RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 PSMG2Q969U7 264 aa28.4■■■□□ 2.14
CDKN2A-201ENST00000304494 GPR88Q9GZN0 384 aa28.4■■■□□ 2.14
CDKN2A-201ENST00000304494 PCDHB5Q9Y5E4 795 aa28.4■■■□□ 2.14
CDKN2A-201ENST00000304494 GOLGA6L4A6NEF3 574 aa28.39■■■□□ 2.14
CDKN2A-201ENST00000304494 PDXKO00764 312 aa28.39■■■□□ 2.14
CDKN2A-201ENST00000304494 RHOBTB3O94955 611 aa28.39■■■□□ 2.14
CDKN2A-201ENST00000304494 GPC5P78333 572 aa28.39■■■□□ 2.14
CDKN2A-201ENST00000304494 DPYDQ12882 1025 aa28.39■■■□□ 2.14
CDKN2A-201ENST00000304494 NFE2Q16621 373 aaPredicted RBP28.39■■■□□ 2.14
CDKN2A-201ENST00000304494 SLC9A9Q8IVB4 645 aa28.39■■■□□ 2.14
CDKN2A-201ENST00000304494 ELSPBP1Q96BH3 223 aa28.39■■■□□ 2.14
CDKN2A-201ENST00000304494 KCTD10Q9H3F6 313 aa28.39■■■□□ 2.14
CDKN2A-201ENST00000304494 ABI2Q9NYB9 513 aaPredicted RBP28.39■■■□□ 2.14
CDKN2A-201ENST00000304494 CA14Q9ULX7 337 aa28.39■■■□□ 2.14
CDKN2A-201ENST00000304494 SOAT2O75908 522 aa28.38■■■□□ 2.13
CDKN2A-201ENST00000304494 PRR29P0C7W0 189 aa28.38■■■□□ 2.13
CDKN2A-201ENST00000304494 NPR3P17342 541 aa28.38■■■□□ 2.13
CDKN2A-201ENST00000304494 RFX1P22670 979 aa28.38■■■□□ 2.13
CDKN2A-201ENST00000304494 PCSK1P29120 753 aa28.38■■■□□ 2.13
CDKN2A-201ENST00000304494 PTPN5P54829 565 aa28.38■■■□□ 2.13
CDKN2A-201ENST00000304494 PFKPQ01813 784 aa28.38■■■□□ 2.13
CDKN2A-201ENST00000304494 SOWAHAQ2M3V2 549 aa28.38■■■□□ 2.13
CDKN2A-201ENST00000304494 CWF19L1Q69YN2 538 aaKnown RBP28.38■■■□□ 2.13
CDKN2A-201ENST00000304494 DNAJB7Q7Z6W7 309 aaPredicted RBP28.38■■■□□ 2.13
CDKN2A-201ENST00000304494 TMC8Q8IU68 726 aa28.38■■■□□ 2.13
CDKN2A-201ENST00000304494 TMEM105Q8N8V8 129 aa28.38■■■□□ 2.13
CDKN2A-201ENST00000304494 PRSS33Q8NF86 280 aa28.38■■■□□ 2.13
CDKN2A-201ENST00000304494 FAM200AQ8TCP9 573 aa28.38■■■□□ 2.13
CDKN2A-201ENST00000304494 LRRC3Q9BY71 257 aa28.38■■■□□ 2.13
CDKN2A-201ENST00000304494 ZFP14Q9HCL3 533 aa28.38■■■□□ 2.13
CDKN2A-201ENST00000304494 ARHGEF3Q9NR81 526 aa28.38■■■□□ 2.13
CDKN2A-201ENST00000304494 DMAC2Q9NW81 257 aa28.38■■■□□ 2.13
CDKN2A-201ENST00000304494 KRBA1A5PL33 1030 aa28.37■■■□□ 2.13
CDKN2A-201ENST00000304494 STK25O00506 426 aa28.37■■■□□ 2.13
CDKN2A-201ENST00000304494 GABRDO14764 452 aa28.37■■■□□ 2.13
CDKN2A-201ENST00000304494 MOSPD3O75425 235 aa28.37■■■□□ 2.13
CDKN2A-201ENST00000304494 HAPLN1P10915 354 aaPredicted RBP28.37■■■□□ 2.13
CDKN2A-201ENST00000304494 AOC1P19801 751 aa28.37■■■□□ 2.13
CDKN2A-201ENST00000304494 INTS6LQ5JSJ4 861 aaKnown RBP28.37■■■□□ 2.13
CDKN2A-201ENST00000304494 FAM78AQ5JUQ0 283 aa28.37■■■□□ 2.13
CDKN2A-201ENST00000304494 SHKBP1Q8TBC3 707 aa28.37■■■□□ 2.13
CDKN2A-201ENST00000304494 ASB16Q96NS5 453 aa28.37■■■□□ 2.13
CDKN2A-201ENST00000304494 CALUO43852 315 aaPredicted RBP28.36■■■□□ 2.13
CDKN2A-201ENST00000304494 AP3M2P53677 418 aa28.36■■■□□ 2.13
CDKN2A-201ENST00000304494 KCNB1Q14721 858 aa28.36■■■□□ 2.13
CDKN2A-201ENST00000304494 TEAD2Q15562 447 aa28.36■■■□□ 2.13
CDKN2A-201ENST00000304494 POTEHQ6S545 545 aa28.36■■■□□ 2.13
CDKN2A-201ENST00000304494 SMARCD2Q92925 531 aa28.36■■■□□ 2.13
CDKN2A-201ENST00000304494 SLITRK6Q9H5Y7 841 aa28.36■■■□□ 2.13
CDKN2A-201ENST00000304494 ZDBF2Q9HCK1 2354 aa28.35■■■□□ 2.13
CDKN2A-201ENST00000304494 A0A1W2PRU2 124 aa28.35■■■□□ 2.13
CDKN2A-201ENST00000304494 NR3C1P04150 777 aa28.35■■■□□ 2.13
CDKN2A-201ENST00000304494 GJA1P17302 382 aa28.35■■■□□ 2.13
CDKN2A-201ENST00000304494 ATF6P18850 670 aa28.35■■■□□ 2.13
CDKN2A-201ENST00000304494 ACAT1P24752 427 aaKnown RBP28.35■■■□□ 2.13
CDKN2A-201ENST00000304494 TAF12Q16514 161 aa28.35■■■□□ 2.13
CDKN2A-201ENST00000304494 TANGO2Q6ICL3 276 aa28.35■■■□□ 2.13
CDKN2A-201ENST00000304494 LIMS2Q7Z4I7 341 aa28.35■■■□□ 2.13
CDKN2A-201ENST00000304494 SHDQ96IW2 340 aa28.35■■■□□ 2.13
CDKN2A-201ENST00000304494 LPIN3Q9BQK8 851 aa28.35■■■□□ 2.13
CDKN2A-201ENST00000304494 IRF2BPLQ9H1B7 796 aa28.35■■■□□ 2.13
CDKN2A-201ENST00000304494 ABCB6Q9NP58 842 aa28.35■■■□□ 2.13
CDKN2A-201ENST00000304494 TMLHEQ9NVH6 421 aa28.35■■■□□ 2.13
CDKN2A-201ENST00000304494 NRG2O14511 850 aaPredicted RBP28.34■■■□□ 2.13
CDKN2A-201ENST00000304494 CST3P01034 146 aaPredicted RBP28.34■■■□□ 2.13
CDKN2A-201ENST00000304494 FCARP24071 287 aa28.34■■■□□ 2.13
CDKN2A-201ENST00000304494 CDR1P51861 262 aa28.34■■■□□ 2.13
CDKN2A-201ENST00000304494 NHLH1Q02575 133 aa28.34■■■□□ 2.13
CDKN2A-201ENST00000304494 TRPC3Q13507 836 aa28.34■■■□□ 2.13
CDKN2A-201ENST00000304494 PHLDB3Q6NSJ2 640 aa28.34■■■□□ 2.13
CDKN2A-201ENST00000304494 ZSCAN18Q8TBC5 510 aaPredicted RBP28.34■■■□□ 2.13
CDKN2A-201ENST00000304494 ZSWIM3Q96MP5 696 aa28.34■■■□□ 2.13
CDKN2A-201ENST00000304494 MMS19Q96T76 1030 aa28.34■■■□□ 2.13
CDKN2A-201ENST00000304494 GZF1Q9H116 711 aaPredicted RBP28.34■■■□□ 2.13
CDKN2A-201ENST00000304494 TBC1D17Q9HA65 648 aa28.34■■■□□ 2.13
CDKN2A-201ENST00000304494 TRPV4Q9HBA0 871 aa28.34■■■□□ 2.13
CDKN2A-201ENST00000304494 TRAF3IP3Q9Y228 551 aa28.34■■■□□ 2.13
CDKN2A-201ENST00000304494 GALR2O43603 387 aaPredicted RBP28.33■■■□□ 2.13
CDKN2A-201ENST00000304494 PHACTR2O75167 634 aa28.33■■■□□ 2.13
CDKN2A-201ENST00000304494 STAU1O95793 577 aaKnown RBP28.33■■■□□ 2.13
CDKN2A-201ENST00000304494 ATICP31939 592 aa28.33■■■□□ 2.13
CDKN2A-201ENST00000304494 TNNC1P63316 161 aa28.33■■■□□ 2.13
CDKN2A-201ENST00000304494 ARHGAP15Q53QZ3 475 aa28.33■■■□□ 2.13
CDKN2A-201ENST00000304494 OSTM1Q86WC4 334 aa28.33■■■□□ 2.13
CDKN2A-201ENST00000304494 FMR1NBQ8N0W7 255 aaPredicted RBP28.33■■■□□ 2.13
CDKN2A-201ENST00000304494 PARD3BQ8TEW8 1205 aa28.33■■■□□ 2.13
CDKN2A-201ENST00000304494 ZNF516Q92618 1163 aa28.33■■■□□ 2.13
CDKN2A-201ENST00000304494 GCNAQ96QF7 691 aa28.33■■■□□ 2.13
CDKN2A-201ENST00000304494 PKMYT1Q99640 499 aa28.33■■■□□ 2.13
CDKN2A-201ENST00000304494 PI4K2AQ9BTU6 479 aa28.33■■■□□ 2.13
CDKN2A-201ENST00000304494 PLA2G2FQ9BZM2 168 aa28.33■■■□□ 2.13
CDKN2A-201ENST00000304494 ZNF334Q9HCZ1 680 aaPredicted RBP28.33■■■□□ 2.13
CDKN2A-201ENST00000304494 GTF3C4Q9UKN8 822 aa28.33■■■□□ 2.13
CDKN2A-201ENST00000304494 FRMD4BQ9Y2L6 1034 aa28.33■■■□□ 2.13
CDKN2A-201ENST00000304494 WARSP23381 471 aaKnown RBP28.32■■■□□ 2.12
CDKN2A-201ENST00000304494 GABRR2P28476 465 aa28.32■■■□□ 2.12
CDKN2A-201ENST00000304494 CDC25CP30307 473 aa28.32■■■□□ 2.12
CDKN2A-201ENST00000304494 CLDN10P78369 228 aa28.32■■■□□ 2.12
CDKN2A-201ENST00000304494 TCF15Q12870 199 aa28.32■■■□□ 2.12
CDKN2A-201ENST00000304494 KBTBD7Q8WVZ9 684 aa28.32■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms