RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 E2F1Q01094 437 aa7.32□□□□□ -1.24
CSTF3-201ENST00000323959 TNK2Q07912 1038 aa7.32□□□□□ -1.24
CSTF3-201ENST00000323959 SF3A1Q15459 793 aaKnown RBP7.32□□□□□ -1.24
CSTF3-201ENST00000323959 ARHGAP15Q53QZ3 475 aa7.32□□□□□ -1.24
CSTF3-201ENST00000323959 ZNF410Q86VK4 478 aa7.32□□□□□ -1.24
CSTF3-201ENST00000323959 FCHSD1Q86WN1 690 aa7.32□□□□□ -1.24
CSTF3-201ENST00000323959 RGL4Q8IZJ4 473 aa7.32□□□□□ -1.24
CSTF3-201ENST00000323959 METTL13Q8N6R0 699 aa7.32□□□□□ -1.24
CSTF3-201ENST00000323959 ENAHQ8N8S7 591 aaPredicted RBP7.32□□□□□ -1.24
CSTF3-201ENST00000323959 GALNT11Q8NCW6 608 aa7.32□□□□□ -1.24
CSTF3-201ENST00000323959 EZH1Q92800 747 aaPredicted RBP7.32□□□□□ -1.24
CSTF3-201ENST00000323959 MTMR8Q96EF0 704 aa7.32□□□□□ -1.24
CSTF3-201ENST00000323959 CCDC51Q96ER9 411 aa7.32□□□□□ -1.24
CSTF3-201ENST00000323959 ASCL3Q9NQ33 180 aa7.32□□□□□ -1.24
CSTF3-201ENST00000323959 KIF3AQ9Y496 699 aa7.32□□□□□ -1.24
CSTF3-201ENST00000323959 IGHV1OR15-9A0A0B4J2B8 117 aa7.32□□□□□ -1.24
CSTF3-201ENST00000323959 A1L4Q6 167 aa7.32□□□□□ -1.24
CSTF3-201ENST00000323959 SH2B2O14492 632 aaPredicted RBP7.32□□□□□ -1.24
CSTF3-201ENST00000323959 ABLIM3O94929 683 aa7.32□□□□□ -1.24
CSTF3-201ENST00000323959 FAM87AP0C7U9 286 aa7.32□□□□□ -1.24
CSTF3-201ENST00000323959 ITGA4P13612 1032 aa7.32□□□□□ -1.24
CSTF3-201ENST00000323959 ANTXR2P58335 489 aa7.32□□□□□ -1.24
CSTF3-201ENST00000323959 GRIK3Q13003 919 aa7.32□□□□□ -1.24
CSTF3-201ENST00000323959 TBR1Q16650 682 aa7.32□□□□□ -1.24
CSTF3-201ENST00000323959 TPGS2Q68CL5 300 aa7.32□□□□□ -1.24
CSTF3-201ENST00000323959 KRI1Q8N9T8 703 aaKnown RBP7.32□□□□□ -1.24
CSTF3-201ENST00000323959 FAM167AQ96KS9 214 aa7.32□□□□□ -1.24
CSTF3-201ENST00000323959 JMJD4Q9H9V9 463 aa7.32□□□□□ -1.24
CSTF3-201ENST00000323959 POLR1BQ9H9Y6 1135 aa7.32□□□□□ -1.24
CSTF3-201ENST00000323959 UBIAD1Q9Y5Z9 338 aa7.32□□□□□ -1.24
CSTF3-201ENST00000323959 TCHHQ07283 1943 aa7.32□□□□□ -1.24
CSTF3-201ENST00000323959 LAMA1P25391 3075 aa7.32□□□□□ -1.24
CSTF3-201ENST00000323959 DHX16O60231 1041 aaKnown RBP7.31□□□□□ -1.24
CSTF3-201ENST00000323959 BAG4O95429 457 aaKnown RBP7.31□□□□□ -1.24
CSTF3-201ENST00000323959 FGFR3P22607 806 aa7.31□□□□□ -1.24
CSTF3-201ENST00000323959 FAM171A1Q5VUB5 890 aa7.31□□□□□ -1.24
CSTF3-201ENST00000323959 Q6ZUG5 572 aa7.31□□□□□ -1.24
CSTF3-201ENST00000323959 LRRC3BQ96PB8 259 aa7.31□□□□□ -1.24
CSTF3-201ENST00000323959 SDF4Q9BRK5 362 aa7.31□□□□□ -1.24
CSTF3-201ENST00000323959 UBA5Q9GZZ9 404 aa7.31□□□□□ -1.24
CSTF3-201ENST00000323959 LY9Q9HBG7 655 aa7.31□□□□□ -1.24
CSTF3-201ENST00000323959 AGPAT5Q9NUQ2 364 aa7.31□□□□□ -1.24
CSTF3-201ENST00000323959 ADAMTS1Q9UHI8 967 aa7.31□□□□□ -1.24
CSTF3-201ENST00000323959 GIT1Q9Y2X7 761 aa7.31□□□□□ -1.24
CSTF3-201ENST00000323959 TAF6LQ9Y6J9 622 aa7.31□□□□□ -1.24
CSTF3-201ENST00000323959 ATMQ13315 3056 aa7.31□□□□□ -1.24
CSTF3-201ENST00000323959 ZSCAN22P10073 491 aaPredicted RBP7.31□□□□□ -1.24
CSTF3-201ENST00000323959 CLCN3P51790 818 aa7.31□□□□□ -1.24
CSTF3-201ENST00000323959 GABREP78334 506 aa7.31□□□□□ -1.24
CSTF3-201ENST00000323959 BNC1Q01954 994 aa7.31□□□□□ -1.24
CSTF3-201ENST00000323959 PSMD2Q13200 908 aa7.31□□□□□ -1.24
CSTF3-201ENST00000323959 ZXDCQ2QGD7 858 aaPredicted RBP7.31□□□□□ -1.24
CSTF3-201ENST00000323959 HACE1Q8IYU2 909 aa7.31□□□□□ -1.24
CSTF3-201ENST00000323959 HS6ST3Q8IZP7 471 aa7.31□□□□□ -1.24
CSTF3-201ENST00000323959 ZNF461Q8TAF7 563 aa7.31□□□□□ -1.24
CSTF3-201ENST00000323959 IGDCC4Q8TDY8 1250 aa7.31□□□□□ -1.24
CSTF3-201ENST00000323959 NLRP7Q8WX94 980 aa7.31□□□□□ -1.24
CSTF3-201ENST00000323959 EXTL1Q92935 676 aa7.31□□□□□ -1.24
CSTF3-201ENST00000323959 CNDP2Q96KP4 475 aaKnown RBP7.31□□□□□ -1.24
CSTF3-201ENST00000323959 GKN1Q9NS71 199 aa7.31□□□□□ -1.24
CSTF3-201ENST00000323959 PARP2Q9UGN5 583 aa7.31□□□□□ -1.24
CSTF3-201ENST00000323959 PLAAQ9Y263 795 aa7.31□□□□□ -1.24
CSTF3-201ENST00000323959 LZTS3O60299 673 aaPredicted RBP7.31□□□□□ -1.24
CSTF3-201ENST00000323959 CLDN1O95832 211 aa7.31□□□□□ -1.24
CSTF3-201ENST00000323959 CHGBP05060 677 aa7.31□□□□□ -1.24
CSTF3-201ENST00000323959 HSP90AA1P07900 732 aaKnown RBP7.31□□□□□ -1.24
CSTF3-201ENST00000323959 PDIA3P30101 505 aaKnown RBP7.31□□□□□ -1.24
CSTF3-201ENST00000323959 USP11P51784 963 aa7.31□□□□□ -1.24
CSTF3-201ENST00000323959 ANKS3Q6ZW76 656 aa7.31□□□□□ -1.24
CSTF3-201ENST00000323959 TBC1D10CQ8IV04 446 aa7.31□□□□□ -1.24
CSTF3-201ENST00000323959 IGSF8Q969P0 613 aa7.31□□□□□ -1.24
CSTF3-201ENST00000323959 GRAMD1AQ96CP6 724 aa7.31□□□□□ -1.24
CSTF3-201ENST00000323959 HEXIM2Q96MH2 286 aaKnown RBP7.31□□□□□ -1.24
CSTF3-201ENST00000323959 ZSCAN16Q9H4T2 348 aaPredicted RBP7.31□□□□□ -1.24
CSTF3-201ENST00000323959 SMC3Q9UQE7 1217 aa7.31□□□□□ -1.24
CSTF3-201ENST00000323959 UBE4BO95155 1302 aa7.3□□□□□ -1.24
CSTF3-201ENST00000323959 UTP20O75691 2785 aaKnown RBP7.3□□□□□ -1.24
CSTF3-201ENST00000323959 WDR64B1ANS9 1081 aa7.3□□□□□ -1.24
CSTF3-201ENST00000323959 GOLGA6L22H0YM25 854 aa7.3□□□□□ -1.24
CSTF3-201ENST00000323959 LAD1O00515 517 aa7.3□□□□□ -1.24
CSTF3-201ENST00000323959 STX6O43752 255 aa7.3□□□□□ -1.24
CSTF3-201ENST00000323959 RANBP6O60518 1105 aaKnown RBP7.3□□□□□ -1.24
CSTF3-201ENST00000323959 NDUFS2O75306 463 aa7.3□□□□□ -1.24
CSTF3-201ENST00000323959 LARGE1O95461 756 aa7.3□□□□□ -1.24
CSTF3-201ENST00000323959 FGFR4P22455 802 aa7.3□□□□□ -1.24
CSTF3-201ENST00000323959 GJA4P35212 333 aa7.3□□□□□ -1.24
CSTF3-201ENST00000323959 KLHL40Q2TBA0 621 aa7.3□□□□□ -1.24
CSTF3-201ENST00000323959 SLFNL1Q499Z3 407 aa7.3□□□□□ -1.24
CSTF3-201ENST00000323959 EFCAB12Q6NXP0 572 aa7.3□□□□□ -1.24
CSTF3-201ENST00000323959 PADI6Q6TGC4 694 aa7.3□□□□□ -1.24
CSTF3-201ENST00000323959 TMEM92Q6UXU6 159 aa7.3□□□□□ -1.24
CSTF3-201ENST00000323959 NAPBQ9H115 298 aa7.3□□□□□ -1.24
CSTF3-201ENST00000323959 SLKQ9H2G2 1235 aaPredicted RBP7.3□□□□□ -1.24
CSTF3-201ENST00000323959 FBRSL1Q9HCM7 1045 aaKnown RBP7.3□□□□□ -1.24
CSTF3-201ENST00000323959 OSGEPQ9NPF4 335 aa7.3□□□□□ -1.24
CSTF3-201ENST00000323959 ENTPD4Q9Y227 616 aa7.3□□□□□ -1.24
CSTF3-201ENST00000323959 MED13Q9UHV7 2174 aa7.3□□□□□ -1.24
CSTF3-201ENST00000323959 HEATR9A2RTY3 570 aa7.3□□□□□ -1.24
CSTF3-201ENST00000323959 ARL5CA6NH57 179 aa7.3□□□□□ -1.24
CSTF3-201ENST00000323959 YKT6O15498 198 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms