -0.42
DDR1-223ENST00000324771 EIF4E1BA6NMX2 242 aaKnown RBP12.41□□□□□ -0.42
DDR1-223ENST00000324771 SPATA31C2B4DYI2 1134 aa12.41□□□□□ -0.42
DDR1-223ENST00000324771 DFFAO00273 331 aa12.41□□□□□ -0.42
DDR1-223ENST00000324771 APOL1O14791 398 aa12.41□□□□□ -0.42
DDR1-223ENST00000324771 CST3P01034 146 aaPredicted RBP12.41□□□□□ -0.42
DDR1-223ENST00000324771 GSTA1P08263 222 aa12.41□□□□□ -0.42
DDR1-223ENST00000324771 GSTA2P09210 222 aa12.41□□□□□ -0.42
DDR1-223ENST00000324771 ITIH2P19823 946 aa12.41□□□□□ -0.42
DDR1-223ENST00000324771 RPL21P46778 160 aaKnown RBP12.41□□□□□ -0.42
DDR1-223ENST00000324771 RAET1EQ8TD07 263 aa12.41□□□□□ -0.42
DDR1-223ENST00000324771 BHMTQ93088 406 aa12.41□□□□□ -0.42
DDR1-223ENST00000324771 PGBD4Q96DM1 585 aa12.41□□□□□ -0.42
DDR1-223ENST00000324771 DDX23Q9BUQ8 820 aaKnown RBP12.41□□□□□ -0.42
DDR1-223ENST00000324771 TRABDQ9H4I3 376 aa12.41□□□□□ -0.42
DDR1-223ENST00000324771 FGFR1OP2Q9NVK5 253 aa12.41□□□□□ -0.42
DDR1-223ENST00000324771 DDX56Q9NY93 547 aaKnown RBP12.41□□□□□ -0.42
DDR1-223ENST00000324771 ZNF214Q9UL59 606 aaPredicted RBP12.41□□□□□ -0.42
DDR1-223ENST00000324771 ACKR2O00590 384 aa12.41□□□□□ -0.42
DDR1-223ENST00000324771 EIF3HO15372 352 aaKnown RBP eCLIP12.41□□□□□ -0.425e-6■■■□□ 14.9
DDR1-223ENST00000324771 CPB1P15086 417 aa12.41□□□□□ -0.42
DDR1-223ENST00000324771 GRIK1P39086 918 aa12.41□□□□□ -0.42
DDR1-223ENST00000324771 PRKCIP41743 596 aa12.41□□□□□ -0.42
DDR1-223ENST00000324771 EFHC2Q5JST6 749 aa12.41□□□□□ -0.42
DDR1-223ENST00000324771 MYLK4Q86YV6 388 aaPredicted RBP12.41□□□□□ -0.42
DDR1-223ENST00000324771 RNF135Q8IUD6 432 aa12.41□□□□□ -0.42
DDR1-223ENST00000324771 RIOX2Q8IUF8 465 aa12.41□□□□□ -0.42
DDR1-223ENST00000324771 APOL2Q9BQE5 337 aa12.41□□□□□ -0.42
DDR1-223ENST00000324771 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.41□□□□□ -0.429e-7■■■■□ 21.1
DDR1-223ENST00000324771 NR2E1Q9Y466 385 aa12.41□□□□□ -0.42
DDR1-223ENST00000324771 TRPM3Q9HCF6 1732 aaPredicted RBP12.41□□□□□ -0.42
DDR1-223ENST00000324771 IL18RAPO95256 599 aa12.41□□□□□ -0.42
DDR1-223ENST00000324771 POMCP01189 267 aa12.41□□□□□ -0.42
DDR1-223ENST00000324771 ETS1P14921 441 aa12.41□□□□□ -0.42
DDR1-223ENST00000324771 GPD1P21695 349 aa12.41□□□□□ -0.42
DDR1-223ENST00000324771 HNRNPH3P31942 346 aaKnown RBP12.41□□□□□ -0.42
DDR1-223ENST00000324771 OAZ1P54368 228 aa12.41□□□□□ -0.42
DDR1-223ENST00000324771 TSPY1Q01534 308 aa12.41□□□□□ -0.42
DDR1-223ENST00000324771 PPP1R36Q96LQ0 422 aa12.41□□□□□ -0.42
DDR1-223ENST00000324771 CDC42EP4Q9H3Q1 356 aaKnown RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms