RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 ZNF286BP0CG31 522 aa12.2□□□□□ -0.46
PTPN2-201ENST00000309660 KRT3P12035 628 aa12.2□□□□□ -0.46
PTPN2-201ENST00000309660 TFDP1Q14186 410 aa12.2□□□□□ -0.46
PTPN2-201ENST00000309660 ERO1BQ86YB8 467 aa12.2□□□□□ -0.46
PTPN2-201ENST00000309660 JOSD2Q8TAC2 188 aa12.2□□□□□ -0.46
PTPN2-201ENST00000309660 HSPH1Q92598 858 aa12.2□□□□□ -0.46
PTPN2-201ENST00000309660 OPTNQ96CV9 577 aa12.2□□□□□ -0.46
PTPN2-201ENST00000309660 RBM41Q96IZ5 413 aaKnown RBP12.2□□□□□ -0.46
PTPN2-201ENST00000309660 SLITRK1Q96PX8 696 aa12.2□□□□□ -0.46
PTPN2-201ENST00000309660 CDT1Q9H211 546 aa12.2□□□□□ -0.46
PTPN2-201ENST00000309660 SMYD3Q9H7B4 428 aa12.2□□□□□ -0.46
PTPN2-201ENST00000309660 ADARB2Q9NS39 739 aaKnown RBP12.2□□□□□ -0.46
PTPN2-201ENST00000309660 SAMD15Q9P1V8 674 aa12.2□□□□□ -0.46
PTPN2-201ENST00000309660 HMGXB4Q9UGU5 601 aa12.2□□□□□ -0.46
PTPN2-201ENST00000309660 CENPFP49454 3210 aa12.19□□□□□ -0.46
PTPN2-201ENST00000309660 IQCF3P0C7M6 154 aa12.19□□□□□ -0.46
PTPN2-201ENST00000309660 BRAFP15056 766 aa12.19□□□□□ -0.46
PTPN2-201ENST00000309660 CDO1Q16878 200 aa12.19□□□□□ -0.46
PTPN2-201ENST00000309660 SPRED3Q2MJR0 410 aa12.19□□□□□ -0.46
PTPN2-201ENST00000309660 PTPN20Q4JDL3 420 aa12.19□□□□□ -0.46
PTPN2-201ENST00000309660 SPATS2Q86XZ4 545 aaKnown RBP12.19□□□□□ -0.46
PTPN2-201ENST00000309660 WDTC1Q8N5D0 677 aa12.19□□□□□ -0.46
PTPN2-201ENST00000309660 UBA3Q8TBC4 463 aa12.19□□□□□ -0.46
PTPN2-201ENST00000309660 CALN1Q9BXU9 219 aa12.19□□□□□ -0.46
PTPN2-201ENST00000309660 HOMER3Q9NSC5 361 aa12.19□□□□□ -0.46
PTPN2-201ENST00000309660 ZBTB42B2RXF5 422 aa12.19□□□□□ -0.46
PTPN2-201ENST00000309660 GPR25O00155 361 aa12.19□□□□□ -0.46
PTPN2-201ENST00000309660 ACKR2O00590 384 aa12.19□□□□□ -0.46
PTPN2-201ENST00000309660 BANF1O75531 89 aa12.19□□□□□ -0.46
PTPN2-201ENST00000309660 GRAP2O75791 330 aa12.19□□□□□ -0.46
PTPN2-201ENST00000309660 GH1P01241 217 aa12.19□□□□□ -0.46
PTPN2-201ENST00000309660 INSRRP14616 1297 aa12.19□□□□□ -0.46
PTPN2-201ENST00000309660 IBSPP21815 317 aaPredicted RBP12.19□□□□□ -0.46
PTPN2-201ENST00000309660 DRD4P21917 467 aa12.19□□□□□ -0.46
PTPN2-201ENST00000309660 TMEM62Q0P6H9 643 aa12.19□□□□□ -0.46
PTPN2-201ENST00000309660 SPOCD1Q6ZMY3 1216 aa12.19□□□□□ -0.46
PTPN2-201ENST00000309660 CCDC13Q8IYE1 715 aa12.19□□□□□ -0.46
PTPN2-201ENST00000309660 ANKRD13AQ8IZ07 590 aa12.19□□□□□ -0.46
PTPN2-201ENST00000309660 RCOR2Q8IZ40 523 aa12.19□□□□□ -0.46
PTPN2-201ENST00000309660 JPH2Q9BR39 696 aaPredicted RBP12.19□□□□□ -0.46
PTPN2-201ENST00000309660 C2orf40Q9H1Z8 148 aa12.19□□□□□ -0.46
PTPN2-201ENST00000309660 METTL5Q9NRN9 209 aaKnown RBP12.19□□□□□ -0.46
PTPN2-201ENST00000309660 ARID2Q68CP9 1835 aa12.19□□□□□ -0.46
PTPN2-201ENST00000309660 FAM189A1O60320 539 aa12.19□□□□□ -0.46
PTPN2-201ENST00000309660 ASPAP45381 313 aa12.19□□□□□ -0.46
PTPN2-201ENST00000309660 AP3M2P53677 418 aa12.19□□□□□ -0.46
PTPN2-201ENST00000309660 MCCD1P59942 119 aaPredicted RBP12.19□□□□□ -0.46
PTPN2-201ENST00000309660 MCL1Q07820 350 aa12.19□□□□□ -0.46
PTPN2-201ENST00000309660 FASTKD3Q14CZ7 662 aaKnown RBP12.19□□□□□ -0.46
PTPN2-201ENST00000309660 CROCCP2Q86T23 111 aa12.19□□□□□ -0.46
PTPN2-201ENST00000309660 ANKMY2Q8IV38 441 aa12.19□□□□□ -0.46
PTPN2-201ENST00000309660 CYP4X1Q8N118 509 aa12.19□□□□□ -0.46
PTPN2-201ENST00000309660 CCDC197Q8NCU1 140 aa12.19□□□□□ -0.46
PTPN2-201ENST00000309660 NLRP7Q8WX94 980 aa12.19□□□□□ -0.46
PTPN2-201ENST00000309660 HEXIM2Q96MH2 286 aaKnown RBP12.19□□□□□ -0.46
PTPN2-201ENST00000309660 SMARCAD1Q9H4L7 1026 aa12.19□□□□□ -0.46
PTPN2-201ENST00000309660 NEU2Q9Y3R4 380 aa12.19□□□□□ -0.46
PTPN2-201ENST00000309660 M0QYV0 167 aa12.18□□□□□ -0.46
PTPN2-201ENST00000309660 LIASO43766 372 aa12.18□□□□□ -0.46
PTPN2-201ENST00000309660 CNMDO75829 334 aa12.18□□□□□ -0.46
PTPN2-201ENST00000309660 TTLL4Q14679 1199 aa12.18□□□□□ -0.46
PTPN2-201ENST00000309660 NUGGCQ68CJ6 796 aa12.18□□□□□ -0.46
PTPN2-201ENST00000309660 RHBDF2Q6PJF5 856 aa12.18□□□□□ -0.46
PTPN2-201ENST00000309660 ZBED8Q8IZ13 594 aa12.18□□□□□ -0.46
PTPN2-201ENST00000309660 ATXN2LQ8WWM7 1075 aaKnown RBP12.18□□□□□ -0.46
PTPN2-201ENST00000309660 THOC1Q96FV9 657 aaKnown RBP12.18□□□□□ -0.46
PTPN2-201ENST00000309660 TWNKQ96RR1 684 aa12.18□□□□□ -0.46
PTPN2-201ENST00000309660 CCDC77Q9BR77 488 aa12.18□□□□□ -0.46
PTPN2-201ENST00000309660 PARP14Q460N5 1801 aa12.18□□□□□ -0.46
PTPN2-201ENST00000309660 A0A0G2JLL6 359 aaPredicted RBP12.18□□□□□ -0.46
PTPN2-201ENST00000309660 EXOC1LA0A1B0GW35 172 aa12.18□□□□□ -0.46
PTPN2-201ENST00000309660 LACTBL1A8MY62 500 aa12.18□□□□□ -0.46
PTPN2-201ENST00000309660 TCP11X1B4DZS4 312 aa12.18□□□□□ -0.46
PTPN2-201ENST00000309660 SOCS7O14512 581 aa12.18□□□□□ -0.46
PTPN2-201ENST00000309660 SPAG7O75391 227 aa12.18□□□□□ -0.46
PTPN2-201ENST00000309660 STAG3L1P0CL83 205 aa12.18□□□□□ -0.46
PTPN2-201ENST00000309660 MAGEA4P43358 317 aa12.18□□□□□ -0.46
PTPN2-201ENST00000309660 ZNF132P52740 706 aa12.18□□□□□ -0.46
PTPN2-201ENST00000309660 ENPEPQ07075 957 aa12.18□□□□□ -0.46
PTPN2-201ENST00000309660 JADE1Q6IE81 842 aa12.18□□□□□ -0.46
PTPN2-201ENST00000309660 SYDE1Q6ZW31 735 aaPredicted RBP12.18□□□□□ -0.46
PTPN2-201ENST00000309660 PRRT2Q7Z6L0 340 aaPredicted RBP12.18□□□□□ -0.46
PTPN2-201ENST00000309660 ANKS4BQ8N8V4 417 aa12.18□□□□□ -0.46
PTPN2-201ENST00000309660 SLCO2A1Q92959 643 aa12.18□□□□□ -0.46
PTPN2-201ENST00000309660 CPXM1Q96SM3 734 aa12.18□□□□□ -0.46
PTPN2-201ENST00000309660 OSBPL7Q9BZF2 842 aa12.18□□□□□ -0.46
PTPN2-201ENST00000309660 XYLT2Q9H1B5 865 aa12.18□□□□□ -0.46
PTPN2-201ENST00000309660 FGFR1OP2Q9NVK5 253 aa12.18□□□□□ -0.46
PTPN2-201ENST00000309660 CST8O60676 142 aa12.17□□□□□ -0.46
PTPN2-201ENST00000309660 SLC25A27O95847 323 aa12.17□□□□□ -0.46
PTPN2-201ENST00000309660 CETPP11597 493 aa12.17□□□□□ -0.46
PTPN2-201ENST00000309660 PECAM1P16284 738 aaPredicted RBP12.17□□□□□ -0.46
PTPN2-201ENST00000309660 POLR2BP30876 1174 aaKnown RBP12.17□□□□□ -0.46
PTPN2-201ENST00000309660 CNGA2Q16280 664 aa12.17□□□□□ -0.46
PTPN2-201ENST00000309660 FAM133BQ5BKY9 247 aaKnown RBP12.17□□□□□ -0.46
PTPN2-201ENST00000309660 C1orf127Q8N9H9 656 aa12.17□□□□□ -0.46
PTPN2-201ENST00000309660 FGD4Q96M96 766 aa12.17□□□□□ -0.46
PTPN2-201ENST00000309660 CYTH4Q9UIA0 394 aa12.17□□□□□ -0.46
PTPN2-201ENST00000309660 AGAP1Q9UPQ3 857 aa12.17□□□□□ -0.46
PTPN2-201ENST00000309660 RASA4BC9J798 803 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms