RNA–Protein interactions for RNA: ENST00000317402.11

GEN1-201, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GEN1, Length 9,854 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-201ENST00000317402 SCN7AQ01118 1682 aa3.8□□□□□ -1.8
GEN1-201ENST00000317402 H0Y3Z8 333 aa3.79□□□□□ -1.8
GEN1-201ENST00000317402 H7C1D1 291 aa3.79□□□□□ -1.8
GEN1-201ENST00000317402 ECE2O60344 883 aa3.79□□□□□ -1.8
GEN1-201ENST00000317402 ESRRBO95718 433 aa3.79□□□□□ -1.8
GEN1-201ENST00000317402 LMNAP02545 664 aaKnown RBP3.79□□□□□ -1.8
GEN1-201ENST00000317402 ARHGAP4P98171 946 aa3.79□□□□□ -1.8
GEN1-201ENST00000317402 HGSNATQ68CP4 663 aa3.79□□□□□ -1.8
GEN1-201ENST00000317402 DENND2CQ68D51 928 aa3.79□□□□□ -1.8
GEN1-201ENST00000317402 SNRNP48Q6IEG0 339 aaKnown RBP3.79□□□□□ -1.8
GEN1-201ENST00000317402 DPY19L2P1Q6NXN4 242 aa3.79□□□□□ -1.8
GEN1-201ENST00000317402 C1orf228Q6PIY5 440 aa3.79□□□□□ -1.8
GEN1-201ENST00000317402 CDH24Q86UP0 819 aa3.79□□□□□ -1.8
GEN1-201ENST00000317402 BAP1Q92560 729 aa3.79□□□□□ -1.8
GEN1-201ENST00000317402 SLC5A4Q9NY91 659 aa3.79□□□□□ -1.8
GEN1-201ENST00000317402 SPATA7Q9P0W8 599 aa3.79□□□□□ -1.8
GEN1-201ENST00000317402 GINS2Q9Y248 185 aa3.79□□□□□ -1.8
GEN1-201ENST00000317402 QSER1Q2KHR3 1735 aa3.79□□□□□ -1.8
GEN1-201ENST00000317402 BCL9O00512 1426 aa3.79□□□□□ -1.8
GEN1-201ENST00000317402 ROBO1Q9Y6N7 1651 aa3.79□□□□□ -1.8
GEN1-201ENST00000317402 ARHGAP42A6NI28 874 aa3.79□□□□□ -1.8
GEN1-201ENST00000317402 hCG_1984214I3L0E3 225 aa3.79□□□□□ -1.8
GEN1-201ENST00000317402 NFIBO00712 420 aa3.79□□□□□ -1.8
GEN1-201ENST00000317402 ZBTB24O43167 697 aaPredicted RBP3.79□□□□□ -1.8
GEN1-201ENST00000317402 ADRA2BP18089 450 aa3.79□□□□□ -1.8
GEN1-201ENST00000317402 EIF2AK2P19525 551 aaKnown RBP3.79□□□□□ -1.8
GEN1-201ENST00000317402 NLRP11P59045 1033 aaKnown RBP3.79□□□□□ -1.8
GEN1-201ENST00000317402 HABP4Q5JVS0 413 aaKnown RBP3.79□□□□□ -1.8
GEN1-201ENST00000317402 PATL1Q86TB9 770 aaKnown RBP3.79□□□□□ -1.8
GEN1-201ENST00000317402 BLIDQ8IZY5 108 aa3.79□□□□□ -1.8
GEN1-201ENST00000317402 KLHL29Q96CT2 875 aa3.79□□□□□ -1.8
GEN1-201ENST00000317402 ASCC2Q9H1I8 757 aaPredicted RBP3.79□□□□□ -1.8
GEN1-201ENST00000317402 GGA1Q9UJY5 639 aa3.79□□□□□ -1.8
GEN1-201ENST00000317402 SIK3Q9Y2K2 1263 aa3.79□□□□□ -1.8
GEN1-201ENST00000317402 CAB39Q9Y376 341 aaPredicted RBP3.79□□□□□ -1.8
GEN1-201ENST00000317402 MAD1L1Q9Y6D9 718 aa3.79□□□□□ -1.8
GEN1-201ENST00000317402 SNTNA6NMZ2 147 aa3.79□□□□□ -1.8
GEN1-201ENST00000317402 M0R2N6 131 aa3.79□□□□□ -1.8
GEN1-201ENST00000317402 SUN1O94901 812 aa3.79□□□□□ -1.8
GEN1-201ENST00000317402 TFE3P19532 575 aaPredicted RBP3.79□□□□□ -1.8
GEN1-201ENST00000317402 IRAK1P51617 712 aa3.79□□□□□ -1.8
GEN1-201ENST00000317402 TNNC1P63316 161 aa3.79□□□□□ -1.8
GEN1-201ENST00000317402 THEMIS2Q5TEJ8 643 aa3.79□□□□□ -1.8
GEN1-201ENST00000317402 CCNI2Q6ZMN8 369 aaPredicted RBP3.79□□□□□ -1.8
GEN1-201ENST00000317402 TRAPPC11Q7Z392 1133 aa3.79□□□□□ -1.8
GEN1-201ENST00000317402 ZNF554Q86TJ5 538 aa3.79□□□□□ -1.8
GEN1-201ENST00000317402 CCDC13Q8IYE1 715 aa3.79□□□□□ -1.8
GEN1-201ENST00000317402 WDR60Q8WVS4 1066 aa3.79□□□□□ -1.8
GEN1-201ENST00000317402 CPA5Q8WXQ8 436 aa3.79□□□□□ -1.8
GEN1-201ENST00000317402 CRNKL1Q9BZJ0 848 aaKnown RBP3.79□□□□□ -1.8
GEN1-201ENST00000317402 EPB41L4BQ9H329 900 aa3.79□□□□□ -1.8
GEN1-201ENST00000317402 CHST7Q9NS84 486 aa3.79□□□□□ -1.8
GEN1-201ENST00000317402 PANK4Q9NVE7 773 aa3.79□□□□□ -1.8
GEN1-201ENST00000317402 PDP2Q9P2J9 529 aa3.79□□□□□ -1.8
GEN1-201ENST00000317402 ATXN10Q9UBB4 475 aa3.79□□□□□ -1.8
GEN1-201ENST00000317402 NUP210LQ5VU65 1888 aa3.79□□□□□ -1.8
GEN1-201ENST00000317402 SEMA3EO15041 775 aa3.79□□□□□ -1.8
GEN1-201ENST00000317402 USP1O94782 785 aa3.79□□□□□ -1.8
GEN1-201ENST00000317402 KRT6AP02538 564 aa3.79□□□□□ -1.8
GEN1-201ENST00000317402 KRT6BP04259 564 aa3.79□□□□□ -1.8
GEN1-201ENST00000317402 MSH2P43246 934 aa3.79□□□□□ -1.8
GEN1-201ENST00000317402 KRT6CP48668 564 aa3.79□□□□□ -1.8
GEN1-201ENST00000317402 MPP3Q13368 585 aa3.79□□□□□ -1.8
GEN1-201ENST00000317402 MTMR3Q13615 1198 aa3.79□□□□□ -1.8
GEN1-201ENST00000317402 NBPF12Q5TAG4 269 aaPredicted RBP3.79□□□□□ -1.8
GEN1-201ENST00000317402 C12orf60Q5U649 245 aa3.79□□□□□ -1.8
GEN1-201ENST00000317402 SPATA1Q5VX52 437 aa3.79□□□□□ -1.8
GEN1-201ENST00000317402 TTC30AQ86WT1 665 aa3.79□□□□□ -1.8
GEN1-201ENST00000317402 ANKRD27Q96NW4 1050 aa3.79□□□□□ -1.8
GEN1-201ENST00000317402 PAGR1Q9BTK6 254 aa3.79□□□□□ -1.8
GEN1-201ENST00000317402 PTPRHQ9HD43 1115 aa3.79□□□□□ -1.8
GEN1-201ENST00000317402 USTQ9Y2C2 406 aa3.79□□□□□ -1.8
GEN1-201ENST00000317402 USP9XQ93008 2570 aaPredicted RBP3.79□□□□□ -1.8
GEN1-201ENST00000317402 STRCQ7RTU9 1775 aa3.79□□□□□ -1.8
GEN1-201ENST00000317402 XPOTO43592 962 aaKnown RBP3.79□□□□□ -1.8
GEN1-201ENST00000317402 CD48P09326 243 aa3.79□□□□□ -1.8
GEN1-201ENST00000317402 ALAS1P13196 640 aa3.79□□□□□ -1.8
GEN1-201ENST00000317402 SCG2P13521 617 aa3.79□□□□□ -1.8
GEN1-201ENST00000317402 KRT13P13646 458 aa3.79□□□□□ -1.8
GEN1-201ENST00000317402 PCSK2P16519 638 aa3.79□□□□□ -1.8
GEN1-201ENST00000317402 GTF2A2P52657 109 aa3.79□□□□□ -1.8
GEN1-201ENST00000317402 PLIN5Q00G26 463 aa3.79□□□□□ -1.8
GEN1-201ENST00000317402 C15orf59Q2T9L4 293 aaPredicted RBP3.79□□□□□ -1.8
GEN1-201ENST00000317402 KRT71Q3SY84 523 aa3.79□□□□□ -1.8
GEN1-201ENST00000317402 TPTE2Q6XPS3 522 aa3.79□□□□□ -1.8
GEN1-201ENST00000317402 ARHGAP27Q6ZUM4 889 aa3.79□□□□□ -1.8
GEN1-201ENST00000317402 FBXO33Q7Z6M2 555 aa3.79□□□□□ -1.8
GEN1-201ENST00000317402 METTL13Q8N6R0 699 aa3.79□□□□□ -1.8
GEN1-201ENST00000317402 UCMAQ8WVF2 138 aa3.79□□□□□ -1.8
GEN1-201ENST00000317402 P3H4Q92791 437 aa3.79□□□□□ -1.8
GEN1-201ENST00000317402 PRMT1Q99873 361 aaKnown RBP3.79□□□□□ -1.8
GEN1-201ENST00000317402 CDC23Q9UJX2 597 aa3.79□□□□□ -1.8
GEN1-201ENST00000317402 MEFVO15553 781 aaPredicted RBP3.79□□□□□ -1.8
GEN1-201ENST00000317402 ASAP2O43150 1006 aa3.79□□□□□ -1.8
GEN1-201ENST00000317402 HEXIM1O94992 359 aaKnown RBP3.79□□□□□ -1.8
GEN1-201ENST00000317402 DLATP10515 647 aaKnown RBP3.79□□□□□ -1.8
GEN1-201ENST00000317402 SERPINB6P35237 376 aa3.79□□□□□ -1.8
GEN1-201ENST00000317402 PTK2Q05397 1052 aa3.79□□□□□ -1.8
GEN1-201ENST00000317402 ARHGAP17Q68EM7 881 aa3.79□□□□□ -1.8
GEN1-201ENST00000317402 RUBCNQ92622 972 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms