RNA–Protein interactions for RNA: ENST00000303731.8

TRAPPC1-201, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC1, Length 811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-201ENST00000303731 ASIC1P78348 528 aa17.94■□□□□ 0.46
TRAPPC1-201ENST00000303731 RBP5P82980 135 aa17.94■□□□□ 0.46
TRAPPC1-201ENST00000303731 MYL7Q01449 175 aa17.94■□□□□ 0.46
TRAPPC1-201ENST00000303731 CSGALNACT2Q8N6G5 542 aa17.94■□□□□ 0.46
TRAPPC1-201ENST00000303731 LEO1Q8WVC0 666 aaPredicted RBP17.94■□□□□ 0.46
TRAPPC1-201ENST00000303731 DHX58Q96C10 678 aa17.94■□□□□ 0.46
TRAPPC1-201ENST00000303731 ANKRD36BP1Q96IX9 119 aa17.94■□□□□ 0.46
TRAPPC1-201ENST00000303731 ACBD6Q9BR61 282 aa17.94■□□□□ 0.46
TRAPPC1-201ENST00000303731 ATXN3LQ9H3M9 355 aa17.94■□□□□ 0.46
TRAPPC1-201ENST00000303731 SPATA6Q9NWH7 488 aaPredicted RBP17.94■□□□□ 0.46
TRAPPC1-201ENST00000303731 GDAP2Q9NXN4 497 aa17.94■□□□□ 0.46
TRAPPC1-201ENST00000303731 FAM13BQ9NYF5 915 aa17.94■□□□□ 0.46
TRAPPC1-201ENST00000303731 CFAP45Q9UL16 551 aa17.94■□□□□ 0.46
TRAPPC1-201ENST00000303731 PCDHB5Q9Y5E4 795 aa17.94■□□□□ 0.46
TRAPPC1-201ENST00000303731 COL4A2P08572 1712 aa17.94■□□□□ 0.46
TRAPPC1-201ENST00000303731 TICRRQ7Z2Z1 1910 aa17.94■□□□□ 0.46
TRAPPC1-201ENST00000303731 DPYSL4O14531 572 aa17.93■□□□□ 0.46
TRAPPC1-201ENST00000303731 CHADO15335 359 aa17.93■□□□□ 0.46
TRAPPC1-201ENST00000303731 F13A1P00488 732 aa17.93■□□□□ 0.46
TRAPPC1-201ENST00000303731 LMNAP02545 664 aaKnown RBP17.93■□□□□ 0.46
TRAPPC1-201ENST00000303731 HAPLN1P10915 354 aaPredicted RBP17.93■□□□□ 0.46
TRAPPC1-201ENST00000303731 TARSP26639 723 aaKnown RBP17.93■□□□□ 0.46
TRAPPC1-201ENST00000303731 VIPR2P41587 438 aa17.93■□□□□ 0.46
TRAPPC1-201ENST00000303731 LHX1P48742 406 aa17.93■□□□□ 0.46
TRAPPC1-201ENST00000303731 FCHO2Q0JRZ9 810 aa17.93■□□□□ 0.46
TRAPPC1-201ENST00000303731 MYO1EQ12965 1108 aa17.93■□□□□ 0.46
TRAPPC1-201ENST00000303731 FAM26FQ5R3K3 315 aa17.93■□□□□ 0.46
TRAPPC1-201ENST00000303731 SHC4Q6S5L8 630 aa17.93■□□□□ 0.46
TRAPPC1-201ENST00000303731 GAREM2Q75VX8 874 aa17.93■□□□□ 0.46
TRAPPC1-201ENST00000303731 DPH6Q7L8W6 267 aa17.93■□□□□ 0.46
TRAPPC1-201ENST00000303731 TTC9BQ8N6N2 239 aa17.93■□□□□ 0.46
TRAPPC1-201ENST00000303731 TOP6BLQ8N6T0 577 aa17.93■□□□□ 0.46
TRAPPC1-201ENST00000303731 ZNF507Q8TCN5 953 aa17.93■□□□□ 0.46
TRAPPC1-201ENST00000303731 CSGALNACT1Q8TDX6 532 aa17.93■□□□□ 0.46
TRAPPC1-201ENST00000303731 NOC3LQ8WTT2 800 aaKnown RBP17.93■□□□□ 0.46
TRAPPC1-201ENST00000303731 C7orf25Q9BPX7 421 aa17.93■□□□□ 0.46
TRAPPC1-201ENST00000303731 FGFBP2Q9BYJ0 223 aa17.93■□□□□ 0.46
TRAPPC1-201ENST00000303731 PCIF1Q9H4Z3 704 aa17.93■□□□□ 0.46
TRAPPC1-201ENST00000303731 PDE11AQ9HCR9 933 aa17.93■□□□□ 0.46
TRAPPC1-201ENST00000303731 ABCB6Q9NP58 842 aa17.93■□□□□ 0.46
TRAPPC1-201ENST00000303731 MTF2Q9Y483 593 aaPredicted RBP17.93■□□□□ 0.46
TRAPPC1-201ENST00000303731 EP300Q09472 2414 aaPredicted RBP17.92■□□□□ 0.46
TRAPPC1-201ENST00000303731 GOLGA8IPA6NC78 632 aa17.92■□□□□ 0.46
TRAPPC1-201ENST00000303731 GOLGA8JA6NMD2 632 aa17.92■□□□□ 0.46
TRAPPC1-201ENST00000303731 SOBPA7XYQ1 873 aa17.92■□□□□ 0.46
TRAPPC1-201ENST00000303731 TULP1O00294 542 aaPredicted RBP17.92■□□□□ 0.46
TRAPPC1-201ENST00000303731 NRG2O14511 850 aaPredicted RBP17.92■□□□□ 0.46
TRAPPC1-201ENST00000303731 LRRN2O75325 713 aa17.92■□□□□ 0.46
TRAPPC1-201ENST00000303731 TNNC2P02585 160 aa17.92■□□□□ 0.46
TRAPPC1-201ENST00000303731 KRT19P08727 400 aa17.92■□□□□ 0.46
TRAPPC1-201ENST00000303731 ATF6P18850 670 aa17.92■□□□□ 0.46
TRAPPC1-201ENST00000303731 CD72P21854 359 aa17.92■□□□□ 0.46
TRAPPC1-201ENST00000303731 DDX6P26196 483 aaKnown RBP eCLIP17.92■□□□□ 0.46
TRAPPC1-201ENST00000303731 GPR158Q5T848 1215 aa17.92■□□□□ 0.46
TRAPPC1-201ENST00000303731 EPM2AIP1Q7L775 607 aaPredicted RBP17.92■□□□□ 0.46
TRAPPC1-201ENST00000303731 ARID3BQ8IVW6 561 aaPredicted RBP17.92■□□□□ 0.46
TRAPPC1-201ENST00000303731 PDCL2Q8N4E4 241 aa17.92■□□□□ 0.46
TRAPPC1-201ENST00000303731 ZSWIM2Q8NEG5 633 aa17.92■□□□□ 0.46
TRAPPC1-201ENST00000303731 MTMR12Q9C0I1 747 aa17.92■□□□□ 0.46
TRAPPC1-201ENST00000303731 TASP1Q9H6P5 420 aa17.92■□□□□ 0.46
TRAPPC1-201ENST00000303731 INTS13Q9NVM9 706 aa17.92■□□□□ 0.46
TRAPPC1-201ENST00000303731 DDX43Q9NXZ2 648 aaKnown RBP17.92■□□□□ 0.46
TRAPPC1-201ENST00000303731 ABI2Q9NYB9 513 aaPredicted RBP17.92■□□□□ 0.46
TRAPPC1-201ENST00000303731 CGNQ9P2M7 1197 aaKnown RBP17.92■□□□□ 0.46
TRAPPC1-201ENST00000303731 PIAS3Q9Y6X2 628 aa17.92■□□□□ 0.46
TRAPPC1-201ENST00000303731 SPTBN4Q9H254 2564 aa17.92■□□□□ 0.46
TRAPPC1-201ENST00000303731 COL4A3Q01955 1670 aa17.91■□□□□ 0.46
TRAPPC1-201ENST00000303731 ZNF292O60281 2723 aa17.91■□□□□ 0.46
TRAPPC1-201ENST00000303731 ARNTLO00327 626 aa17.91■□□□□ 0.46
TRAPPC1-201ENST00000303731 PRPF40AO75400 957 aaKnown RBP17.91■□□□□ 0.46
TRAPPC1-201ENST00000303731 SOAT2O75908 522 aa17.91■□□□□ 0.46
TRAPPC1-201ENST00000303731 PCSK1P29120 753 aa17.91■□□□□ 0.46
TRAPPC1-201ENST00000303731 ME1P48163 572 aa17.91■□□□□ 0.46
TRAPPC1-201ENST00000303731 WNT7BP56706 349 aa17.91■□□□□ 0.46
TRAPPC1-201ENST00000303731 PLCB2Q00722 1185 aa17.91■□□□□ 0.46
TRAPPC1-201ENST00000303731 BFSP1Q12934 665 aa17.91■□□□□ 0.46
TRAPPC1-201ENST00000303731 PPP2R5DQ14738 602 aa17.91■□□□□ 0.46
TRAPPC1-201ENST00000303731 DUOXA2Q1HG44 320 aa17.91■□□□□ 0.46
TRAPPC1-201ENST00000303731 ARHGAP29Q52LW3 1261 aa17.91■□□□□ 0.46
TRAPPC1-201ENST00000303731 MAMSTRQ6ZN01 415 aa17.91■□□□□ 0.46
TRAPPC1-201ENST00000303731 UNC13DQ70J99 1090 aa17.91■□□□□ 0.46
TRAPPC1-201ENST00000303731 HS2ST1Q7LGA3 356 aa17.91■□□□□ 0.46
TRAPPC1-201ENST00000303731 LRRTM3Q86VH5 581 aa17.91■□□□□ 0.46
TRAPPC1-201ENST00000303731 WDR49Q8IV35 697 aa17.91■□□□□ 0.46
TRAPPC1-201ENST00000303731 ADSSL1Q8N142 457 aa17.91■□□□□ 0.46
TRAPPC1-201ENST00000303731 CXorf38Q8TB03 319 aa17.91■□□□□ 0.46
TRAPPC1-201ENST00000303731 FAM3CQ92520 227 aa17.91■□□□□ 0.46
TRAPPC1-201ENST00000303731 LPIN3Q9BQK8 851 aa17.91■□□□□ 0.46
TRAPPC1-201ENST00000303731 FAM126AQ9BYI3 521 aaPredicted RBP17.91■□□□□ 0.46
TRAPPC1-201ENST00000303731 C8orf33Q9H7E9 229 aaPredicted RBP17.91■□□□□ 0.46
TRAPPC1-201ENST00000303731 HSPBP1Q9NZL4 362 aa17.91■□□□□ 0.46
TRAPPC1-201ENST00000303731 L1RE1Q9UN81 338 aa17.91■□□□□ 0.46
TRAPPC1-201ENST00000303731 SNX9Q9Y5X1 595 aa17.91■□□□□ 0.46
TRAPPC1-201ENST00000303731 DENND4CQ5VZ89 1909 aa17.9■□□□□ 0.46
TRAPPC1-201ENST00000303731 PVALEFA0A1B0GWK0 134 aa17.9■□□□□ 0.46
TRAPPC1-201ENST00000303731 POLR2DO15514 142 aaKnown RBP17.9■□□□□ 0.46
TRAPPC1-201ENST00000303731 KINO60870 393 aaKnown RBP17.9■□□□□ 0.46
TRAPPC1-201ENST00000303731 CSH1P0DML2 217 aa17.9■□□□□ 0.46
TRAPPC1-201ENST00000303731 CSH2P0DML3 217 aa17.9■□□□□ 0.46
TRAPPC1-201ENST00000303731 RPL10AP62906 217 aaKnown RBP17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms