RNA–Protein interactions for RNA: ENST00000308161.8

HMGCLL1-202, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-202ENST00000308161 GPIHBP1Q8IV16 184 aa18.31■□□□□ 0.52
HMGCLL1-202ENST00000308161 WDR49Q8IV35 697 aa18.31■□□□□ 0.52
HMGCLL1-202ENST00000308161 ADGRF2Q8IZF7 708 aa18.31■□□□□ 0.52
HMGCLL1-202ENST00000308161 CXorf38Q8TB03 319 aa18.31■□□□□ 0.52
HMGCLL1-202ENST00000308161 ZSCAN18Q8TBC5 510 aaPredicted RBP18.31■□□□□ 0.52
HMGCLL1-202ENST00000308161 HPDLQ96IR7 371 aa18.31■□□□□ 0.52
HMGCLL1-202ENST00000308161 ASB16Q96NS5 453 aa18.31■□□□□ 0.52
HMGCLL1-202ENST00000308161 FOXQ1Q9C009 403 aa18.31■□□□□ 0.52
HMGCLL1-202ENST00000308161 SCAND2PQ9GZW5 306 aaPredicted RBP18.31■□□□□ 0.52
HMGCLL1-202ENST00000308161 ATXN3LQ9H3M9 355 aa18.31■□□□□ 0.52
HMGCLL1-202ENST00000308161 ZNF334Q9HCZ1 680 aaPredicted RBP18.31■□□□□ 0.52
HMGCLL1-202ENST00000308161 HCRTO43612 131 aa18.3■□□□□ 0.52
HMGCLL1-202ENST00000308161 EXOC3O60645 756 aa18.3■□□□□ 0.52
HMGCLL1-202ENST00000308161 MICAL2O94851 1124 aa18.3■□□□□ 0.52
HMGCLL1-202ENST00000308161 DCNP07585 359 aaKnown RBP18.3■□□□□ 0.52
HMGCLL1-202ENST00000308161 ATF6P18850 670 aa18.3■□□□□ 0.52
HMGCLL1-202ENST00000308161 FCARP24071 287 aa18.3■□□□□ 0.52
HMGCLL1-202ENST00000308161 GABRR2P28476 465 aa18.3■□□□□ 0.52
HMGCLL1-202ENST00000308161 HOXD11P31277 338 aaPredicted RBP18.3■□□□□ 0.52
HMGCLL1-202ENST00000308161 VIPR2P41587 438 aa18.3■□□□□ 0.52
HMGCLL1-202ENST00000308161 MRE11P49959 708 aa18.3■□□□□ 0.52
HMGCLL1-202ENST00000308161 NUBP1P53384 320 aa18.3■□□□□ 0.52
HMGCLL1-202ENST00000308161 PFKPQ01813 784 aa18.3■□□□□ 0.52
HMGCLL1-202ENST00000308161 CYP24A1Q07973 514 aa18.3■□□□□ 0.52
HMGCLL1-202ENST00000308161 STK4Q13043 487 aa18.3■□□□□ 0.52
HMGCLL1-202ENST00000308161 BMT2Q1RMZ1 405 aa18.3■□□□□ 0.52
HMGCLL1-202ENST00000308161 STXBP5Q5T5C0 1151 aa18.3■□□□□ 0.52
HMGCLL1-202ENST00000308161 OSTM1Q86WC4 334 aa18.3■□□□□ 0.52
HMGCLL1-202ENST00000308161 KIAA0895Q8NCT3 520 aa18.3■□□□□ 0.52
HMGCLL1-202ENST00000308161 SPPL2BQ8TCT7 592 aa18.3■□□□□ 0.52
HMGCLL1-202ENST00000308161 SMARCD2Q92925 531 aa18.3■□□□□ 0.52
HMGCLL1-202ENST00000308161 PSMG2Q969U7 264 aa18.3■□□□□ 0.52
HMGCLL1-202ENST00000308161 ELSPBP1Q96BH3 223 aa18.3■□□□□ 0.52
HMGCLL1-202ENST00000308161 SHDQ96IW2 340 aa18.3■□□□□ 0.52
HMGCLL1-202ENST00000308161 PI4K2AQ9BTU6 479 aa18.3■□□□□ 0.52
HMGCLL1-202ENST00000308161 TMLHEQ9NVH6 421 aa18.3■□□□□ 0.52
HMGCLL1-202ENST00000308161 USP25Q9UHP3 1055 aa18.3■□□□□ 0.52
HMGCLL1-202ENST00000308161 HPSEQ9Y251 543 aa18.3■□□□□ 0.52
HMGCLL1-202ENST00000308161 ASB3Q9Y575 518 aa18.3■□□□□ 0.52
HMGCLL1-202ENST00000308161 PCDHB5Q9Y5E4 795 aa18.3■□□□□ 0.52
HMGCLL1-202ENST00000308161 PRPF40AO75400 957 aaKnown RBP18.29■□□□□ 0.52
HMGCLL1-202ENST00000308161 PRR29P0C7W0 189 aa18.29■□□□□ 0.52
HMGCLL1-202ENST00000308161 SNRPFP62306 86 aaKnown RBP18.29■□□□□ 0.52
HMGCLL1-202ENST00000308161 PSMD6Q15008 389 aa18.29■□□□□ 0.52
HMGCLL1-202ENST00000308161 MLF2Q15773 248 aaPredicted RBP18.29■□□□□ 0.52
HMGCLL1-202ENST00000308161 SLC44A4Q53GD3 710 aa18.29■□□□□ 0.52
HMGCLL1-202ENST00000308161 TRAPPC11Q7Z392 1133 aa18.29■□□□□ 0.52
HMGCLL1-202ENST00000308161 TMEM86AQ8N2M4 240 aa18.29■□□□□ 0.52
HMGCLL1-202ENST00000308161 TOP6BLQ8N6T0 577 aa18.29■□□□□ 0.52
HMGCLL1-202ENST00000308161 C2orf15Q8WU43 125 aaKnown RBP18.29■□□□□ 0.52
HMGCLL1-202ENST00000308161 MMS19Q96T76 1030 aa18.29■□□□□ 0.52
HMGCLL1-202ENST00000308161 CGRRF1Q99675 332 aa18.29■□□□□ 0.52
HMGCLL1-202ENST00000308161 LRRC3Q9BY71 257 aa18.29■□□□□ 0.52
HMGCLL1-202ENST00000308161 BRD9Q9H8M2 597 aa18.29■□□□□ 0.52
HMGCLL1-202ENST00000308161 GDAP2Q9NXN4 497 aa18.29■□□□□ 0.52
HMGCLL1-202ENST00000308161 HSFX1Q9UBD0 423 aa18.29■□□□□ 0.52
HMGCLL1-202ENST00000308161 SIT1Q9Y3P8 196 aa18.29■□□□□ 0.52
HMGCLL1-202ENST00000308161 COL4A3Q01955 1670 aa18.29■□□□□ 0.52
HMGCLL1-202ENST00000308161 HAPLN1P10915 354 aaPredicted RBP18.28■□□□□ 0.52
HMGCLL1-202ENST00000308161 CD72P21854 359 aa18.28■□□□□ 0.52
HMGCLL1-202ENST00000308161 GPR15P49685 360 aa18.28■□□□□ 0.52
HMGCLL1-202ENST00000308161 CYP4F8P98187 520 aa18.28■□□□□ 0.52
HMGCLL1-202ENST00000308161 SMARCB1Q12824 385 aa18.28■□□□□ 0.52
HMGCLL1-202ENST00000308161 UBXN2BQ14CS0 331 aa18.28■□□□□ 0.52
HMGCLL1-202ENST00000308161 CCDC142Q17RM4 750 aa18.28■□□□□ 0.52
HMGCLL1-202ENST00000308161 INTS6LQ5JSJ4 861 aaKnown RBP18.28■□□□□ 0.52
HMGCLL1-202ENST00000308161 GPR158Q5T848 1215 aa18.28■□□□□ 0.52
HMGCLL1-202ENST00000308161 CCDC105Q8IYK2 499 aa18.28■□□□□ 0.52
HMGCLL1-202ENST00000308161 DTWD2Q8NBA8 298 aa18.28■□□□□ 0.52
HMGCLL1-202ENST00000308161 STKLD1Q8NE28 680 aa18.28■□□□□ 0.52
HMGCLL1-202ENST00000308161 GOLGA5Q8TBA6 731 aa18.28■□□□□ 0.52
HMGCLL1-202ENST00000308161 CCDC47Q96A33 483 aaKnown RBP18.28■□□□□ 0.52
HMGCLL1-202ENST00000308161 GCNAQ96QF7 691 aa18.28■□□□□ 0.52
HMGCLL1-202ENST00000308161 TRMT61BQ9BVS5 477 aaKnown RBP18.28■□□□□ 0.52
HMGCLL1-202ENST00000308161 IRF2BPLQ9H1B7 796 aa18.28■□□□□ 0.52
HMGCLL1-202ENST00000308161 GOLPH3LQ9H4A5 285 aa18.28■□□□□ 0.52
HMGCLL1-202ENST00000308161 CGNQ9P2M7 1197 aaKnown RBP18.28■□□□□ 0.52
HMGCLL1-202ENST00000308161 GTF3C4Q9UKN8 822 aa18.28■□□□□ 0.52
HMGCLL1-202ENST00000308161 CACNA1HO95180 2353 aa18.28■□□□□ 0.52
HMGCLL1-202ENST00000308161 PIEZO1Q92508 2521 aa18.27■□□□□ 0.52
HMGCLL1-202ENST00000308161 LRRN2O75325 713 aa18.27■□□□□ 0.52
HMGCLL1-202ENST00000308161 RPN1P04843 607 aaKnown RBP18.27■□□□□ 0.52
HMGCLL1-202ENST00000308161 GDI1P31150 447 aa18.27■□□□□ 0.52
HMGCLL1-202ENST00000308161 LHX1P48742 406 aa18.27■□□□□ 0.52
HMGCLL1-202ENST00000308161 CASP4P49662 377 aa18.27■□□□□ 0.52
HMGCLL1-202ENST00000308161 PSMD2Q13200 908 aa18.27■□□□□ 0.52
HMGCLL1-202ENST00000308161 NFE2Q16621 373 aaPredicted RBP18.27■□□□□ 0.52
HMGCLL1-202ENST00000308161 SOWAHAQ2M3V2 549 aa18.27■□□□□ 0.52
HMGCLL1-202ENST00000308161 ARHGAP15Q53QZ3 475 aa18.27■□□□□ 0.52
HMGCLL1-202ENST00000308161 SDHAF4Q5VUM1 108 aa18.27■□□□□ 0.52
HMGCLL1-202ENST00000308161 PHLDB3Q6NSJ2 640 aa18.27■□□□□ 0.52
HMGCLL1-202ENST00000308161 VITQ6UXI7 678 aa18.27■□□□□ 0.52
HMGCLL1-202ENST00000308161 TPRG1Q6ZUI0 275 aa18.27■□□□□ 0.52
HMGCLL1-202ENST00000308161 GAREM2Q75VX8 874 aa18.27■□□□□ 0.52
HMGCLL1-202ENST00000308161 ACBD6Q9BR61 282 aa18.27■□□□□ 0.52
HMGCLL1-202ENST00000308161 GPR88Q9GZN0 384 aa18.27■□□□□ 0.52
HMGCLL1-202ENST00000308161 HEBP1Q9NRV9 189 aa18.27■□□□□ 0.52
HMGCLL1-202ENST00000308161 MAGED2Q9UNF1 606 aaPredicted RBP18.27■□□□□ 0.52
HMGCLL1-202ENST00000308161 HEPACAM2A8MVW5 462 aa18.26■□□□□ 0.51
HMGCLL1-202ENST00000308161 PHACTR2O75167 634 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms