RNA–Protein interactions for RNA: ENST00000303553.5

NDUFA3-201, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 2 BASIC

Gene NDUFA3, Length 379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-201ENST00000303553 MAPRE1Q15691 268 aaKnown RBP18.12■□□□□ 0.49
NDUFA3-201ENST00000303553 KLHL10Q6JEL2 608 aa18.12■□□□□ 0.49
NDUFA3-201ENST00000303553 SV2AQ7L0J3 742 aa18.12■□□□□ 0.49
NDUFA3-201ENST00000303553 GET4Q7L5D6 327 aaPredicted RBP18.12■□□□□ 0.49
NDUFA3-201ENST00000303553 LIMS2Q7Z4I7 341 aa18.12■□□□□ 0.49
NDUFA3-201ENST00000303553 NELFBQ8WX92 580 aa18.12■□□□□ 0.49
NDUFA3-201ENST00000303553 ZNF512Q96ME7 567 aaPredicted RBP18.12■□□□□ 0.49
NDUFA3-201ENST00000303553 SNX25Q9H3E2 840 aa18.12■□□□□ 0.49
NDUFA3-201ENST00000303553 METTL14Q9HCE5 456 aaKnown RBP18.12■□□□□ 0.49
NDUFA3-201ENST00000303553 TMEM8AQ9HCN3 771 aa18.12■□□□□ 0.49
NDUFA3-201ENST00000303553 AVENQ9NQS1 362 aaPredicted RBP18.12■□□□□ 0.49
NDUFA3-201ENST00000303553 LMBRD1Q9NUN5 540 aa18.12■□□□□ 0.49
NDUFA3-201ENST00000303553 TRIM49BA6NDI0 452 aa18.11■□□□□ 0.49
NDUFA3-201ENST00000303553 DCXO43602 365 aa18.11■□□□□ 0.49
NDUFA3-201ENST00000303553 TRIM49P0CI25 452 aa18.11■□□□□ 0.49
NDUFA3-201ENST00000303553 TRIM49CP0CI26 452 aa18.11■□□□□ 0.49
NDUFA3-201ENST00000303553 BMP6P22004 513 aa18.11■□□□□ 0.49
NDUFA3-201ENST00000303553 PMS1P54277 932 aaKnown RBP18.11■□□□□ 0.49
NDUFA3-201ENST00000303553 MCCD1P59942 119 aaPredicted RBP18.11■□□□□ 0.49
NDUFA3-201ENST00000303553 VEPH1Q14D04 833 aa18.11■□□□□ 0.49
NDUFA3-201ENST00000303553 INTS6LQ5JSJ4 861 aaKnown RBP18.11■□□□□ 0.49
NDUFA3-201ENST00000303553 KRT39Q6A163 491 aa18.11■□□□□ 0.49
NDUFA3-201ENST00000303553 ITIH5Q86UX2 942 aa18.11■□□□□ 0.49
NDUFA3-201ENST00000303553 TMEM209Q96SK2 561 aa18.11■□□□□ 0.49
NDUFA3-201ENST00000303553 XYLT2Q9H1B5 865 aa18.11■□□□□ 0.49
NDUFA3-201ENST00000303553 ABCB6Q9NP58 842 aa18.11■□□□□ 0.49
NDUFA3-201ENST00000303553 NXF1Q9UBU9 619 aaKnown RBP18.11■□□□□ 0.49
NDUFA3-201ENST00000303553 ARMCX3Q9UH62 379 aaPredicted RBP18.11■□□□□ 0.49
NDUFA3-201ENST00000303553 CDH9Q9ULB4 789 aa18.11■□□□□ 0.49
NDUFA3-201ENST00000303553 CTNND2Q9UQB3 1225 aa18.11■□□□□ 0.49
NDUFA3-201ENST00000303553 ASB3Q9Y575 518 aa18.11■□□□□ 0.49
NDUFA3-201ENST00000303553 PCDHB5Q9Y5E4 795 aa18.11■□□□□ 0.49
NDUFA3-201ENST00000303553 PPP1R3GB7ZBB8 358 aa18.1■□□□□ 0.49
NDUFA3-201ENST00000303553 ZNF197O14709 1029 aa18.1■□□□□ 0.49
NDUFA3-201ENST00000303553 FGFR1OPO95684 399 aaKnown RBP18.1■□□□□ 0.49
NDUFA3-201ENST00000303553 CD44P16070 742 aaKnown RBP18.1■□□□□ 0.49
NDUFA3-201ENST00000303553 TRIM21P19474 475 aaKnown RBP18.1■□□□□ 0.49
NDUFA3-201ENST00000303553 GCLMP48507 274 aa18.1■□□□□ 0.49
NDUFA3-201ENST00000303553 MXI1P50539 228 aa18.1■□□□□ 0.49
NDUFA3-201ENST00000303553 MGAT5BQ3V5L5 792 aa18.1■□□□□ 0.49
NDUFA3-201ENST00000303553 CYP4A22Q5TCH4 519 aa18.1■□□□□ 0.49
NDUFA3-201ENST00000303553 SCARA3Q6AZY7 606 aa18.1■□□□□ 0.49
NDUFA3-201ENST00000303553 C4orf50Q6ZRC1 276 aa18.1■□□□□ 0.49
NDUFA3-201ENST00000303553 PDZD4Q76G19 769 aaPredicted RBP18.1■□□□□ 0.49
NDUFA3-201ENST00000303553 ATAD1Q8NBU5 361 aa18.1■□□□□ 0.49
NDUFA3-201ENST00000303553 FEZF2Q8TBJ5 459 aa18.1■□□□□ 0.49
NDUFA3-201ENST00000303553 KBTBD7Q8WVZ9 684 aa18.1■□□□□ 0.49
NDUFA3-201ENST00000303553 EEF2KMTQ96G04 330 aa18.1■□□□□ 0.49
NDUFA3-201ENST00000303553 SEPT5Q99719 369 aaPredicted RBP18.1■□□□□ 0.49
NDUFA3-201ENST00000303553 ASAH2Q9NR71 780 aa18.1■□□□□ 0.49
NDUFA3-201ENST00000303553 ABI2Q9NYB9 513 aaPredicted RBP18.1■□□□□ 0.49
NDUFA3-201ENST00000303553 EPS15L1Q9UBC2 864 aa18.1■□□□□ 0.49
NDUFA3-201ENST00000303553 DNMT3BQ9UBC3 853 aaKnown RBP18.1■□□□□ 0.49
NDUFA3-201ENST00000303553 PI4K2BG5E9Z4 385 aa18.09■□□□□ 0.49
NDUFA3-201ENST00000303553 VNN1O95497 513 aa18.09■□□□□ 0.49
NDUFA3-201ENST00000303553 VNN2O95498 520 aa18.09■□□□□ 0.49
NDUFA3-201ENST00000303553 FGF19O95750 216 aa18.09■□□□□ 0.49
NDUFA3-201ENST00000303553 GNA14O95837 355 aa18.09■□□□□ 0.49
NDUFA3-201ENST00000303553 ASS1P00966 412 aaKnown RBP18.09■□□□□ 0.49
NDUFA3-201ENST00000303553 HLA-DRAP01903 254 aa18.09■□□□□ 0.49
NDUFA3-201ENST00000303553 RHOP08100 348 aa18.09■□□□□ 0.49
NDUFA3-201ENST00000303553 GNL1P36915 607 aaPredicted RBP18.09■□□□□ 0.49
NDUFA3-201ENST00000303553 PTPN21Q16825 1174 aa18.09■□□□□ 0.49
NDUFA3-201ENST00000303553 CCDC40Q4G0X9 1142 aa18.09■□□□□ 0.49
NDUFA3-201ENST00000303553 DCAF17Q5H9S7 520 aaPredicted RBP18.09■□□□□ 0.49
NDUFA3-201ENST00000303553 C1orf220Q5T0J3 134 aa18.09■□□□□ 0.49
NDUFA3-201ENST00000303553 TCERG1LQ5VWI1 586 aa18.09■□□□□ 0.49
NDUFA3-201ENST00000303553 TTI2Q6NXR4 508 aa18.09■□□□□ 0.49
NDUFA3-201ENST00000303553 FILIP1Q7Z7B0 1213 aa18.09■□□□□ 0.49
NDUFA3-201ENST00000303553 OSTM1Q86WC4 334 aa18.09■□□□□ 0.49
NDUFA3-201ENST00000303553 MLKLQ8NB16 471 aa18.09■□□□□ 0.49
NDUFA3-201ENST00000303553 OR6B3Q8NGW1 331 aa18.09■□□□□ 0.49
NDUFA3-201ENST00000303553 FUBP3Q96I24 572 aaKnown RBP eCLIP18.09■□□□□ 0.49
NDUFA3-201ENST00000303553 SYT15Q9BQS2 421 aa18.09■□□□□ 0.49
NDUFA3-201ENST00000303553 CORO1BQ9BR76 489 aa18.09■□□□□ 0.49
NDUFA3-201ENST00000303553 C1QTNF1Q9BXJ1 281 aa18.09■□□□□ 0.49
NDUFA3-201ENST00000303553 DNAI2Q9GZS0 605 aa18.09■□□□□ 0.49
NDUFA3-201ENST00000303553 MMRN2Q9H8L6 949 aa18.09■□□□□ 0.49
NDUFA3-201ENST00000303553 HCFC1R1Q9NWW0 138 aa18.09■□□□□ 0.49
NDUFA3-201ENST00000303553 IGSF9Q9P2J2 1179 aa18.09■□□□□ 0.49
NDUFA3-201ENST00000303553 DACH1Q9UI36 760 aa18.09■□□□□ 0.49
NDUFA3-201ENST00000303553 MUTYHQ9UIF7 546 aa18.09■□□□□ 0.49
NDUFA3-201ENST00000303553 MRPS23Q9Y3D9 190 aaKnown RBP18.09■□□□□ 0.49
NDUFA3-201ENST00000303553 MUC3AQ02505 3323 aa18.09■□□□□ 0.49
NDUFA3-201ENST00000303553 MICAL2O94851 1124 aa18.08■□□□□ 0.48
NDUFA3-201ENST00000303553 MBD3O95983 291 aa18.08■□□□□ 0.48
NDUFA3-201ENST00000303553 ACAT1P24752 427 aaKnown RBP18.08■□□□□ 0.48
NDUFA3-201ENST00000303553 PPP3CAQ08209 521 aa18.08■□□□□ 0.48
NDUFA3-201ENST00000303553 MTMR3Q13615 1198 aa18.08■□□□□ 0.48
NDUFA3-201ENST00000303553 CFAP221Q4G0U5 840 aa18.08■□□□□ 0.48
NDUFA3-201ENST00000303553 FRMD5Q7Z6J6 570 aa18.08■□□□□ 0.48
NDUFA3-201ENST00000303553 LRRTM3Q86VH5 581 aa18.08■□□□□ 0.48
NDUFA3-201ENST00000303553 SPATA2LQ8IUW3 424 aaPredicted RBP18.08■□□□□ 0.48
NDUFA3-201ENST00000303553 FAM200AQ8TCP9 573 aa18.08■□□□□ 0.48
NDUFA3-201ENST00000303553 NXPE3Q969Y0 559 aa18.08■□□□□ 0.48
NDUFA3-201ENST00000303553 CRISPLD1Q9H336 500 aa18.08■□□□□ 0.48
NDUFA3-201ENST00000303553 CDH7Q9ULB5 785 aa18.08■□□□□ 0.48
NDUFA3-201ENST00000303553 SORCS3Q9UPU3 1222 aa18.08■□□□□ 0.48
NDUFA3-201ENST00000303553 SLC27A5Q9Y2P5 690 aa18.08■□□□□ 0.48
NDUFA3-201ENST00000303553 DOCK8Q8NF50 2099 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms