RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 UPP1Q16831 310 aa13.58□□□□□ -0.24
DDX39A-202ENST00000324340 SV2CQ496J9 727 aa13.58□□□□□ -0.24
DDX39A-202ENST00000324340 CLLU1OSQ5K130 101 aa13.58□□□□□ -0.24
DDX39A-202ENST00000324340 ALKBH5Q6P6C2 394 aaKnown RBP13.58□□□□□ -0.24
DDX39A-202ENST00000324340 CNKSR3Q6P9H4 555 aa13.58□□□□□ -0.24
DDX39A-202ENST00000324340 GLB1LQ6UWU2 654 aa13.58□□□□□ -0.24
DDX39A-202ENST00000324340 SCARA5Q6ZMJ2 495 aa13.58□□□□□ -0.24
DDX39A-202ENST00000324340 DPH6Q7L8W6 267 aa13.58□□□□□ -0.24
DDX39A-202ENST00000324340 SPATS2Q86XZ4 545 aaKnown RBP13.58□□□□□ -0.24
DDX39A-202ENST00000324340 RPUSD2Q8IZ73 545 aaKnown RBP13.58□□□□□ -0.24
DDX39A-202ENST00000324340 ATRIPQ8WXE1 791 aa13.58□□□□□ -0.24
DDX39A-202ENST00000324340 TRIM43Q96BQ3 446 aaPredicted RBP13.58□□□□□ -0.24
DDX39A-202ENST00000324340 DDX27Q96GQ7 796 aaKnown RBP13.58□□□□□ -0.24
DDX39A-202ENST00000324340 UROC1Q96N76 676 aa13.58□□□□□ -0.24
DDX39A-202ENST00000324340 LUC7LQ9NQ29 371 aaKnown RBP13.58□□□□□ -0.24
DDX39A-202ENST00000324340 KANSL3Q9P2N6 904 aa13.58□□□□□ -0.24
DDX39A-202ENST00000324340 INTUQ9ULD6 942 aa13.58□□□□□ -0.24
DDX39A-202ENST00000324340 SNX9Q9Y5X1 595 aa13.58□□□□□ -0.24
DDX39A-202ENST00000324340 MICAL3Q7RTP6 2002 aa13.57□□□□□ -0.24
DDX39A-202ENST00000324340 TET1Q8NFU7 2136 aa13.57□□□□□ -0.24
DDX39A-202ENST00000324340 PODXLO00592 558 aa13.57□□□□□ -0.24
DDX39A-202ENST00000324340 TACC1O75410 805 aa13.57□□□□□ -0.24
DDX39A-202ENST00000324340 POMCP01189 267 aa13.57□□□□□ -0.24
DDX39A-202ENST00000324340 MMEP08473 750 aa13.57□□□□□ -0.24
DDX39A-202ENST00000324340 EN2P19622 333 aaPredicted RBP13.57□□□□□ -0.24
DDX39A-202ENST00000324340 ITGB8P26012 769 aa13.57□□□□□ -0.24
DDX39A-202ENST00000324340 GNA15P30679 374 aa13.57□□□□□ -0.24
DDX39A-202ENST00000324340 RAP1GAPP47736 663 aa13.57□□□□□ -0.24
DDX39A-202ENST00000324340 CLCNKBP51801 687 aa13.57□□□□□ -0.24
DDX39A-202ENST00000324340 RAD23BP54727 409 aa13.57□□□□□ -0.24
DDX39A-202ENST00000324340 DSC1Q08554 894 aa13.57□□□□□ -0.24
DDX39A-202ENST00000324340 SOWAHAQ2M3V2 549 aa13.57□□□□□ -0.24
DDX39A-202ENST00000324340 NOMO2Q5JPE7 1267 aa13.57□□□□□ -0.24
DDX39A-202ENST00000324340 CCDC122Q5T0U0 273 aa13.57□□□□□ -0.24
DDX39A-202ENST00000324340 KIAA1328Q86T90 577 aa13.57□□□□□ -0.24
DDX39A-202ENST00000324340 PALB2Q86YC2 1186 aa13.57□□□□□ -0.24
DDX39A-202ENST00000324340 TOP6BLQ8N6T0 577 aa13.57□□□□□ -0.24
DDX39A-202ENST00000324340 PCDHB18PQ96TA0 734 aa13.57□□□□□ -0.24
DDX39A-202ENST00000324340 TSGA10Q9BZW7 698 aa13.57□□□□□ -0.24
DDX39A-202ENST00000324340 LACRTQ9GZZ8 138 aa13.57□□□□□ -0.24
DDX39A-202ENST00000324340 ISCUQ9H1K1 167 aa13.57□□□□□ -0.24
DDX39A-202ENST00000324340 VPS18Q9P253 973 aa13.57□□□□□ -0.24
DDX39A-202ENST00000324340 MYO1AQ9UBC5 1043 aa13.57□□□□□ -0.24
DDX39A-202ENST00000324340 CDC23Q9UJX2 597 aa13.57□□□□□ -0.24
DDX39A-202ENST00000324340 BARX2Q9UMQ3 279 aaPredicted RBP13.57□□□□□ -0.24
DDX39A-202ENST00000324340 PCDHB7Q9Y5E2 793 aa13.57□□□□□ -0.24
DDX39A-202ENST00000324340 TTC3P53804 2025 aa13.56□□□□□ -0.24
DDX39A-202ENST00000324340 BTNL10A8MVZ5 291 aa13.56□□□□□ -0.24
DDX39A-202ENST00000324340 HOXA2O43364 376 aa13.56□□□□□ -0.24
DDX39A-202ENST00000324340 KRT86O43790 486 aa13.56□□□□□ -0.24
DDX39A-202ENST00000324340 ABL1P00519 1130 aa13.56□□□□□ -0.24
DDX39A-202ENST00000324340 FGFR1P11362 822 aa13.56□□□□□ -0.24
DDX39A-202ENST00000324340 GNG11P61952 73 aa13.56□□□□□ -0.24
DDX39A-202ENST00000324340 KIF5AQ12840 1032 aa13.56□□□□□ -0.24
DDX39A-202ENST00000324340 WHAMMP3Q1A5X7 153 aa13.56□□□□□ -0.24
DDX39A-202ENST00000324340 MFSD5Q6N075 450 aa13.56□□□□□ -0.24
DDX39A-202ENST00000324340 WDR93Q6P2C0 686 aa13.56□□□□□ -0.24
DDX39A-202ENST00000324340 LRRC31Q6UY01 552 aa13.56□□□□□ -0.24
DDX39A-202ENST00000324340 TRIM72Q6ZMU5 477 aa13.56□□□□□ -0.24
DDX39A-202ENST00000324340 DEFB128Q7Z7B8 93 aa13.56□□□□□ -0.24
DDX39A-202ENST00000324340 UNC93AQ86WB7 457 aa13.56□□□□□ -0.24
DDX39A-202ENST00000324340 SLC4A11Q8NBS3 891 aa13.56□□□□□ -0.24
DDX39A-202ENST00000324340 URGCPQ8TCY9 931 aa13.56□□□□□ -0.24
DDX39A-202ENST00000324340 ZNF606Q8WXB4 792 aa13.56□□□□□ -0.24
DDX39A-202ENST00000324340 TMEM176AQ96HP8 235 aa13.56□□□□□ -0.24
DDX39A-202ENST00000324340 TWNKQ96RR1 684 aa13.56□□□□□ -0.24
DDX39A-202ENST00000324340 MMS19Q96T76 1030 aa13.56□□□□□ -0.24
DDX39A-202ENST00000324340 ELOVL4Q9GZR5 314 aa13.56□□□□□ -0.24
DDX39A-202ENST00000324340 CXorf56Q9H5V9 222 aa13.56□□□□□ -0.24
DDX39A-202ENST00000324340 LZTFL1Q9NQ48 299 aa13.56□□□□□ -0.24
DDX39A-202ENST00000324340 INPP5FQ9Y2H2 1132 aa13.56□□□□□ -0.24
DDX39A-202ENST00000324340 ALPK3Q96L96 1907 aa13.55□□□□□ -0.24
DDX39A-202ENST00000324340 ABHD14A-ACY1A0A1B0GW23 586 aa13.55□□□□□ -0.24
DDX39A-202ENST00000324340 CALCAP01258 141 aa13.55□□□□□ -0.24
DDX39A-202ENST00000324340 CYP1A1P04798 512 aaPredicted RBP13.55□□□□□ -0.24
DDX39A-202ENST00000324340 PFKMP08237 780 aa13.55□□□□□ -0.24
DDX39A-202ENST00000324340 UNGP13051 313 aaPredicted RBP13.55□□□□□ -0.24
DDX39A-202ENST00000324340 GYS2P54840 703 aa13.55□□□□□ -0.24
DDX39A-202ENST00000324340 IKBKEQ14164 716 aa13.55□□□□□ -0.24
DDX39A-202ENST00000324340 CD300LGQ6UXG3 332 aa13.55□□□□□ -0.24
DDX39A-202ENST00000324340 NPAS4Q8IUM7 802 aa13.55□□□□□ -0.24
DDX39A-202ENST00000324340 C3orf58Q8NDZ4 430 aa13.55□□□□□ -0.24
DDX39A-202ENST00000324340 KBTBD7Q8WVZ9 684 aa13.55□□□□□ -0.24
DDX39A-202ENST00000324340 ABHD8Q96I13 439 aa13.55□□□□□ -0.24
DDX39A-202ENST00000324340 CASD1Q96PB1 797 aa13.55□□□□□ -0.24
DDX39A-202ENST00000324340 ZSWIM1Q9BR11 485 aa13.55□□□□□ -0.24
DDX39A-202ENST00000324340 MRPL45Q9BRJ2 306 aaKnown RBP13.55□□□□□ -0.24
DDX39A-202ENST00000324340 TBC1D13Q9NVG8 400 aa13.55□□□□□ -0.24
DDX39A-202ENST00000324340 HMGXB4Q9UGU5 601 aa13.55□□□□□ -0.24
DDX39A-202ENST00000324340 KIAA1257Q9ULG3 409 aa13.55□□□□□ -0.24
DDX39A-202ENST00000324340 PCDHGC3Q9UN70 934 aa13.55□□□□□ -0.24
DDX39A-202ENST00000324340 TFR2Q9UP52 801 aa13.55□□□□□ -0.24
DDX39A-202ENST00000324340 CASTOR2A6NHX0 329 aa13.54□□□□□ -0.24
DDX39A-202ENST00000324340 TMEM189-UBE2V1I3L0A0 370 aa13.54□□□□□ -0.24
DDX39A-202ENST00000324340 THAP12O43422 761 aa13.54□□□□□ -0.24
DDX39A-202ENST00000324340 SHOX2O60902 331 aaPredicted RBP13.54□□□□□ -0.24
DDX39A-202ENST00000324340 RTN2O75298 545 aa13.54□□□□□ -0.24
DDX39A-202ENST00000324340 DDHD2O94830 711 aa13.54□□□□□ -0.24
DDX39A-202ENST00000324340 H2AFZP0C0S5 128 aa13.54□□□□□ -0.24
DDX39A-202ENST00000324340 RAG1P15918 1043 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms