RNA–Protein interactions for RNA: ENST00000315491.11

TUBB3-201, Transcript of tubulin beta 3 class III, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB3, Length 1,769 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-201ENST00000315491 METTL23Q86XA0 190 aa17.17■□□□□ 0.34
TUBB3-201ENST00000315491 ZNF677Q86XU0 584 aa17.17■□□□□ 0.34
TUBB3-201ENST00000315491 SPATA18Q8TC71 538 aa17.17■□□□□ 0.34
TUBB3-201ENST00000315491 DDX1Q92499 740 aaKnown RBP17.17■□□□□ 0.34
TUBB3-201ENST00000315491 STXBP5LQ9Y2K9 1186 aa17.17■□□□□ 0.34
TUBB3-201ENST00000315491 INSL6Q9Y581 213 aa17.17■□□□□ 0.34
TUBB3-201ENST00000315491 THAP12O43422 761 aa17.17■□□□□ 0.34
TUBB3-201ENST00000315491 CD19P15391 556 aa17.17■□□□□ 0.34
TUBB3-201ENST00000315491 CHRNB2P17787 502 aa17.17■□□□□ 0.34
TUBB3-201ENST00000315491 LAG3P18627 525 aa17.17■□□□□ 0.34
TUBB3-201ENST00000315491 LHX1P48742 406 aa17.17■□□□□ 0.34
TUBB3-201ENST00000315491 BMS1Q14692 1282 aaKnown RBP17.17■□□□□ 0.34
TUBB3-201ENST00000315491 C9orf50Q5SZB4 431 aa17.17■□□□□ 0.34
TUBB3-201ENST00000315491 KCNT2Q6UVM3 1135 aa17.17■□□□□ 0.34
TUBB3-201ENST00000315491 TOGARAM2Q6ZUX3 1019 aa17.17■□□□□ 0.34
TUBB3-201ENST00000315491 TMEM173Q86WV6 379 aaPredicted RBP17.17■□□□□ 0.34
TUBB3-201ENST00000315491 OLIG1Q8TAK6 271 aa17.17■□□□□ 0.34
TUBB3-201ENST00000315491 LNX1Q8TBB1 728 aaPredicted RBP17.17■□□□□ 0.34
TUBB3-201ENST00000315491 ZNF558Q96NG5 402 aa17.17■□□□□ 0.34
TUBB3-201ENST00000315491 DDX43Q9NXZ2 648 aaKnown RBP17.17■□□□□ 0.34
TUBB3-201ENST00000315491 ADAMTS1Q9UHI8 967 aa17.17■□□□□ 0.34
TUBB3-201ENST00000315491 PAXBP1Q9Y5B6 917 aa17.17■□□□□ 0.34
TUBB3-201ENST00000315491 SF3B1O75533 1304 aaKnown RBP eCLIP17.16■□□□□ 0.343e-6■■■■■ 137.9
TUBB3-201ENST00000315491 CARNS1A5YM72 827 aa17.16■□□□□ 0.34
TUBB3-201ENST00000315491 EIF3CLB5ME19 914 aaKnown RBP17.16■□□□□ 0.34
TUBB3-201ENST00000315491 DDX3XO00571 662 aaKnown RBP eCLIP17.16■□□□□ 0.342e-8■■□□□ 13.3
TUBB3-201ENST00000315491 HCRTO43612 131 aa17.16■□□□□ 0.34
TUBB3-201ENST00000315491 MMEP08473 750 aa17.16■□□□□ 0.34
TUBB3-201ENST00000315491 PDGFRBP09619 1106 aa17.16■□□□□ 0.34
TUBB3-201ENST00000315491 BRD2P25440 801 aaKnown RBP17.16■□□□□ 0.34
TUBB3-201ENST00000315491 LMO2P25791 158 aa17.16■□□□□ 0.34
TUBB3-201ENST00000315491 FMO1Q01740 532 aa17.16■□□□□ 0.34
TUBB3-201ENST00000315491 GFPT1Q06210 699 aaPredicted RBP17.16■□□□□ 0.34
TUBB3-201ENST00000315491 SLC18A3Q16572 532 aa17.16■□□□□ 0.34
TUBB3-201ENST00000315491 FUT10Q6P4F1 479 aa17.16■□□□□ 0.34
TUBB3-201ENST00000315491 GLYCTKQ8IVS8 523 aa17.16■□□□□ 0.34
TUBB3-201ENST00000315491 FIBCD1Q8N539 461 aa17.16■□□□□ 0.34
TUBB3-201ENST00000315491 BCL7CQ8WUZ0 217 aaPredicted RBP17.16■□□□□ 0.34
TUBB3-201ENST00000315491 ZNF606Q8WXB4 792 aa17.16■□□□□ 0.34
TUBB3-201ENST00000315491 HEXIM2Q96MH2 286 aaKnown RBP17.16■□□□□ 0.34
TUBB3-201ENST00000315491 EIF3CQ99613 913 aaKnown RBP17.16■□□□□ 0.34
TUBB3-201ENST00000315491 RAD9AQ99638 391 aa17.16■□□□□ 0.34
TUBB3-201ENST00000315491 DNAI2Q9GZS0 605 aa17.16■□□□□ 0.34
TUBB3-201ENST00000315491 SEPT11Q9NVA2 429 aaKnown RBP17.16■□□□□ 0.34
TUBB3-201ENST00000315491 KIAA1257Q9ULG3 409 aa17.16■□□□□ 0.34
TUBB3-201ENST00000315491 A0A087X0T9 212 aa17.15■□□□□ 0.34
TUBB3-201ENST00000315491 CCDC66A2RUB6 948 aa17.15■□□□□ 0.34
TUBB3-201ENST00000315491 SYN3O14994 580 aa17.15■□□□□ 0.34
TUBB3-201ENST00000315491 TLL1O43897 1013 aa17.15■□□□□ 0.34
TUBB3-201ENST00000315491 FAM228BP0C875 321 aa17.15■□□□□ 0.34
TUBB3-201ENST00000315491 VDRP11473 427 aa17.15■□□□□ 0.34
TUBB3-201ENST00000315491 ELAVL2Q12926 359 aaKnown RBP17.15■□□□□ 0.34
TUBB3-201ENST00000315491 ACOT1Q86TX2 421 aa17.15■□□□□ 0.34
TUBB3-201ENST00000315491 COLGALT1Q8NBJ5 622 aa17.15■□□□□ 0.34
TUBB3-201ENST00000315491 SLC30A5Q8TAD4 765 aa17.15■□□□□ 0.34
TUBB3-201ENST00000315491 TFAP2BQ92481 460 aa17.15■□□□□ 0.34
TUBB3-201ENST00000315491 RNPC3Q96LT9 517 aaKnown RBP17.15■□□□□ 0.34
TUBB3-201ENST00000315491 DESI2Q9BSY9 194 aa17.15■□□□□ 0.34
TUBB3-201ENST00000315491 GPR62Q9BZJ7 368 aa17.15■□□□□ 0.34
TUBB3-201ENST00000315491 DPEP3Q9H4B8 488 aa17.15■□□□□ 0.34
TUBB3-201ENST00000315491 MED7O43513 233 aa17.15■□□□□ 0.34
TUBB3-201ENST00000315491 IPO7O95373 1038 aaKnown RBP17.15■□□□□ 0.34
TUBB3-201ENST00000315491 LCA5LO95447 670 aa17.15■□□□□ 0.34
TUBB3-201ENST00000315491 TKTP29401 623 aaKnown RBP17.15■□□□□ 0.34
TUBB3-201ENST00000315491 SHHQ15465 462 aa17.15■□□□□ 0.34
TUBB3-201ENST00000315491 SGO2Q562F6 1265 aa17.15■□□□□ 0.34
TUBB3-201ENST00000315491 FAM171A1Q5VUB5 890 aa17.15■□□□□ 0.34
TUBB3-201ENST00000315491 OVOS1Q6IE37 1185 aa17.15■□□□□ 0.34
TUBB3-201ENST00000315491 CRYBG2Q8N1P7 616 aa17.15■□□□□ 0.34
TUBB3-201ENST00000315491 SLC39A11Q8N1S5 342 aa17.15■□□□□ 0.34
TUBB3-201ENST00000315491 ACRBPQ8NEB7 543 aa17.15■□□□□ 0.34
TUBB3-201ENST00000315491 SP7Q8TDD2 431 aaPredicted RBP17.15■□□□□ 0.34
TUBB3-201ENST00000315491 IGSF21Q96ID5 467 aa17.15■□□□□ 0.34
TUBB3-201ENST00000315491 TNIP3Q96KP6 325 aa17.15■□□□□ 0.34
TUBB3-201ENST00000315491 PCDHB18PQ96TA0 734 aa17.15■□□□□ 0.34
TUBB3-201ENST00000315491 ZSWIM1Q9BR11 485 aa17.15■□□□□ 0.34
TUBB3-201ENST00000315491 ADGRG1Q9Y653 693 aa17.15■□□□□ 0.34
TUBB3-201ENST00000315491 ZNF263O14978 683 aa17.14■□□□□ 0.33
TUBB3-201ENST00000315491 ACAT1P24752 427 aaKnown RBP17.14■□□□□ 0.33
TUBB3-201ENST00000315491 YWHAHQ04917 246 aaPredicted RBP17.14■□□□□ 0.33
TUBB3-201ENST00000315491 PDE4CQ08493 712 aa17.14■□□□□ 0.33
TUBB3-201ENST00000315491 SPA17Q15506 151 aa17.14■□□□□ 0.33
TUBB3-201ENST00000315491 THEM5Q8N1Q8 247 aa17.14■□□□□ 0.33
TUBB3-201ENST00000315491 RTP3Q9BQQ7 232 aa17.14■□□□□ 0.33
TUBB3-201ENST00000315491 AAASQ9NRG9 546 aa17.14■□□□□ 0.33
TUBB3-201ENST00000315491 CFHP08603 1231 aa17.13■□□□□ 0.33
TUBB3-201ENST00000315491 FGFR3P22607 806 aa17.13■□□□□ 0.33
TUBB3-201ENST00000315491 PCSK1P29120 753 aa17.13■□□□□ 0.33
TUBB3-201ENST00000315491 SSTR3P32745 418 aaPredicted RBP17.13■□□□□ 0.33
TUBB3-201ENST00000315491 KRT83P78385 493 aa17.13■□□□□ 0.33
TUBB3-201ENST00000315491 CYP27A1Q02318 531 aa17.13■□□□□ 0.33
TUBB3-201ENST00000315491 PALB2Q86YC2 1186 aa17.13■□□□□ 0.33
TUBB3-201ENST00000315491 C12orf29Q8N999 325 aa17.13■□□□□ 0.33
TUBB3-201ENST00000315491 SYT15Q9BQS2 421 aa17.13■□□□□ 0.33
TUBB3-201ENST00000315491 FAM53CQ9NYF3 392 aa17.13■□□□□ 0.33
TUBB3-201ENST00000315491 SPG21Q9NZD8 308 aa17.13■□□□□ 0.33
TUBB3-201ENST00000315491 NAGPAQ9UK23 515 aa17.13■□□□□ 0.33
TUBB3-201ENST00000315491 CDH9Q9ULB4 789 aa17.13■□□□□ 0.33
TUBB3-201ENST00000315491 NENFQ9UMX5 172 aa17.13■□□□□ 0.33
TUBB3-201ENST00000315491 PCDHGC3Q9UN70 934 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms