RNA–Protein interactions for RNA: ENST00000308298.11

SSH3-202, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 2 BASIC

Gene SSH3, Length 2,046 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-202ENST00000308298 KDM7AQ6ZMT4 941 aa21.31■■□□□ 1
SSH3-202ENST00000308298 TMEM176AQ96HP8 235 aa21.31■■□□□ 1
SSH3-202ENST00000308298 RBM41Q96IZ5 413 aaKnown RBP21.31■■□□□ 1
SSH3-202ENST00000308298 TWNKQ96RR1 684 aa21.31■■□□□ 1
SSH3-202ENST00000308298 ELOVL4Q9GZR5 314 aa21.31■■□□□ 1
SSH3-202ENST00000308298 ADAMTS10Q9H324 1103 aa21.31■■□□□ 1
SSH3-202ENST00000308298 DPP3Q9NY33 737 aa21.31■■□□□ 1
SSH3-202ENST00000308298 HMGXB4Q9UGU5 601 aa21.31■■□□□ 1
SSH3-202ENST00000308298 FEZ2Q9UHY8 353 aaPredicted RBP21.31■■□□□ 1
SSH3-202ENST00000308298 R3HDM2Q9Y2K5 976 aaKnown RBP21.31■■□□□ 1
SSH3-202ENST00000308298 STAU1O95793 577 aaKnown RBP21.3■■□□□ 1
SSH3-202ENST00000308298 F2P00734 622 aa21.3■■□□□ 1
SSH3-202ENST00000308298 ORC1Q13415 861 aa21.3■■□□□ 1
SSH3-202ENST00000308298 RCOR2Q8IZ40 523 aa21.3■■□□□ 1
SSH3-202ENST00000308298 NIPA2Q8N8Q9 360 aa21.3■■□□□ 1
SSH3-202ENST00000308298 FAM49AQ9H0Q0 323 aaPredicted RBP21.3■■□□□ 1
SSH3-202ENST00000308298 PABPC3Q9H361 631 aaKnown RBP21.3■■□□□ 1
SSH3-202ENST00000308298 CYTH4Q9UIA0 394 aa21.3■■□□□ 1
SSH3-202ENST00000308298 GNEQ9Y223 722 aaKnown RBP21.3■■□□□ 1
SSH3-202ENST00000308298 GAS8O95995 478 aa21.29■■□□□ 1
SSH3-202ENST00000308298 SMIM10L2AP0DMW4 78 aa21.29■■□□□ 1
SSH3-202ENST00000308298 SMIM10L2BP0DMW5 78 aa21.29■■□□□ 1
SSH3-202ENST00000308298 NR1D1P20393 614 aa21.29■■□□□ 1
SSH3-202ENST00000308298 EIF3BP55884 814 aaKnown RBP21.29■■□□□ 1
SSH3-202ENST00000308298 RBP5P82980 135 aa21.29■■□□□ 1
SSH3-202ENST00000308298 CDC42EP1Q00587 391 aa21.29■■□□□ 1
SSH3-202ENST00000308298 CALCOCO2Q13137 446 aa21.29■■□□□ 1
SSH3-202ENST00000308298 PTK6Q13882 451 aa21.29■■□□□ 1
SSH3-202ENST00000308298 CCNG2Q16589 344 aa21.29■■□□□ 1
SSH3-202ENST00000308298 PRAMEF19Q5SWL8 479 aa21.29■■□□□ 1
SSH3-202ENST00000308298 EMC10Q5UCC4 262 aa21.29■■□□□ 1
SSH3-202ENST00000308298 APBB1IPQ7Z5R6 666 aaPredicted RBP21.29■■□□□ 1
SSH3-202ENST00000308298 GCOM2Q9BZD3 368 aaPredicted RBP21.29■■□□□ 1
SSH3-202ENST00000308298 WHRNQ9P202 907 aa21.29■■□□□ 1
SSH3-202ENST00000308298 NRCAMQ92823 1304 aa21.29■■□□□ 1
SSH3-202ENST00000308298 F8VP50 259 aa21.29■■□□□ 1
SSH3-202ENST00000308298 TCF4P15884 667 aa21.29■■□□□ 1
SSH3-202ENST00000308298 NFX1Q12986 1120 aaKnown RBP21.29■■□□□ 1
SSH3-202ENST00000308298 LRRC31Q6UY01 552 aa21.29■■□□□ 1
SSH3-202ENST00000308298 ATL2Q8NHH9 583 aa21.29■■□□□ 1
SSH3-202ENST00000308298 RNF25Q96BH1 459 aaPredicted RBP21.29■■□□□ 1
SSH3-202ENST00000308298 KIF12Q96FN5 646 aa21.29■■□□□ 1
SSH3-202ENST00000308298 EPB41L4BQ9H329 900 aa21.29■■□□□ 1
SSH3-202ENST00000308298 CENPHQ9H3R5 247 aa21.29■■□□□ 1
SSH3-202ENST00000308298 ASIC3Q9UHC3 531 aa21.29■■□□□ 1
SSH3-202ENST00000308298 A6NNZ2 444 aa21.28■■□□□ 1
SSH3-202ENST00000308298 NPTXRO95502 500 aa21.28■■□□□ 1
SSH3-202ENST00000308298 KRT1P04264 644 aa21.28■■□□□ 1
SSH3-202ENST00000308298 NUDT17P0C025 328 aa21.28■■□□□ 1
SSH3-202ENST00000308298 HNRNPH2P55795 449 aaKnown RBP21.28■■□□□ 1
SSH3-202ENST00000308298 GSCP56915 257 aaPredicted RBP21.28■■□□□ 1
SSH3-202ENST00000308298 TMEM62Q0P6H9 643 aa21.28■■□□□ 1
SSH3-202ENST00000308298 TUBB8Q3ZCM7 444 aa21.28■■□□□ 1
SSH3-202ENST00000308298 ANKS1BQ7Z6G8 1248 aa21.28■■□□□ 1
SSH3-202ENST00000308298 CCDC114Q96M63 670 aa21.28■■□□□ 1
SSH3-202ENST00000308298 SLITRK1Q96PX8 696 aa21.28■■□□□ 1
SSH3-202ENST00000308298 FAM124BQ9H5Z6 455 aaPredicted RBP21.28■■□□□ 1
SSH3-202ENST00000308298 KLHL11Q9NVR0 708 aa21.28■■□□□ 1
SSH3-202ENST00000308298 WDR35Q9P2L0 1181 aa21.28■■□□□ 1
SSH3-202ENST00000308298 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.28■■□□□ 1
SSH3-202ENST00000308298 GINS2Q9Y248 185 aa21.28■■□□□ 1
SSH3-202ENST00000308298 TRPM7Q96QT4 1865 aa21.28■■□□□ 1
SSH3-202ENST00000308298 SIGLEC16A6NMB1 481 aa21.28■■□□□ 1
SSH3-202ENST00000308298 GOLGA8SH3BPF8 625 aa21.28■■□□□ 1
SSH3-202ENST00000308298 GPR32O75388 356 aa21.28■■□□□ 1
SSH3-202ENST00000308298 ECM2O94769 699 aaPredicted RBP21.28■■□□□ 1
SSH3-202ENST00000308298 MICAL2O94851 1124 aa21.28■■□□□ 1
SSH3-202ENST00000308298 IRAK1P51617 712 aa21.28■■□□□ 1
SSH3-202ENST00000308298 IFFO1Q0D2I5 559 aa21.28■■□□□ 1
SSH3-202ENST00000308298 INCA1Q0VD86 236 aa21.28■■□□□ 1
SSH3-202ENST00000308298 SLMAPQ14BN4 828 aa21.28■■□□□ 1
SSH3-202ENST00000308298 ATP13A4Q4VNC1 1196 aa21.28■■□□□ 1
SSH3-202ENST00000308298 ZFYVE27Q5T4F4 411 aa21.28■■□□□ 1
SSH3-202ENST00000308298 AGBL2Q5U5Z8 902 aa21.28■■□□□ 1
SSH3-202ENST00000308298 CST9Q5W186 159 aa21.28■■□□□ 1
SSH3-202ENST00000308298 CATSPER4Q7RTX7 472 aa21.28■■□□□ 1
SSH3-202ENST00000308298 TLK2Q86UE8 772 aa21.28■■□□□ 1
SSH3-202ENST00000308298 KAT2BQ92831 832 aa21.28■■□□□ 1
SSH3-202ENST00000308298 TJP2Q9UDY2 1190 aa21.28■■□□□ 1
SSH3-202ENST00000308298 BARX2Q9UMQ3 279 aaPredicted RBP21.28■■□□□ 1
SSH3-202ENST00000308298 SMIM35A0A1B0GVV1 85 aa21.27■■□□□ 1
SSH3-202ENST00000308298 PI4K2BG5E9Z4 385 aa21.27■■□□□ 1
SSH3-202ENST00000308298 VDRP11473 427 aa21.27■■□□□ 1
SSH3-202ENST00000308298 KRT3P12035 628 aa21.27■■□□□ 1
SSH3-202ENST00000308298 HOXA11P31270 313 aaPredicted RBP21.27■■□□□ 1
SSH3-202ENST00000308298 ATP1A2P50993 1020 aa21.27■■□□□ 1
SSH3-202ENST00000308298 HUNKP57058 714 aa21.27■■□□□ 1
SSH3-202ENST00000308298 PSMC1P62191 440 aaKnown RBP21.27■■□□□ 1
SSH3-202ENST00000308298 GNGT1P63211 74 aa21.27■■□□□ 1
SSH3-202ENST00000308298 DENND2CQ68D51 928 aa21.27■■□□□ 1
SSH3-202ENST00000308298 SLC27A1Q6PCB7 646 aa21.27■■□□□ 1
SSH3-202ENST00000308298 TTC39CQ8N584 583 aa21.27■■□□□ 1
SSH3-202ENST00000308298 SNF8Q96H20 258 aa21.27■■□□□ 1
SSH3-202ENST00000308298 CPXM1Q96SM3 734 aa21.27■■□□□ 1
SSH3-202ENST00000308298 PLEKHA5Q9HAU0 1116 aa21.27■■□□□ 1
SSH3-202ENST00000308298 DDX56Q9NY93 547 aaKnown RBP21.27■■□□□ 1
SSH3-202ENST00000308298 FLRT1Q9NZU1 646 aa21.27■■□□□ 1
SSH3-202ENST00000308298 CALCOCO1Q9P1Z2 691 aa21.27■■□□□ 1
SSH3-202ENST00000308298 DERAQ9Y315 318 aa21.27■■□□□ 1
SSH3-202ENST00000308298 MBLAC1A4D2B0 266 aaPredicted RBP21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms