RNA–Protein interactions for RNA: ENST00000319792.7

NECTIN3-201, Transcript of nectin cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NECTIN3, Length 1,549 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-201ENST00000319792 SENP8Q96LD8 212 aa33.28■■■□□ 2.92
NECTIN3-201ENST00000319792 HEXIM2Q96MH2 286 aaKnown RBP33.28■■■□□ 2.92
NECTIN3-201ENST00000319792 PAAF1Q9BRP4 392 aa33.28■■■□□ 2.92
NECTIN3-201ENST00000319792 RNF216Q9NWF9 866 aaPredicted RBP33.28■■■□□ 2.92
NECTIN3-201ENST00000319792 WDR3Q9UNX4 943 aaKnown RBP eCLIP33.28■■■□□ 2.92
NECTIN3-201ENST00000319792 O00370 1275 aa33.28■■■□□ 2.92
NECTIN3-201ENST00000319792 SSTR3P32745 418 aaPredicted RBP33.28■■■□□ 2.92
NECTIN3-201ENST00000319792 STILQ15468 1287 aa33.28■■■□□ 2.92
NECTIN3-201ENST00000319792 CNKSR3Q6P9H4 555 aa33.28■■■□□ 2.92
NECTIN3-201ENST00000319792 DEFB128Q7Z7B8 93 aa33.28■■■□□ 2.92
NECTIN3-201ENST00000319792 VWCEQ96DN2 955 aa33.28■■■□□ 2.92
NECTIN3-201ENST00000319792 SNX25Q9H3E2 840 aa33.28■■■□□ 2.92
NECTIN3-201ENST00000319792 AVENQ9NQS1 362 aaPredicted RBP33.28■■■□□ 2.92
NECTIN3-201ENST00000319792 FNDC1Q4ZHG4 1894 aaPredicted RBP33.27■■■□□ 2.92
NECTIN3-201ENST00000319792 GRID2IPA4D2P6 1211 aa33.27■■■□□ 2.92
NECTIN3-201ENST00000319792 MTA2O94776 668 aa33.27■■■□□ 2.92
NECTIN3-201ENST00000319792 GNL1P36915 607 aaPredicted RBP33.27■■■□□ 2.92
NECTIN3-201ENST00000319792 NOP2P46087 812 aaKnown RBP33.27■■■□□ 2.92
NECTIN3-201ENST00000319792 CD300LGQ6UXG3 332 aa33.27■■■□□ 2.92
NECTIN3-201ENST00000319792 UBE2Q1Q7Z7E8 422 aa33.27■■■□□ 2.92
NECTIN3-201ENST00000319792 CRYBG2Q8N1P7 616 aa33.27■■■□□ 2.92
NECTIN3-201ENST00000319792 TMEM86AQ8N2M4 240 aa33.27■■■□□ 2.92
NECTIN3-201ENST00000319792 TPCN2Q8NHX9 752 aa33.27■■■□□ 2.92
NECTIN3-201ENST00000319792 RSPH1Q8WYR4 309 aa33.27■■■□□ 2.92
NECTIN3-201ENST00000319792 ZNF653Q96CK0 615 aa33.27■■■□□ 2.92
NECTIN3-201ENST00000319792 TBC1D13Q9NVG8 400 aa33.27■■■□□ 2.92
NECTIN3-201ENST00000319792 STXBP5LQ9Y2K9 1186 aa33.27■■■□□ 2.92
NECTIN3-201ENST00000319792 CEP83Q9Y592 693 aa33.27■■■□□ 2.92
NECTIN3-201ENST00000319792 HOXA2O43364 376 aa33.26■■■□□ 2.91
NECTIN3-201ENST00000319792 C1QBPQ07021 282 aaKnown RBP33.26■■■□□ 2.91
NECTIN3-201ENST00000319792 DENND1BQ6P3S1 775 aa33.26■■■□□ 2.91
NECTIN3-201ENST00000319792 DNAI2Q9GZS0 605 aa33.26■■■□□ 2.91
NECTIN3-201ENST00000319792 JRKLQ9Y4A0 524 aa33.26■■■□□ 2.91
NECTIN3-201ENST00000319792 A8MXQ7 604 aa33.25■■■□□ 2.91
NECTIN3-201ENST00000319792 GABRDO14764 452 aa33.25■■■□□ 2.91
NECTIN3-201ENST00000319792 PALMO75781 387 aa33.25■■■□□ 2.91
NECTIN3-201ENST00000319792 TIMP1P01033 207 aa33.25■■■□□ 2.91
NECTIN3-201ENST00000319792 PTP4A2Q12974 167 aa33.25■■■□□ 2.91
NECTIN3-201ENST00000319792 DCLRE1AQ6PJP8 1040 aa33.25■■■□□ 2.91
NECTIN3-201ENST00000319792 LCLAT1Q6UWP7 414 aa33.25■■■□□ 2.91
NECTIN3-201ENST00000319792 OSTM1Q86WC4 334 aa33.25■■■□□ 2.91
NECTIN3-201ENST00000319792 NPAS4Q8IUM7 802 aa33.25■■■□□ 2.91
NECTIN3-201ENST00000319792 WDTC1Q8N5D0 677 aa33.25■■■□□ 2.91
NECTIN3-201ENST00000319792 LRRC57Q8N9N7 239 aa33.25■■■□□ 2.91
NECTIN3-201ENST00000319792 L2HGDHQ9H9P8 463 aa33.25■■■□□ 2.91
NECTIN3-201ENST00000319792 LRFN2Q9ULH4 789 aa33.25■■■□□ 2.91
NECTIN3-201ENST00000319792 FAM170AA1A519 330 aa33.24■■■□□ 2.91
NECTIN3-201ENST00000319792 B4GALT3O60512 393 aa33.24■■■□□ 2.91
NECTIN3-201ENST00000319792 MMP8P22894 467 aa33.24■■■□□ 2.91
NECTIN3-201ENST00000319792 ACOT1Q86TX2 421 aa33.24■■■□□ 2.91
NECTIN3-201ENST00000319792 COLGALT2Q8IYK4 626 aa33.24■■■□□ 2.91
NECTIN3-201ENST00000319792 C1orf131Q8NDD1 294 aaKnown RBP33.24■■■□□ 2.91
NECTIN3-201ENST00000319792 SPATA18Q8TC71 538 aa33.24■■■□□ 2.91
NECTIN3-201ENST00000319792 CASD1Q96PB1 797 aa33.24■■■□□ 2.91
NECTIN3-201ENST00000319792 OSGEPQ9NPF4 335 aa33.24■■■□□ 2.91
NECTIN3-201ENST00000319792 UVRAGQ9P2Y5 699 aa33.24■■■□□ 2.91
NECTIN3-201ENST00000319792 COG5Q9UP83 839 aa33.24■■■□□ 2.91
NECTIN3-201ENST00000319792 TRIM43BA6NCK2 446 aa33.23■■■□□ 2.91
NECTIN3-201ENST00000319792 DDHD2O94830 711 aa33.23■■■□□ 2.91
NECTIN3-201ENST00000319792 MICAL2O94851 1124 aa33.23■■■□□ 2.91
NECTIN3-201ENST00000319792 TIGD5Q53EQ6 642 aa33.23■■■□□ 2.91
NECTIN3-201ENST00000319792 WSCD1Q658N2 575 aa33.23■■■□□ 2.91
NECTIN3-201ENST00000319792 ARHGAP17Q68EM7 881 aa33.23■■■□□ 2.91
NECTIN3-201ENST00000319792 DSTYKQ6XUX3 929 aa33.23■■■□□ 2.91
NECTIN3-201ENST00000319792 ZNF280BQ86YH2 543 aa33.23■■■□□ 2.91
NECTIN3-201ENST00000319792 RABGGTAQ92696 567 aa33.23■■■□□ 2.91
NECTIN3-201ENST00000319792 TRIM43Q96BQ3 446 aaPredicted RBP33.23■■■□□ 2.91
NECTIN3-201ENST00000319792 ADAM22Q9P0K1 906 aa33.23■■■□□ 2.91
NECTIN3-201ENST00000319792 CNOT8Q9UFF9 292 aaKnown RBP33.23■■■□□ 2.91
NECTIN3-201ENST00000319792 ALPK3Q96L96 1907 aa33.23■■■□□ 2.91
NECTIN3-201ENST00000319792 TMEM189-UBE2V1I3L0A0 370 aa33.23■■■□□ 2.91
NECTIN3-201ENST00000319792 B3GAT3O94766 335 aa33.23■■■□□ 2.91
NECTIN3-201ENST00000319792 PAPD7Q5XG87 772 aaKnown RBP33.23■■■□□ 2.91
NECTIN3-201ENST00000319792 SLFN11Q7Z7L1 901 aa33.23■■■□□ 2.91
NECTIN3-201ENST00000319792 ABI1Q8IZP0 508 aa33.23■■■□□ 2.91
NECTIN3-201ENST00000319792 CTTNBP2NLQ9P2B4 639 aa33.23■■■□□ 2.91
NECTIN3-201ENST00000319792 M0QZQ0 153 aa33.22■■■□□ 2.91
NECTIN3-201ENST00000319792 ATMINO43313 823 aaPredicted RBP33.22■■■□□ 2.91
NECTIN3-201ENST00000319792 URI1O94763 535 aaPredicted RBP33.22■■■□□ 2.91
NECTIN3-201ENST00000319792 ATP1A1P05023 1023 aaKnown RBP33.22■■■□□ 2.91
NECTIN3-201ENST00000319792 LMO2P25791 158 aa33.22■■■□□ 2.91
NECTIN3-201ENST00000319792 AMPD2Q01433 879 aa33.22■■■□□ 2.91
NECTIN3-201ENST00000319792 IKBKEQ14164 716 aa33.22■■■□□ 2.91
NECTIN3-201ENST00000319792 TNIP3Q96KP6 325 aa33.22■■■□□ 2.91
NECTIN3-201ENST00000319792 C11orf70Q9BRQ4 267 aa33.22■■■□□ 2.91
NECTIN3-201ENST00000319792 DPEP3Q9H4B8 488 aa33.22■■■□□ 2.91
NECTIN3-201ENST00000319792 ITGB8P26012 769 aa33.21■■■□□ 2.91
NECTIN3-201ENST00000319792 LIN9Q5TKA1 542 aa33.21■■■□□ 2.91
NECTIN3-201ENST00000319792 MMS22LQ6ZRQ5 1243 aa33.21■■■□□ 2.91
NECTIN3-201ENST00000319792 C12orf29Q8N999 325 aa33.21■■■□□ 2.91
NECTIN3-201ENST00000319792 TSPAN16Q9UKR8 245 aa33.21■■■□□ 2.91
NECTIN3-201ENST00000319792 M0QYV0 167 aa33.2■■■□□ 2.91
NECTIN3-201ENST00000319792 HCRTO43612 131 aa33.2■■■□□ 2.91
NECTIN3-201ENST00000319792 CYP11A1P05108 521 aa33.2■■■□□ 2.91
NECTIN3-201ENST00000319792 CALB1P05937 261 aa33.2■■■□□ 2.91
NECTIN3-201ENST00000319792 ODC1P11926 461 aa33.2■■■□□ 2.91
NECTIN3-201ENST00000319792 RRM1P23921 792 aa33.2■■■□□ 2.91
NECTIN3-201ENST00000319792 LHX1P48742 406 aa33.2■■■□□ 2.91
NECTIN3-201ENST00000319792 RNASELQ05823 741 aaKnown RBP33.2■■■□□ 2.91
NECTIN3-201ENST00000319792 TUBB2AQ13885 445 aa33.2■■■□□ 2.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms