RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 VITQ6UXI7 678 aa19.1■□□□□ 0.65
TPM1-203ENST00000317516 EPM2AIP1Q7L775 607 aaPredicted RBP19.1■□□□□ 0.65
TPM1-203ENST00000317516 HS2ST1Q7LGA3 356 aa19.1■□□□□ 0.65
TPM1-203ENST00000317516 FRMD5Q7Z6J6 570 aa19.1■□□□□ 0.65
TPM1-203ENST00000317516 LRRTM3Q86VH5 581 aa19.1■□□□□ 0.65
TPM1-203ENST00000317516 MFSD6LQ8IWD5 586 aa19.1■□□□□ 0.65
TPM1-203ENST00000317516 PDCL2Q8N4E4 241 aa19.1■□□□□ 0.65
TPM1-203ENST00000317516 TTC9BQ8N6N2 239 aa19.1■□□□□ 0.65
TPM1-203ENST00000317516 GLIS3Q8NEA6 775 aa19.1■□□□□ 0.65
TPM1-203ENST00000317516 MTMR12Q9C0I1 747 aa19.1■□□□□ 0.65
TPM1-203ENST00000317516 SEMA4AQ9H3S1 761 aa19.1■□□□□ 0.65
TPM1-203ENST00000317516 LTB4R2Q9NPC1 389 aa19.1■□□□□ 0.65
TPM1-203ENST00000317516 HEBP1Q9NRV9 189 aa19.1■□□□□ 0.65
TPM1-203ENST00000317516 INTS13Q9NVM9 706 aa19.1■□□□□ 0.65
TPM1-203ENST00000317516 ABI2Q9NYB9 513 aaPredicted RBP19.1■□□□□ 0.65
TPM1-203ENST00000317516 SNX9Q9Y5X1 595 aa19.1■□□□□ 0.65
TPM1-203ENST00000317516 UBE4BO95155 1302 aa19.09■□□□□ 0.65
TPM1-203ENST00000317516 HEPACAM2A8MVW5 462 aa19.09■□□□□ 0.65
TPM1-203ENST00000317516 DPYSL4O14531 572 aa19.09■□□□□ 0.65
TPM1-203ENST00000317516 HAPLN1P10915 354 aaPredicted RBP19.09■□□□□ 0.65
TPM1-203ENST00000317516 CDC25CP30307 473 aa19.09■□□□□ 0.65
TPM1-203ENST00000317516 LHX1P48742 406 aa19.09■□□□□ 0.65
TPM1-203ENST00000317516 DPH6Q7L8W6 267 aa19.09■□□□□ 0.65
TPM1-203ENST00000317516 CBWD2Q8IUF1 395 aa19.09■□□□□ 0.65
TPM1-203ENST00000317516 TOP6BLQ8N6T0 577 aa19.09■□□□□ 0.65
TPM1-203ENST00000317516 ZNF334Q9HCZ1 680 aaPredicted RBP19.09■□□□□ 0.65
TPM1-203ENST00000317516 DDX43Q9NXZ2 648 aaKnown RBP19.09■□□□□ 0.65
TPM1-203ENST00000317516 CGNQ9P2M7 1197 aaKnown RBP19.09■□□□□ 0.65
TPM1-203ENST00000317516 ZMYM5Q9UJ78 669 aa19.09■□□□□ 0.65
TPM1-203ENST00000317516 ZFHX2Q9C0A1 2572 aaPredicted RBP19.09■□□□□ 0.65
TPM1-203ENST00000317516 NOTCH4Q99466 2003 aa19.08■□□□□ 0.65
TPM1-203ENST00000317516 NRG2O14511 850 aaPredicted RBP19.08■□□□□ 0.64
TPM1-203ENST00000317516 PRPF40AO75400 957 aaKnown RBP19.08■□□□□ 0.64
TPM1-203ENST00000317516 GLULP15104 373 aa19.08■□□□□ 0.64
TPM1-203ENST00000317516 CD72P21854 359 aa19.08■□□□□ 0.64
TPM1-203ENST00000317516 PCSK1P29120 753 aa19.08■□□□□ 0.64
TPM1-203ENST00000317516 AFMP43652 599 aa19.08■□□□□ 0.64
TPM1-203ENST00000317516 PKP1Q13835 747 aa19.08■□□□□ 0.64
TPM1-203ENST00000317516 GPR158Q5T848 1215 aa19.08■□□□□ 0.64
TPM1-203ENST00000317516 ZC3H14Q6PJT7 736 aaKnown RBP19.08■□□□□ 0.64
TPM1-203ENST00000317516 GAREM2Q75VX8 874 aa19.08■□□□□ 0.64
TPM1-203ENST00000317516 WDR49Q8IV35 697 aa19.08■□□□□ 0.64
TPM1-203ENST00000317516 ARID3BQ8IVW6 561 aaPredicted RBP19.08■□□□□ 0.64
TPM1-203ENST00000317516 CXorf38Q8TB03 319 aa19.08■□□□□ 0.64
TPM1-203ENST00000317516 FNBP1Q96RU3 617 aa19.08■□□□□ 0.64
TPM1-203ENST00000317516 LPIN3Q9BQK8 851 aa19.08■□□□□ 0.64
TPM1-203ENST00000317516 BLZF1Q9H2G9 400 aa19.08■□□□□ 0.64
TPM1-203ENST00000317516 TASP1Q9H6P5 420 aa19.08■□□□□ 0.64
TPM1-203ENST00000317516 AGPAT3Q9NRZ7 376 aa19.08■□□□□ 0.64
TPM1-203ENST00000317516 SIX4Q9UIU6 781 aa19.08■□□□□ 0.64
TPM1-203ENST00000317516 L1RE1Q9UN81 338 aa19.08■□□□□ 0.64
TPM1-203ENST00000317516 MTF2Q9Y483 593 aaPredicted RBP19.08■□□□□ 0.64
TPM1-203ENST00000317516 GTF3C3Q9Y5Q9 886 aa19.08■□□□□ 0.64
TPM1-203ENST00000317516 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.07■□□□□ 0.64
TPM1-203ENST00000317516 TGFB1I1O43294 461 aa19.07■□□□□ 0.64
TPM1-203ENST00000317516 LAMTOR5O43504 91 aa19.07■□□□□ 0.64
TPM1-203ENST00000317516 SLFN14P0C7P3 912 aa19.07■□□□□ 0.64
TPM1-203ENST00000317516 HOXD13P35453 343 aa19.07■□□□□ 0.64
TPM1-203ENST00000317516 RPL10AP62906 217 aaKnown RBP19.07■□□□□ 0.64
TPM1-203ENST00000317516 EHHADHQ08426 723 aa19.07■□□□□ 0.64
TPM1-203ENST00000317516 SNRNP35Q16560 246 aaKnown RBP19.07■□□□□ 0.64
TPM1-203ENST00000317516 NELFCDQ8IXH7 590 aa19.07■□□□□ 0.64
TPM1-203ENST00000317516 XXYLT1Q8NBI6 393 aa19.07■□□□□ 0.64
TPM1-203ENST00000317516 RDH13Q8NBN7 331 aa19.07■□□□□ 0.64
TPM1-203ENST00000317516 CSGALNACT1Q8TDX6 532 aa19.07■□□□□ 0.64
TPM1-203ENST00000317516 GIPC2Q8TF65 315 aa19.07■□□□□ 0.64
TPM1-203ENST00000317516 LEO1Q8WVC0 666 aaPredicted RBP19.07■□□□□ 0.64
TPM1-203ENST00000317516 SCFD1Q8WVM8 642 aa19.07■□□□□ 0.64
TPM1-203ENST00000317516 HPDLQ96IR7 371 aa19.07■□□□□ 0.64
TPM1-203ENST00000317516 ABCB6Q9NP58 842 aa19.07■□□□□ 0.64
TPM1-203ENST00000317516 SPATA6Q9NWH7 488 aaPredicted RBP19.07■□□□□ 0.64
TPM1-203ENST00000317516 OBP2AQ9NY56 170 aa19.07■□□□□ 0.64
TPM1-203ENST00000317516 USP25Q9UHP3 1055 aa19.07■□□□□ 0.64
TPM1-203ENST00000317516 PRR23AA6NEV1 266 aa19.06■□□□□ 0.64
TPM1-203ENST00000317516 CHADO15335 359 aa19.06■□□□□ 0.64
TPM1-203ENST00000317516 LRRN2O75325 713 aa19.06■□□□□ 0.64
TPM1-203ENST00000317516 CSH1P0DML2 217 aa19.06■□□□□ 0.64
TPM1-203ENST00000317516 CSH2P0DML3 217 aa19.06■□□□□ 0.64
TPM1-203ENST00000317516 ATF6P18850 670 aa19.06■□□□□ 0.64
TPM1-203ENST00000317516 TNNI1P19237 187 aa19.06■□□□□ 0.64
TPM1-203ENST00000317516 WEE1P30291 646 aa19.06■□□□□ 0.64
TPM1-203ENST00000317516 RPS9P46781 194 aaKnown RBP19.06■□□□□ 0.64
TPM1-203ENST00000317516 CDR1P51861 262 aa19.06■□□□□ 0.64
TPM1-203ENST00000317516 MLLT6P55198 1093 aaPredicted RBP19.06■□□□□ 0.64
TPM1-203ENST00000317516 CUL4BQ13620 913 aa19.06■□□□□ 0.64
TPM1-203ENST00000317516 KNOP1Q1ED39 458 aaKnown RBP19.06■□□□□ 0.64
TPM1-203ENST00000317516 INTS6LQ5JSJ4 861 aaKnown RBP19.06■□□□□ 0.64
TPM1-203ENST00000317516 LMBRD2Q68DH5 695 aaPredicted RBP19.06■□□□□ 0.64
TPM1-203ENST00000317516 C1orf228Q6PIY5 440 aa19.06■□□□□ 0.64
TPM1-203ENST00000317516 ASCL5Q7RTU5 278 aa19.06■□□□□ 0.64
TPM1-203ENST00000317516 ADGRF2Q8IZF7 708 aa19.06■□□□□ 0.64
TPM1-203ENST00000317516 OR5B17Q8NGF7 314 aa19.06■□□□□ 0.64
TPM1-203ENST00000317516 GOLGA5Q8TBA6 731 aa19.06■□□□□ 0.64
TPM1-203ENST00000317516 FAM3CQ92520 227 aa19.06■□□□□ 0.64
TPM1-203ENST00000317516 CLDN23Q96B33 292 aa19.06■□□□□ 0.64
TPM1-203ENST00000317516 MSANTD3Q96H12 275 aa19.06■□□□□ 0.64
TPM1-203ENST00000317516 PI4K2AQ9BTU6 479 aa19.06■□□□□ 0.64
TPM1-203ENST00000317516 SLC39A2Q9NP94 309 aa19.06■□□□□ 0.64
TPM1-203ENST00000317516 ATP6V1DQ9Y5K8 247 aa19.06■□□□□ 0.64
TPM1-203ENST00000317516 GABRDO14764 452 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms