RNA–Protein interactions for RNA: ENST00000306627.7

UBE2E1-201, Transcript of ubiquitin conjugating enzyme E2 E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2E1, Length 1,511 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E1-201ENST00000306627 PCDHB7Q9Y5E2 793 aa20.54■□□□□ 0.88
UBE2E1-201ENST00000306627 LTBP2Q14767 1821 aa20.54■□□□□ 0.88
UBE2E1-201ENST00000306627 HUS1O60921 280 aa20.53■□□□□ 0.88
UBE2E1-201ENST00000306627 AARSP49588 968 aaKnown RBP eCLIP20.53■□□□□ 0.88
UBE2E1-201ENST00000306627 DSC1Q08554 894 aa20.53■□□□□ 0.88
UBE2E1-201ENST00000306627 PAN2Q504Q3 1202 aaKnown RBP20.53■□□□□ 0.88
UBE2E1-201ENST00000306627 C2CD6Q53TS8 623 aa20.53■□□□□ 0.88
UBE2E1-201ENST00000306627 WSCD1Q658N2 575 aa20.53■□□□□ 0.88
UBE2E1-201ENST00000306627 MON1BQ7L1V2 547 aa20.53■□□□□ 0.88
UBE2E1-201ENST00000306627 ACOT1Q86TX2 421 aa20.53■□□□□ 0.88
UBE2E1-201ENST00000306627 ADGRF2Q8IZF7 708 aa20.53■□□□□ 0.88
UBE2E1-201ENST00000306627 MCOLN2Q8IZK6 566 aa20.53■□□□□ 0.88
UBE2E1-201ENST00000306627 C12orf29Q8N999 325 aa20.53■□□□□ 0.88
UBE2E1-201ENST00000306627 C1orf131Q8NDD1 294 aaKnown RBP20.53■□□□□ 0.88
UBE2E1-201ENST00000306627 SLC35G2Q8TBE7 412 aa20.53■□□□□ 0.88
UBE2E1-201ENST00000306627 RFFLQ8WZ73 363 aa20.53■□□□□ 0.88
UBE2E1-201ENST00000306627 NR2E3Q9Y5X4 410 aa20.53■□□□□ 0.88
UBE2E1-201ENST00000306627 FNDC1Q4ZHG4 1894 aaPredicted RBP20.53■□□□□ 0.88
UBE2E1-201ENST00000306627 GRID2IPA4D2P6 1211 aa20.53■□□□□ 0.88
UBE2E1-201ENST00000306627 I3L4J1 428 aa20.53■□□□□ 0.88
UBE2E1-201ENST00000306627 O00370 1275 aa20.53■□□□□ 0.88
UBE2E1-201ENST00000306627 ITGB1P05556 798 aa20.53■□□□□ 0.88
UBE2E1-201ENST00000306627 VDRP11473 427 aa20.53■□□□□ 0.88
UBE2E1-201ENST00000306627 WARSP23381 471 aaKnown RBP20.53■□□□□ 0.88
UBE2E1-201ENST00000306627 CDH5P33151 784 aaPredicted RBP20.53■□□□□ 0.88
UBE2E1-201ENST00000306627 NAP1L1P55209 391 aaKnown RBP20.53■□□□□ 0.88
UBE2E1-201ENST00000306627 GPC5P78333 572 aa20.53■□□□□ 0.88
UBE2E1-201ENST00000306627 TIGD5Q53EQ6 642 aa20.53■□□□□ 0.88
UBE2E1-201ENST00000306627 LLGL2Q6P1M3 1020 aa20.53■□□□□ 0.88
UBE2E1-201ENST00000306627 CHRDL2Q6WN34 429 aa20.53■□□□□ 0.88
UBE2E1-201ENST00000306627 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.53■□□□□ 0.881e-10■■■■□ 23.8
UBE2E1-201ENST00000306627 UNC93AQ86WB7 457 aa20.53■□□□□ 0.88
UBE2E1-201ENST00000306627 TRIM58Q8NG06 486 aa20.53■□□□□ 0.88
UBE2E1-201ENST00000306627 URGCPQ8TCY9 931 aa20.53■□□□□ 0.88
UBE2E1-201ENST00000306627 ZNF653Q96CK0 615 aa20.53■□□□□ 0.88
UBE2E1-201ENST00000306627 DDX27Q96GQ7 796 aaKnown RBP20.53■□□□□ 0.88
UBE2E1-201ENST00000306627 CASD1Q96PB1 797 aa20.53■□□□□ 0.88
UBE2E1-201ENST00000306627 PRDM5Q9NQX1 630 aaPredicted RBP20.53■□□□□ 0.88
UBE2E1-201ENST00000306627 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.53■□□□□ 0.88
UBE2E1-201ENST00000306627 PCDHGC5Q9Y5F6 944 aa20.53■□□□□ 0.88
UBE2E1-201ENST00000306627 A8MXQ7 604 aa20.52■□□□□ 0.87
UBE2E1-201ENST00000306627 ENC1O14682 589 aa20.52■□□□□ 0.87
UBE2E1-201ENST00000306627 KIAA0355O15063 1070 aa20.52■□□□□ 0.87
UBE2E1-201ENST00000306627 PALMO75781 387 aa20.52■□□□□ 0.87
UBE2E1-201ENST00000306627 MICAL2O94851 1124 aa20.52■□□□□ 0.87
UBE2E1-201ENST00000306627 TIMP1P01033 207 aa20.52■□□□□ 0.87
UBE2E1-201ENST00000306627 ATP1A1P05023 1023 aaKnown RBP20.52■□□□□ 0.87
UBE2E1-201ENST00000306627 CYP1A2P05177 515 aa20.52■□□□□ 0.87
UBE2E1-201ENST00000306627 PDGFRBP09619 1106 aa20.52■□□□□ 0.87
UBE2E1-201ENST00000306627 GNL1P36915 607 aaPredicted RBP20.52■□□□□ 0.87
UBE2E1-201ENST00000306627 NOP2P46087 812 aaKnown RBP20.52■□□□□ 0.87
UBE2E1-201ENST00000306627 NSFP46459 744 aaKnown RBP20.52■□□□□ 0.87
UBE2E1-201ENST00000306627 BRCC3P46736 316 aa20.52■□□□□ 0.87
UBE2E1-201ENST00000306627 PTP4A2Q12974 167 aa20.52■□□□□ 0.87
UBE2E1-201ENST00000306627 SGO2Q562F6 1265 aa20.52■□□□□ 0.87
UBE2E1-201ENST00000306627 CNKSR3Q6P9H4 555 aa20.52■□□□□ 0.87
UBE2E1-201ENST00000306627 FAM43BQ6ZT52 329 aaPredicted RBP20.52■□□□□ 0.87
UBE2E1-201ENST00000306627 DPH6Q7L8W6 267 aa20.52■□□□□ 0.87
UBE2E1-201ENST00000306627 PHF13Q86YI8 300 aaPredicted RBP20.52■□□□□ 0.87
UBE2E1-201ENST00000306627 COLGALT2Q8IYK4 626 aa20.52■□□□□ 0.87
UBE2E1-201ENST00000306627 TPCN2Q8NHX9 752 aa20.52■□□□□ 0.87
UBE2E1-201ENST00000306627 HASPINQ8TF76 798 aa20.52■□□□□ 0.87
UBE2E1-201ENST00000306627 UROC1Q96N76 676 aa20.52■□□□□ 0.87
UBE2E1-201ENST00000306627 NAPGQ99747 312 aaPredicted RBP20.52■□□□□ 0.87
UBE2E1-201ENST00000306627 CYTH4Q9UIA0 394 aa20.52■□□□□ 0.87
UBE2E1-201ENST00000306627 GTF3C4Q9UKN8 822 aa20.52■□□□□ 0.87
UBE2E1-201ENST00000306627 STXBP5LQ9Y2K9 1186 aa20.52■□□□□ 0.87
UBE2E1-201ENST00000306627 TIMM13Q9Y5L4 95 aaPredicted RBP20.52■□□□□ 0.87
UBE2E1-201ENST00000306627 MED7O43513 233 aa20.51■□□□□ 0.87
UBE2E1-201ENST00000306627 B3GAT3O94766 335 aa20.51■□□□□ 0.87
UBE2E1-201ENST00000306627 KIF4AO95239 1232 aa20.51■□□□□ 0.87
UBE2E1-201ENST00000306627 LSM8O95777 96 aaKnown RBP20.51■□□□□ 0.87
UBE2E1-201ENST00000306627 CNGA2Q16280 664 aa20.51■□□□□ 0.87
UBE2E1-201ENST00000306627 PHLDB2Q86SQ0 1253 aa20.51■□□□□ 0.87
UBE2E1-201ENST00000306627 LRRC57Q8N9N7 239 aa20.51■□□□□ 0.87
UBE2E1-201ENST00000306627 C11orf70Q9BRQ4 267 aa20.51■□□□□ 0.87
UBE2E1-201ENST00000306627 SNX25Q9H3E2 840 aa20.51■□□□□ 0.87
UBE2E1-201ENST00000306627 GOLPH3Q9H4A6 298 aa20.51■□□□□ 0.87
UBE2E1-201ENST00000306627 HCSTQ9UBK5 93 aa20.51■□□□□ 0.87
UBE2E1-201ENST00000306627 DNAJB4Q9UDY4 337 aa20.51■□□□□ 0.87
UBE2E1-201ENST00000306627 LRFN2Q9ULH4 789 aa20.51■□□□□ 0.87
UBE2E1-201ENST00000306627 CTAGE9A4FU28 777 aa20.5■□□□□ 0.87
UBE2E1-201ENST00000306627 GABRDO14764 452 aa20.5■□□□□ 0.87
UBE2E1-201ENST00000306627 RFC2P35250 354 aa20.5■□□□□ 0.87
UBE2E1-201ENST00000306627 TCEAL1Q15170 157 aa20.5■□□□□ 0.87
UBE2E1-201ENST00000306627 CCDC142Q17RM4 750 aa20.5■□□□□ 0.87
UBE2E1-201ENST00000306627 PPP1R26Q5T8A7 1209 aaPredicted RBP20.5■□□□□ 0.87
UBE2E1-201ENST00000306627 DSTYKQ6XUX3 929 aa20.5■□□□□ 0.87
UBE2E1-201ENST00000306627 MMS22LQ6ZRQ5 1243 aa20.5■□□□□ 0.87
UBE2E1-201ENST00000306627 CRYBG2Q8N1P7 616 aa20.5■□□□□ 0.87
UBE2E1-201ENST00000306627 TMEM35BQ8NCS4 154 aa20.5■□□□□ 0.87
UBE2E1-201ENST00000306627 ALS2CR12Q96Q35 445 aa20.5■□□□□ 0.87
UBE2E1-201ENST00000306627 LHX5Q9H2C1 402 aa20.5■□□□□ 0.87
UBE2E1-201ENST00000306627 FAM49BQ9NUQ9 324 aa20.5■□□□□ 0.87
UBE2E1-201ENST00000306627 KANSL3Q9P2N6 904 aa20.5■□□□□ 0.87
UBE2E1-201ENST00000306627 CNOT8Q9UFF9 292 aaKnown RBP20.5■□□□□ 0.87
UBE2E1-201ENST00000306627 KIAA1257Q9ULG3 409 aa20.5■□□□□ 0.87
UBE2E1-201ENST00000306627 COL4A6Q14031 1691 aa20.5■□□□□ 0.87
UBE2E1-201ENST00000306627 URI1O94763 535 aaPredicted RBP20.49■□□□□ 0.87
UBE2E1-201ENST00000306627 CSF2RAP15509 400 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms