RNA–Protein interactions for RNA: ENST00000320280.8

SCAMP1-201, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 3

Gene SCAMP1, Length 3,766 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-201ENST00000320280 TAF6P49848 677 aa3.53□□□□□ -1.84
SCAMP1-201ENST00000320280 MXI1P50539 228 aa3.53□□□□□ -1.84
SCAMP1-201ENST00000320280 CASP5P51878 434 aa3.53□□□□□ -1.84
SCAMP1-201ENST00000320280 MYL7Q01449 175 aa3.53□□□□□ -1.84
SCAMP1-201ENST00000320280 MLLT1Q03111 559 aaPredicted RBP3.53□□□□□ -1.84
SCAMP1-201ENST00000320280 DRP2Q13474 957 aa3.53□□□□□ -1.84
SCAMP1-201ENST00000320280 NAB2Q15742 525 aa3.53□□□□□ -1.84
SCAMP1-201ENST00000320280 ENOX2Q16206 610 aaKnown RBP3.53□□□□□ -1.84
SCAMP1-201ENST00000320280 WDR44Q5JSH3 913 aa3.53□□□□□ -1.84
SCAMP1-201ENST00000320280 C10orf76Q5T2E6 689 aa3.53□□□□□ -1.84
SCAMP1-201ENST00000320280 HERC6Q8IVU3 1022 aa3.53□□□□□ -1.84
SCAMP1-201ENST00000320280 C7orf61Q8IZ16 206 aa3.53□□□□□ -1.84
SCAMP1-201ENST00000320280 TMEM40Q8WWA1 233 aa3.53□□□□□ -1.84
SCAMP1-201ENST00000320280 LINC01599Q8WXQ3 324 aa3.53□□□□□ -1.84
SCAMP1-201ENST00000320280 ANP32BQ92688 251 aaKnown RBP3.53□□□□□ -1.84
SCAMP1-201ENST00000320280 WNT8BQ93098 351 aa3.53□□□□□ -1.84
SCAMP1-201ENST00000320280 SLC35C1Q96A29 364 aa3.53□□□□□ -1.84
SCAMP1-201ENST00000320280 FUBP3Q96I24 572 aaKnown RBP eCLIP3.53□□□□□ -1.845e-9■■■□□ 16.9
SCAMP1-201ENST00000320280 ZNF558Q96NG5 402 aa3.53□□□□□ -1.84
SCAMP1-201ENST00000320280 CASD1Q96PB1 797 aa3.53□□□□□ -1.84
SCAMP1-201ENST00000320280 NCAPGQ9BPX3 1015 aa3.53□□□□□ -1.84
SCAMP1-201ENST00000320280 C11orf84Q9BUA3 381 aaPredicted RBP3.53□□□□□ -1.84
SCAMP1-201ENST00000320280 ZHX3Q9H4I2 956 aa3.53□□□□□ -1.84
SCAMP1-201ENST00000320280 MINDY3Q9H8M7 445 aa3.53□□□□□ -1.84
SCAMP1-201ENST00000320280 AVENQ9NQS1 362 aaPredicted RBP3.53□□□□□ -1.84
SCAMP1-201ENST00000320280 MSRAQ9UJ68 235 aa3.53□□□□□ -1.84
SCAMP1-201ENST00000320280 HCN2Q9UL51 889 aa3.53□□□□□ -1.84
SCAMP1-201ENST00000320280 NFE2L3Q9Y4A8 694 aa3.53□□□□□ -1.84
SCAMP1-201ENST00000320280 PCDHB12Q9Y5F1 795 aa3.53□□□□□ -1.84
SCAMP1-201ENST00000320280 SF3B1O75533 1304 aaKnown RBP eCLIP3.53□□□□□ -1.84
SCAMP1-201ENST00000320280 DENND4CQ5VZ89 1909 aa3.53□□□□□ -1.84
SCAMP1-201ENST00000320280 ANKRD63C9JTQ0 380 aa3.53□□□□□ -1.84
SCAMP1-201ENST00000320280 M0R082 166 aa3.53□□□□□ -1.84
SCAMP1-201ENST00000320280 FSCN2O14926 492 aa3.53□□□□□ -1.84
SCAMP1-201ENST00000320280 ZNF189O75820 626 aaPredicted RBP3.53□□□□□ -1.84
SCAMP1-201ENST00000320280 MICAL2O94851 1124 aa3.53□□□□□ -1.84
SCAMP1-201ENST00000320280 PBX1P40424 430 aa3.53□□□□□ -1.84
SCAMP1-201ENST00000320280 MAGEA11P43364 429 aa3.53□□□□□ -1.84
SCAMP1-201ENST00000320280 COPB1P53618 953 aaKnown RBP3.53□□□□□ -1.84
SCAMP1-201ENST00000320280 MFAP3P55082 362 aa3.53□□□□□ -1.84
SCAMP1-201ENST00000320280 ZNF200P98182 395 aaPredicted RBP3.53□□□□□ -1.84
SCAMP1-201ENST00000320280 TIGD5Q53EQ6 642 aa3.53□□□□□ -1.84
SCAMP1-201ENST00000320280 COL13A1Q5TAT6 717 aaPredicted RBP3.53□□□□□ -1.84
SCAMP1-201ENST00000320280 TPGS2Q68CL5 300 aa3.53□□□□□ -1.84
SCAMP1-201ENST00000320280 CHSY3Q70JA7 882 aa3.53□□□□□ -1.84
SCAMP1-201ENST00000320280 BEND5Q7L4P6 421 aa3.53□□□□□ -1.84
SCAMP1-201ENST00000320280 METTL23Q86XA0 190 aa3.53□□□□□ -1.84
SCAMP1-201ENST00000320280 COLGALT2Q8IYK4 626 aa3.53□□□□□ -1.84
SCAMP1-201ENST00000320280 TDHQ8IZJ6 230 aa3.53□□□□□ -1.84
SCAMP1-201ENST00000320280 CCDC112Q8NEF3 446 aa3.53□□□□□ -1.84
SCAMP1-201ENST00000320280 DBF4BQ8NFT6 615 aa3.53□□□□□ -1.84
SCAMP1-201ENST00000320280 CMASQ8NFW8 434 aaPredicted RBP3.53□□□□□ -1.84
SCAMP1-201ENST00000320280 ZNF417Q8TAU3 575 aa3.53□□□□□ -1.84
SCAMP1-201ENST00000320280 OVCA2Q8WZ82 227 aa3.53□□□□□ -1.84
SCAMP1-201ENST00000320280 NT5C1BQ96P26 610 aa3.53□□□□□ -1.84
SCAMP1-201ENST00000320280 FAM193BQ96PV7 902 aaPredicted RBP3.53□□□□□ -1.84
SCAMP1-201ENST00000320280 ZNF587Q96SQ5 575 aaPredicted RBP3.53□□□□□ -1.84
SCAMP1-201ENST00000320280 PLIN2Q99541 437 aa3.53□□□□□ -1.84
SCAMP1-201ENST00000320280 TUBGCP2Q9BSJ2 902 aa3.53□□□□□ -1.84
SCAMP1-201ENST00000320280 ZNF518BQ9C0D4 1074 aa3.53□□□□□ -1.84
SCAMP1-201ENST00000320280 AGO3Q9H9G7 860 aaKnown RBP3.53□□□□□ -1.84
SCAMP1-201ENST00000320280 RXFP1Q9HBX9 757 aa3.53□□□□□ -1.84
SCAMP1-201ENST00000320280 CBX8Q9HC52 389 aa3.53□□□□□ -1.84
SCAMP1-201ENST00000320280 NGRNQ9NPE2 291 aaKnown RBP3.53□□□□□ -1.84
SCAMP1-201ENST00000320280 DZANK1Q9NVP4 752 aa3.53□□□□□ -1.84
SCAMP1-201ENST00000320280 VWA8A3KMH1 1905 aa3.53□□□□□ -1.84
SCAMP1-201ENST00000320280 GREB1Q4ZG55 1949 aa3.53□□□□□ -1.84
SCAMP1-201ENST00000320280 LOC101059915A0A1B0GWI6 518 aaPredicted RBP3.53□□□□□ -1.84
SCAMP1-201ENST00000320280 SYCE3A1L190 88 aa3.53□□□□□ -1.84
SCAMP1-201ENST00000320280 ARL5CA6NH57 179 aa3.53□□□□□ -1.84
SCAMP1-201ENST00000320280 LRRIQ3A6PVS8 624 aaPredicted RBP3.53□□□□□ -1.84
SCAMP1-201ENST00000320280 MED7O43513 233 aa3.53□□□□□ -1.84
SCAMP1-201ENST00000320280 LSM8O95777 96 aaKnown RBP3.53□□□□□ -1.84
SCAMP1-201ENST00000320280 ASS1P00966 412 aaKnown RBP3.53□□□□□ -1.84
SCAMP1-201ENST00000320280 ADH6P28332 368 aa3.53□□□□□ -1.84
SCAMP1-201ENST00000320280 PCSK1P29120 753 aa3.53□□□□□ -1.84
SCAMP1-201ENST00000320280 MATR3P43243 847 aaKnown RBP eCLIP3.53□□□□□ -1.84
SCAMP1-201ENST00000320280 MTIF2P46199 727 aaKnown RBP3.53□□□□□ -1.84
SCAMP1-201ENST00000320280 PPP3CCP48454 512 aa3.53□□□□□ -1.84
SCAMP1-201ENST00000320280 PDE6CP51160 858 aa3.53□□□□□ -1.84
SCAMP1-201ENST00000320280 PTPROQ16827 1216 aa3.53□□□□□ -1.84
SCAMP1-201ENST00000320280 SLC10A6Q3KNW5 377 aa3.53□□□□□ -1.84
SCAMP1-201ENST00000320280 FOXD4L6Q3SYB3 417 aaPredicted RBP3.53□□□□□ -1.84
SCAMP1-201ENST00000320280 FOXD4L3Q6VB84 417 aaPredicted RBP3.53□□□□□ -1.84
SCAMP1-201ENST00000320280 AGMOQ6ZNB7 445 aa3.53□□□□□ -1.84
SCAMP1-201ENST00000320280 ANKS3Q6ZW76 656 aa3.53□□□□□ -1.84
SCAMP1-201ENST00000320280 ARCQ7LC44 396 aa3.53□□□□□ -1.84
SCAMP1-201ENST00000320280 CNGA4Q8IV77 575 aa3.53□□□□□ -1.84
SCAMP1-201ENST00000320280 GRAMD1CQ8IYS0 662 aa3.53□□□□□ -1.84
SCAMP1-201ENST00000320280 FIBCD1Q8N539 461 aa3.53□□□□□ -1.84
SCAMP1-201ENST00000320280 UBR7Q8N806 425 aa3.53□□□□□ -1.84
SCAMP1-201ENST00000320280 COLGALT1Q8NBJ5 622 aa3.53□□□□□ -1.84
SCAMP1-201ENST00000320280 MSANTD4Q8NCY6 345 aa3.53□□□□□ -1.84
SCAMP1-201ENST00000320280 ZNF397Q8NF99 534 aaPredicted RBP3.53□□□□□ -1.84
SCAMP1-201ENST00000320280 PIK3R5Q8WYR1 880 aa3.53□□□□□ -1.84
SCAMP1-201ENST00000320280 VWCEQ96DN2 955 aa3.53□□□□□ -1.84
SCAMP1-201ENST00000320280 BTBD6Q96KE9 485 aa3.53□□□□□ -1.84
SCAMP1-201ENST00000320280 TCHPQ9BT92 498 aa3.53□□□□□ -1.84
SCAMP1-201ENST00000320280 SRRTQ9BXP5 876 aaKnown RBP3.53□□□□□ -1.84
SCAMP1-201ENST00000320280 NIF3L1Q9GZT8 377 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms