RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 CSGALNACT1Q8TDX6 532 aa14.13□□□□□ -0.15
RFFL-201ENST00000315249 RIN2Q8WYP3 895 aaPredicted RBP14.13□□□□□ -0.15
RFFL-201ENST00000315249 RIOX1Q9H6W3 641 aa14.13□□□□□ -0.15
RFFL-201ENST00000315249 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.13□□□□□ -0.15
RFFL-201ENST00000315249 TRPV2Q9Y5S1 764 aa14.13□□□□□ -0.15
RFFL-201ENST00000315249 A0A0G2JND7 137 aa14.13□□□□□ -0.15
RFFL-201ENST00000315249 OPHN1O60890 802 aa14.13□□□□□ -0.15
RFFL-201ENST00000315249 ELNP15502 786 aa14.13□□□□□ -0.15
RFFL-201ENST00000315249 MUTP22033 750 aa14.13□□□□□ -0.15
RFFL-201ENST00000315249 EIF3BP55884 814 aaKnown RBP14.13□□□□□ -0.15
RFFL-201ENST00000315249 COPS5Q92905 334 aa14.13□□□□□ -0.15
RFFL-201ENST00000315249 PTPRN2Q92932 1015 aa14.13□□□□□ -0.15
RFFL-201ENST00000315249 GLTPD2A6NH11 291 aa14.12□□□□□ -0.15
RFFL-201ENST00000315249 PMPCBO75439 489 aa14.12□□□□□ -0.15
RFFL-201ENST00000315249 ATXN3P54252 364 aaPredicted RBP14.12□□□□□ -0.15
RFFL-201ENST00000315249 SFSWAPQ12872 951 aaKnown RBP14.12□□□□□ -0.15
RFFL-201ENST00000315249 GRB10Q13322 594 aa14.12□□□□□ -0.15
RFFL-201ENST00000315249 MTM1Q13496 603 aa14.12□□□□□ -0.15
RFFL-201ENST00000315249 C11orf96Q7Z7L8 435 aa14.12□□□□□ -0.15
RFFL-201ENST00000315249 CACUL1Q86Y37 369 aa14.12□□□□□ -0.15
RFFL-201ENST00000315249 CCDC33Q8N5R6 958 aa14.12□□□□□ -0.15
RFFL-201ENST00000315249 GBP7Q8N8V2 638 aaPredicted RBP14.12□□□□□ -0.15
RFFL-201ENST00000315249 DACT3Q96B18 629 aaPredicted RBP14.12□□□□□ -0.15
RFFL-201ENST00000315249 APOL5Q9BWW9 433 aa14.12□□□□□ -0.15
RFFL-201ENST00000315249 PARD6BQ9BYG5 372 aa14.12□□□□□ -0.15
RFFL-201ENST00000315249 USP20Q9Y2K6 914 aa14.12□□□□□ -0.15
RFFL-201ENST00000315249 TM4SF1P30408 202 aa14.12□□□□□ -0.15
RFFL-201ENST00000315249 CTNNB1P35222 781 aa14.12□□□□□ -0.15
RFFL-201ENST00000315249 GTF2A1P52655 376 aaPredicted RBP14.12□□□□□ -0.15
RFFL-201ENST00000315249 IFT88Q13099 833 aa14.12□□□□□ -0.15
RFFL-201ENST00000315249 MFSD4BQ5TF39 518 aa14.12□□□□□ -0.15
RFFL-201ENST00000315249 CES5AQ6NT32 575 aa14.12□□□□□ -0.15
RFFL-201ENST00000315249 ACAD11Q709F0 780 aa14.12□□□□□ -0.15
RFFL-201ENST00000315249 WDR75Q8IWA0 830 aaKnown RBP14.12□□□□□ -0.15
RFFL-201ENST00000315249 CCDC38Q502W7 563 aa14.12□□□□□ -0.15
RFFL-201ENST00000315249 MS4A14Q96JA4 679 aa14.12□□□□□ -0.15
RFFL-201ENST00000315249 LIMA1Q9UHB6 759 aaKnown RBP14.12□□□□□ -0.15
RFFL-201ENST00000315249 A0A087WUV0 522 aaPredicted RBP14.12□□□□□ -0.15
RFFL-201ENST00000315249 DIAPH2O60879 1101 aa14.12□□□□□ -0.15
RFFL-201ENST00000315249 PNMA6AP0CW24 399 aaPredicted RBP14.12□□□□□ -0.15
RFFL-201ENST00000315249 FLT3LGP49771 235 aa14.12□□□□□ -0.15
RFFL-201ENST00000315249 FBXO47Q5MNV8 452 aa14.12□□□□□ -0.15
RFFL-201ENST00000315249 RABGAP1LQ5R372 815 aa14.12□□□□□ -0.15
RFFL-201ENST00000315249 RIOX2Q8IUF8 465 aa14.12□□□□□ -0.15
RFFL-201ENST00000315249 WNK4Q96J92 1243 aa14.12□□□□□ -0.15
RFFL-201ENST00000315249 ELMO2Q96JJ3 720 aa14.12□□□□□ -0.15
RFFL-201ENST00000315249 PURBQ96QR8 312 aaKnown RBP14.12□□□□□ -0.15
RFFL-201ENST00000315249 UBR1Q8IWV7 1749 aa14.12□□□□□ -0.15
RFFL-201ENST00000315249 PCDH8O95206 1070 aa14.12□□□□□ -0.15
RFFL-201ENST00000315249 ANKS3Q6ZW76 656 aa14.12□□□□□ -0.15
RFFL-201ENST00000315249 L3MBTL1Q9Y468 752 aa14.12□□□□□ -0.15
RFFL-201ENST00000315249 REREQ9P2R6 1566 aa14.12□□□□□ -0.15
RFFL-201ENST00000315249 MAP3K6O95382 1288 aa14.12□□□□□ -0.15
RFFL-201ENST00000315249 NCAPHQ15003 741 aa14.12□□□□□ -0.15
RFFL-201ENST00000315249 PDK1Q15118 436 aa14.12□□□□□ -0.15
RFFL-201ENST00000315249 C4orf19Q8IY42 314 aa14.12□□□□□ -0.15
RFFL-201ENST00000315249 TLR8Q9NR97 1041 aaKnown RBP14.12□□□□□ -0.15
RFFL-201ENST00000315249 ARHGEF38Q9NXL2 777 aa14.12□□□□□ -0.15
RFFL-201ENST00000315249 CPSF2Q9P2I0 782 aaKnown RBP14.12□□□□□ -0.15
RFFL-201ENST00000315249 CAPN7Q9Y6W3 813 aa14.12□□□□□ -0.15
RFFL-201ENST00000315249 FAM95CA0A1B0GW59 222 aa14.11□□□□□ -0.15
RFFL-201ENST00000315249 PPFIA2O75334 1257 aa14.11□□□□□ -0.15
RFFL-201ENST00000315249 ELAVL2Q12926 359 aaKnown RBP14.11□□□□□ -0.15
RFFL-201ENST00000315249 SLC18A3Q16572 532 aa14.11□□□□□ -0.15
RFFL-201ENST00000315249 GSPT2Q8IYD1 628 aaKnown RBP14.11□□□□□ -0.15
RFFL-201ENST00000315249 ADAM33Q9BZ11 813 aa14.11□□□□□ -0.15
RFFL-201ENST00000315249 XPO7Q9UIA9 1087 aaKnown RBP14.11□□□□□ -0.15
RFFL-201ENST00000315249 INTUQ9ULD6 942 aa14.11□□□□□ -0.15
RFFL-201ENST00000315249 KCNA2P16389 499 aa14.11□□□□□ -0.15
RFFL-201ENST00000315249 ACAT1P24752 427 aaKnown RBP14.11□□□□□ -0.15
RFFL-201ENST00000315249 HMOX2P30519 316 aa14.11□□□□□ -0.15
RFFL-201ENST00000315249 RAB27AP51159 221 aa14.11□□□□□ -0.15
RFFL-201ENST00000315249 MAP2K5Q13163 448 aa14.11□□□□□ -0.15
RFFL-201ENST00000315249 C2CD6Q53TS8 623 aa14.11□□□□□ -0.15
RFFL-201ENST00000315249 SARM1Q6SZW1 724 aa14.11□□□□□ -0.15
RFFL-201ENST00000315249 KCTD17Q8N5Z5 321 aa14.11□□□□□ -0.15
RFFL-201ENST00000315249 FEZF2Q8TBJ5 459 aa14.11□□□□□ -0.15
RFFL-201ENST00000315249 CD99L2Q8TCZ2 262 aa14.11□□□□□ -0.15
RFFL-201ENST00000315249 SLC26A7Q8TE54 656 aa14.11□□□□□ -0.15
RFFL-201ENST00000315249 CAPNS2Q96L46 248 aa14.11□□□□□ -0.15
RFFL-201ENST00000315249 VPS28Q9UK41 221 aa14.11□□□□□ -0.15
RFFL-201ENST00000315249 CFAP99D6REC4 459 aa14.11□□□□□ -0.15
RFFL-201ENST00000315249 FAM133BQ5BKY9 247 aaKnown RBP14.11□□□□□ -0.15
RFFL-201ENST00000315249 ZC3H15Q8WU90 426 aaKnown RBP14.11□□□□□ -0.15
RFFL-201ENST00000315249 DDX27Q96GQ7 796 aaKnown RBP14.11□□□□□ -0.15
RFFL-201ENST00000315249 UVRAGQ9P2Y5 699 aa14.11□□□□□ -0.15
RFFL-201ENST00000315249 ESYT3A0FGR9 886 aa14.11□□□□□ -0.15
RFFL-201ENST00000315249 P3H1Q32P28 736 aa14.11□□□□□ -0.15
RFFL-201ENST00000315249 TRAPPC11Q7Z392 1133 aa14.11□□□□□ -0.15
RFFL-201ENST00000315249 SCUBE2Q9NQ36 999 aa14.11□□□□□ -0.15
RFFL-201ENST00000315249 PCDHGB4Q9UN71 923 aa14.11□□□□□ -0.15
RFFL-201ENST00000315249 PMS2P54278 862 aa14.11□□□□□ -0.15
RFFL-201ENST00000315249 NUGGCQ68CJ6 796 aa14.11□□□□□ -0.15
RFFL-201ENST00000315249 TRMT10CQ7L0Y3 403 aaKnown RBP14.11□□□□□ -0.15
RFFL-201ENST00000315249 ARHGEF26Q96DR7 871 aa14.11□□□□□ -0.15
RFFL-201ENST00000315249 RSAD1Q9HA92 442 aa14.11□□□□□ -0.15
RFFL-201ENST00000315249 AMACRQ9UHK6 382 aa14.11□□□□□ -0.15
RFFL-201ENST00000315249 MTF1Q14872 753 aa14.1□□□□□ -0.15
RFFL-201ENST00000315249 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.1□□□□□ -0.15
RFFL-201ENST00000315249 HERC6Q8IVU3 1022 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms