RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 ALAS1P13196 640 aa13.67□□□□□ -0.22
TRIM35-201ENST00000305364 AQP5P55064 265 aa13.67□□□□□ -0.22
TRIM35-201ENST00000305364 R3HDM1Q15032 1099 aaKnown RBP13.67□□□□□ -0.22
TRIM35-201ENST00000305364 ATP13A4Q4VNC1 1196 aa13.67□□□□□ -0.22
TRIM35-201ENST00000305364 CGB2Q6NT52 195 aa13.67□□□□□ -0.22
TRIM35-201ENST00000305364 KCTD6Q8NC69 237 aa13.67□□□□□ -0.22
TRIM35-201ENST00000305364 SENP7Q9BQF6 1050 aa13.67□□□□□ -0.22
TRIM35-201ENST00000305364 TAS2R1Q9NYW7 299 aa13.67□□□□□ -0.22
TRIM35-201ENST00000305364 CAMTA1Q9Y6Y1 1673 aa13.67□□□□□ -0.22
TRIM35-201ENST00000305364 SIPA1L3O60292 1781 aaPredicted RBP13.67□□□□□ -0.22
TRIM35-201ENST00000305364 TESPA1A2RU30 521 aaPredicted RBP13.67□□□□□ -0.22
TRIM35-201ENST00000305364 CCNG1P51959 295 aa13.67□□□□□ -0.22
TRIM35-201ENST00000305364 PDE1CQ14123 709 aaPredicted RBP13.67□□□□□ -0.22
TRIM35-201ENST00000305364 GSTA3Q16772 222 aa13.67□□□□□ -0.22
TRIM35-201ENST00000305364 RIPOR1Q6ZS17 1223 aa13.67□□□□□ -0.22
TRIM35-201ENST00000305364 FAM71AQ8IYT1 594 aa13.67□□□□□ -0.22
TRIM35-201ENST00000305364 TRIML2Q8N7C3 387 aa13.67□□□□□ -0.22
TRIM35-201ENST00000305364 C12orf50Q8NA57 414 aaPredicted RBP13.67□□□□□ -0.22
TRIM35-201ENST00000305364 CLPTM1LQ96KA5 538 aa13.67□□□□□ -0.22
TRIM35-201ENST00000305364 FAM210AQ96ND0 272 aa13.67□□□□□ -0.22
TRIM35-201ENST00000305364 TRIM56Q9BRZ2 755 aaKnown RBP13.67□□□□□ -0.22
TRIM35-201ENST00000305364 KIFC3Q9BVG8 833 aa13.67□□□□□ -0.22
TRIM35-201ENST00000305364 PARVAQ9NVD7 372 aa13.67□□□□□ -0.22
TRIM35-201ENST00000305364 NARFQ9UHQ1 456 aa13.67□□□□□ -0.22
TRIM35-201ENST00000305364 TJP1Q07157 1748 aa13.67□□□□□ -0.22
TRIM35-201ENST00000305364 PKD1L3Q7Z443 1732 aa13.67□□□□□ -0.22
TRIM35-201ENST00000305364 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.67□□□□□ -0.22
TRIM35-201ENST00000305364 MEI4A8MW99 385 aa13.67□□□□□ -0.22
TRIM35-201ENST00000305364 TRIM49D1C9J1S8 452 aa13.67□□□□□ -0.22
TRIM35-201ENST00000305364 MEIS2O14770 477 aa13.67□□□□□ -0.22
TRIM35-201ENST00000305364 PRPF4O43172 522 aaKnown RBP eCLIP13.67□□□□□ -0.22
TRIM35-201ENST00000305364 PSTPIP1O43586 416 aa13.67□□□□□ -0.22
TRIM35-201ENST00000305364 PGM3O95394 542 aa13.67□□□□□ -0.22
TRIM35-201ENST00000305364 ABHD2P08910 425 aa13.67□□□□□ -0.22
TRIM35-201ENST00000305364 YY1P25490 414 aa13.67□□□□□ -0.22
TRIM35-201ENST00000305364 PSMA2P25787 234 aa13.67□□□□□ -0.22
TRIM35-201ENST00000305364 HADHBP55084 474 aaKnown RBP13.67□□□□□ -0.22
TRIM35-201ENST00000305364 TRPC3Q13507 836 aa13.67□□□□□ -0.22
TRIM35-201ENST00000305364 ACBD5Q5T8D3 534 aaPredicted RBP13.67□□□□□ -0.22
TRIM35-201ENST00000305364 RINLQ6ZS11 566 aa13.67□□□□□ -0.22
TRIM35-201ENST00000305364 MARK2Q7KZI7 788 aaKnown RBP13.67□□□□□ -0.22
TRIM35-201ENST00000305364 ENDOVQ8N8Q3 282 aaKnown RBP13.67□□□□□ -0.22
TRIM35-201ENST00000305364 ZNF398Q8TD17 642 aa13.67□□□□□ -0.22
TRIM35-201ENST00000305364 ECSITQ9BQ95 431 aa13.67□□□□□ -0.22
TRIM35-201ENST00000305364 C10orf88Q9H8K7 445 aa13.67□□□□□ -0.22
TRIM35-201ENST00000305364 TMEM8AQ9HCN3 771 aa13.67□□□□□ -0.22
TRIM35-201ENST00000305364 GPRC5CQ9NQ84 441 aa13.67□□□□□ -0.22
TRIM35-201ENST00000305364 IL1RAPL1Q9NZN1 696 aa13.67□□□□□ -0.22
TRIM35-201ENST00000305364 A0A1B0GVG6 124 aa13.66□□□□□ -0.22
TRIM35-201ENST00000305364 GH2P01242 217 aa13.66□□□□□ -0.22
TRIM35-201ENST00000305364 PDE1BQ01064 536 aa13.66□□□□□ -0.22
TRIM35-201ENST00000305364 CNGA3Q16281 694 aa13.66□□□□□ -0.22
TRIM35-201ENST00000305364 SMTNL2Q2TAL5 461 aa13.66□□□□□ -0.22
TRIM35-201ENST00000305364 LCA5Q86VQ0 697 aa13.66□□□□□ -0.22
TRIM35-201ENST00000305364 WDR60Q8WVS4 1066 aa13.66□□□□□ -0.22
TRIM35-201ENST00000305364 MCEEQ96PE7 176 aa13.66□□□□□ -0.22
TRIM35-201ENST00000305364 NUP188Q5SRE5 1749 aa13.66□□□□□ -0.22
TRIM35-201ENST00000305364 DKC1O60832 514 aaKnown RBP eCLIP13.66□□□□□ -0.22
TRIM35-201ENST00000305364 DNAJC6O75061 913 aa13.66□□□□□ -0.22
TRIM35-201ENST00000305364 NDUFB10O96000 172 aa13.66□□□□□ -0.22
TRIM35-201ENST00000305364 P4HBP07237 508 aaKnown RBP13.66□□□□□ -0.22
TRIM35-201ENST00000305364 WEE2P0C1S8 567 aa13.66□□□□□ -0.22
TRIM35-201ENST00000305364 EFTUD2Q15029 972 aaKnown RBP eCLIP13.66□□□□□ -0.22
TRIM35-201ENST00000305364 TTC7BQ86TV6 843 aa13.66□□□□□ -0.22
TRIM35-201ENST00000305364 ALYREFQ86V81 257 aaKnown RBP13.66□□□□□ -0.22
TRIM35-201ENST00000305364 ZC3H3Q8IXZ2 948 aaKnown RBP13.66□□□□□ -0.22
TRIM35-201ENST00000305364 EXD1Q8NHP7 514 aa13.66□□□□□ -0.22
TRIM35-201ENST00000305364 CHURC1Q8WUH1 139 aa13.66□□□□□ -0.22
TRIM35-201ENST00000305364 HSPH1Q92598 858 aa13.66□□□□□ -0.22
TRIM35-201ENST00000305364 NR1H4Q96RI1 486 aaPredicted RBP13.66□□□□□ -0.22
TRIM35-201ENST00000305364 GALNT8Q9NY28 637 aa13.66□□□□□ -0.22
TRIM35-201ENST00000305364 THEGQ9P2T0 379 aa13.66□□□□□ -0.22
TRIM35-201ENST00000305364 PI4KBQ9UBF8 816 aa13.66□□□□□ -0.22
TRIM35-201ENST00000305364 AMPD1P23109 780 aa13.66□□□□□ -0.22
TRIM35-201ENST00000305364 SMAD1Q15797 465 aaKnown RBP13.66□□□□□ -0.22
TRIM35-201ENST00000305364 LIN52Q52LA3 116 aa13.66□□□□□ -0.22
TRIM35-201ENST00000305364 SCYL2Q6P3W7 929 aa13.66□□□□□ -0.22
TRIM35-201ENST00000305364 MFSD7Q6UXD7 560 aa13.66□□□□□ -0.22
TRIM35-201ENST00000305364 PPIL6Q8IXY8 311 aa13.66□□□□□ -0.22
TRIM35-201ENST00000305364 ZFAND2BQ8WV99 257 aa13.66□□□□□ -0.22
TRIM35-201ENST00000305364 VPS11Q9H270 941 aa13.66□□□□□ -0.22
TRIM35-201ENST00000305364 KCND2Q9NZV8 630 aa13.66□□□□□ -0.22
TRIM35-201ENST00000305364 TAGLN3Q9UI15 199 aa13.66□□□□□ -0.22
TRIM35-201ENST00000305364 ATF5Q9Y2D1 282 aaPredicted RBP13.66□□□□□ -0.22
TRIM35-201ENST00000305364 WDR64B1ANS9 1081 aa13.66□□□□□ -0.22
TRIM35-201ENST00000305364 ADCY3O60266 1144 aa13.66□□□□□ -0.22
TRIM35-201ENST00000305364 KRT38O76015 456 aa13.66□□□□□ -0.22
TRIM35-201ENST00000305364 NEK3P51956 506 aa13.66□□□□□ -0.22
TRIM35-201ENST00000305364 STX3Q13277 289 aa13.66□□□□□ -0.22
TRIM35-201ENST00000305364 ENOSF1Q7L5Y1 443 aa13.66□□□□□ -0.22
TRIM35-201ENST00000305364 C7orf43Q8WVR3 580 aa13.66□□□□□ -0.22
TRIM35-201ENST00000305364 CEP170P1Q96L14 293 aa13.66□□□□□ -0.22
TRIM35-201ENST00000305364 KREMEN1Q96MU8 473 aa13.66□□□□□ -0.22
TRIM35-201ENST00000305364 NMUR2Q9GZQ4 415 aa13.66□□□□□ -0.22
TRIM35-201ENST00000305364 SUDS3Q9H7L9 328 aaPredicted RBP13.66□□□□□ -0.22
TRIM35-201ENST00000305364 SLC9A2Q9UBY0 812 aa13.66□□□□□ -0.22
TRIM35-201ENST00000305364 MARF1Q9Y4F3 1742 aaKnown RBP13.66□□□□□ -0.22
TRIM35-201ENST00000305364 CST8O60676 142 aa13.65□□□□□ -0.22
TRIM35-201ENST00000305364 BAG6P46379 1132 aa13.65□□□□□ -0.22
TRIM35-201ENST00000305364 CLK2P49760 499 aaKnown RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms