RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 PCMTD2Q9NV79 361 aa16.66■□□□□ 0.26
USP42-201ENST00000306177 CHORDC1Q9UHD1 332 aaPredicted RBP16.66■□□□□ 0.26
USP42-201ENST00000306177 SNRPAP09012 282 aaKnown RBP16.66■□□□□ 0.26
USP42-201ENST00000306177 SETSIPP0DME0 302 aa16.66■□□□□ 0.26
USP42-201ENST00000306177 KRT4P19013 534 aa16.66■□□□□ 0.26
USP42-201ENST00000306177 GTF2A2P52657 109 aa16.66■□□□□ 0.26
USP42-201ENST00000306177 THEMIS2Q5TEJ8 643 aa16.66■□□□□ 0.26
USP42-201ENST00000306177 NUDT18Q6ZVK8 323 aa16.66■□□□□ 0.26
USP42-201ENST00000306177 ERO1BQ86YB8 467 aa16.66■□□□□ 0.26
USP42-201ENST00000306177 CALML6Q8TD86 181 aa16.66■□□□□ 0.26
USP42-201ENST00000306177 KCNV2Q8TDN2 545 aa16.66■□□□□ 0.26
USP42-201ENST00000306177 ELMO2Q96JJ3 720 aa16.66■□□□□ 0.26
USP42-201ENST00000306177 CASS4Q9NQ75 786 aa16.66■□□□□ 0.26
USP42-201ENST00000306177 C17orf102A2RUQ5 167 aa16.66■□□□□ 0.26
USP42-201ENST00000306177 PGM1P36871 562 aa16.66■□□□□ 0.26
USP42-201ENST00000306177 CDR2LQ86X02 465 aaPredicted RBP16.66■□□□□ 0.26
USP42-201ENST00000306177 SGPL1O95470 568 aa16.66■□□□□ 0.26
USP42-201ENST00000306177 MKRN4PQ13434 485 aaPredicted RBP16.66■□□□□ 0.26
USP42-201ENST00000306177 NBPF12Q5TAG4 269 aaPredicted RBP16.66■□□□□ 0.26
USP42-201ENST00000306177 NFIBO00712 420 aa16.65■□□□□ 0.26
USP42-201ENST00000306177 NCAM1P13591 858 aa16.65■□□□□ 0.26
USP42-201ENST00000306177 MGAT5BQ3V5L5 792 aa16.65■□□□□ 0.26
USP42-201ENST00000306177 CENPPQ6IPU0 288 aa16.65■□□□□ 0.26
USP42-201ENST00000306177 FAM83AQ86UY5 434 aa16.65■□□□□ 0.26
USP42-201ENST00000306177 RIN2Q8WYP3 895 aaPredicted RBP16.65■□□□□ 0.26
USP42-201ENST00000306177 TRIM45Q9H8W5 580 aaPredicted RBP16.65■□□□□ 0.26
USP42-201ENST00000306177 C20orf96Q9NUD7 363 aaPredicted RBP16.65■□□□□ 0.26
USP42-201ENST00000306177 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.65■□□□□ 0.26
USP42-201ENST00000306177 OR1G1P47890 313 aa16.65■□□□□ 0.26
USP42-201ENST00000306177 CASP4P49662 377 aa16.65■□□□□ 0.26
USP42-201ENST00000306177 LRRC8EQ6NSJ5 796 aa16.65■□□□□ 0.26
USP42-201ENST00000306177 MPZL3Q6UWV2 235 aa16.65■□□□□ 0.26
USP42-201ENST00000306177 VGLL2Q8N8G2 317 aa16.65■□□□□ 0.26
USP42-201ENST00000306177 CBWD1Q9BRT8 395 aa16.65■□□□□ 0.26
USP42-201ENST00000306177 NPHS2Q9NP85 383 aa16.65■□□□□ 0.26
USP42-201ENST00000306177 ADARB2Q9NS39 739 aaKnown RBP16.65■□□□□ 0.26
USP42-201ENST00000306177 NDUFS3O75489 264 aa16.65■□□□□ 0.26
USP42-201ENST00000306177 RAD23BP54727 409 aa16.65■□□□□ 0.26
USP42-201ENST00000306177 TTC39BQ5VTQ0 682 aaPredicted RBP16.65■□□□□ 0.26
USP42-201ENST00000306177 FAM71DQ8N9W8 422 aa16.65■□□□□ 0.26
USP42-201ENST00000306177 TASP1Q9H6P5 420 aa16.65■□□□□ 0.26
USP42-201ENST00000306177 CCDC78A2IDD5 438 aa16.65■□□□□ 0.26
USP42-201ENST00000306177 KDSRQ06136 332 aa16.65■□□□□ 0.26
USP42-201ENST00000306177 ICA1LQ8NDH6 482 aa16.65■□□□□ 0.26
USP42-201ENST00000306177 HNRNPLLQ8WVV9 542 aaKnown RBP16.65■□□□□ 0.26
USP42-201ENST00000306177 MROH8Q9H579 483 aa16.65■□□□□ 0.26
USP42-201ENST00000306177 GPBP1L1Q9HC44 474 aaPredicted RBP16.65■□□□□ 0.26
USP42-201ENST00000306177 SLC30A1Q9Y6M5 507 aa16.65■□□□□ 0.26
USP42-201ENST00000306177 TMEM120BA0PK00 339 aa16.64■□□□□ 0.25
USP42-201ENST00000306177 HIST1H2AGP0C0S8 130 aaPredicted RBP16.64■□□□□ 0.25
USP42-201ENST00000306177 HIST1H2ADP20671 130 aa16.64■□□□□ 0.25
USP42-201ENST00000306177 MAPRE1Q15691 268 aaKnown RBP16.64■□□□□ 0.25
USP42-201ENST00000306177 SEZ6Q53EL9 994 aa16.64■□□□□ 0.25
USP42-201ENST00000306177 ZNF720Q7Z2F6 126 aa16.64■□□□□ 0.25
USP42-201ENST00000306177 C4orf19Q8IY42 314 aa16.64■□□□□ 0.25
USP42-201ENST00000306177 TMC2Q8TDI7 906 aa16.64■□□□□ 0.25
USP42-201ENST00000306177 HIST1H2AHQ96KK5 128 aa16.64■□□□□ 0.25
USP42-201ENST00000306177 HIST1H2AJQ99878 128 aa16.64■□□□□ 0.25
USP42-201ENST00000306177 H2AFJQ9BTM1 129 aa16.64■□□□□ 0.25
USP42-201ENST00000306177 MUC3BQ9H195 1237 aa16.64■□□□□ 0.25
USP42-201ENST00000306177 PXMP2Q9NR77 195 aa16.64■□□□□ 0.25
USP42-201ENST00000306177 PCDHGB4Q9UN71 923 aa16.64■□□□□ 0.25
USP42-201ENST00000306177 SNX5Q9Y5X3 404 aa16.64■□□□□ 0.25
USP42-201ENST00000306177 SYCE1LA8MT33 242 aa16.64■□□□□ 0.25
USP42-201ENST00000306177 PHF20L1A8MW92 1017 aa16.64■□□□□ 0.25
USP42-201ENST00000306177 ANGPT2O15123 496 aa16.64■□□□□ 0.25
USP42-201ENST00000306177 ENO1P06733 434 aaKnown RBP16.64■□□□□ 0.25
USP42-201ENST00000306177 HMOX2P30519 316 aa16.64■□□□□ 0.25
USP42-201ENST00000306177 ABCE1P61221 599 aaKnown RBP16.64■□□□□ 0.25
USP42-201ENST00000306177 MTMR12Q9C0I1 747 aa16.64■□□□□ 0.25
USP42-201ENST00000306177 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.64■□□□□ 0.25
USP42-201ENST00000306177 KIAA1257Q9ULG3 409 aa16.64■□□□□ 0.25
USP42-201ENST00000306177 PRRG1O14668 218 aa16.64■□□□□ 0.25
USP42-201ENST00000306177 STIP1P31948 543 aaKnown RBP16.64■□□□□ 0.25
USP42-201ENST00000306177 ST3GAL1Q11201 340 aa16.64■□□□□ 0.25
USP42-201ENST00000306177 SREBF2Q12772 1141 aa16.64■□□□□ 0.25
USP42-201ENST00000306177 RARS2Q5T160 578 aaKnown RBP16.64■□□□□ 0.25
USP42-201ENST00000306177 YAF2Q8IY57 180 aa16.64■□□□□ 0.25
USP42-201ENST00000306177 CEP19Q96LK0 163 aa16.64■□□□□ 0.25
USP42-201ENST00000306177 SLC4A9Q96Q91 983 aa16.64■□□□□ 0.25
USP42-201ENST00000306177 CGRRF1Q99675 332 aa16.64■□□□□ 0.25
USP42-201ENST00000306177 TEX12Q9BXU0 123 aa16.64■□□□□ 0.25
USP42-201ENST00000306177 FRMD8P1Q9BZ68 369 aaPredicted RBP16.64■□□□□ 0.25
USP42-201ENST00000306177 KDM4CQ9H3R0 1056 aa16.64■□□□□ 0.25
USP42-201ENST00000306177 CYP11B1P15538 503 aa16.64■□□□□ 0.25
USP42-201ENST00000306177 PTK2BQ14289 1009 aa16.64■□□□□ 0.25
USP42-201ENST00000306177 PCSK7Q16549 785 aa16.64■□□□□ 0.25
USP42-201ENST00000306177 CDKAL1Q5VV42 579 aa16.64■□□□□ 0.25
USP42-201ENST00000306177 NAPEPLDQ6IQ20 393 aa16.64■□□□□ 0.25
USP42-201ENST00000306177 UPP2O95045 317 aa16.63■□□□□ 0.25
USP42-201ENST00000306177 MYL2P10916 166 aa16.63■□□□□ 0.25
USP42-201ENST00000306177 IL10P22301 178 aa16.63■□□□□ 0.25
USP42-201ENST00000306177 ST8SIA6P61647 398 aa16.63■□□□□ 0.25
USP42-201ENST00000306177 MAPK7Q13164 816 aa16.63■□□□□ 0.25
USP42-201ENST00000306177 MFN1Q8IWA4 741 aa16.63■□□□□ 0.25
USP42-201ENST00000306177 AGO4Q9HCK5 861 aaKnown RBP16.63■□□□□ 0.25
USP42-201ENST00000306177 KLC4Q9NSK0 619 aa16.63■□□□□ 0.25
USP42-201ENST00000306177 GGT7Q9UJ14 662 aa16.63■□□□□ 0.25
USP42-201ENST00000306177 ODC1P11926 461 aa16.63■□□□□ 0.25
USP42-201ENST00000306177 ACTN3Q08043 901 aaPredicted RBP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms