RNA–Protein interactions for RNA: ENST00000302731.4

CLP1-201, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 2 BASIC

Gene CLP1, Length 1,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-201ENST00000302731 RPS6KA5O75582 802 aa11.23□□□□□ -0.61
CLP1-201ENST00000302731 PYGMP11217 842 aa11.23□□□□□ -0.61
CLP1-201ENST00000302731 CCND3P30281 292 aaPredicted RBP11.23□□□□□ -0.61
CLP1-201ENST00000302731 CHRNA3P32297 505 aa11.23□□□□□ -0.61
CLP1-201ENST00000302731 MAP2K2P36507 400 aa11.23□□□□□ -0.61
CLP1-201ENST00000302731 GABRB2P47870 512 aa11.23□□□□□ -0.61
CLP1-201ENST00000302731 NDST1P52848 882 aa11.23□□□□□ -0.61
CLP1-201ENST00000302731 PAK2Q13177 524 aa11.23□□□□□ -0.61
CLP1-201ENST00000302731 ZNF211Q13398 564 aaPredicted RBP11.23□□□□□ -0.61
CLP1-201ENST00000302731 CUL1Q13616 776 aa11.23□□□□□ -0.61
CLP1-201ENST00000302731 DHX34Q14147 1143 aaKnown RBP11.23□□□□□ -0.61
CLP1-201ENST00000302731 PIGHQ14442 188 aaPredicted RBP11.23□□□□□ -0.61
CLP1-201ENST00000302731 ZNF268Q14587 947 aaPredicted RBP11.23□□□□□ -0.61
CLP1-201ENST00000302731 CASP8Q14790 479 aa11.23□□□□□ -0.61
CLP1-201ENST00000302731 KCNA10Q16322 511 aa11.23□□□□□ -0.61
CLP1-201ENST00000302731 CYP1B1Q16678 543 aa11.23□□□□□ -0.61
CLP1-201ENST00000302731 PTPN20Q4JDL3 420 aa11.23□□□□□ -0.61
CLP1-201ENST00000302731 TWF2Q6IBS0 349 aaKnown RBP11.23□□□□□ -0.61
CLP1-201ENST00000302731 DENND1BQ6P3S1 775 aa11.23□□□□□ -0.61
CLP1-201ENST00000302731 LCLAT1Q6UWP7 414 aa11.23□□□□□ -0.61
CLP1-201ENST00000302731 SLC13A5Q86YT5 568 aaPredicted RBP11.23□□□□□ -0.61
CLP1-201ENST00000302731 RHOT1Q8IXI2 618 aa11.23□□□□□ -0.61
CLP1-201ENST00000302731 KLHL7Q8IXQ5 586 aa11.23□□□□□ -0.61
CLP1-201ENST00000302731 SEC14L1Q92503 715 aa11.23□□□□□ -0.61
CLP1-201ENST00000302731 CAVIN3Q969G5 261 aa11.23□□□□□ -0.61
CLP1-201ENST00000302731 C18orf8Q96DM3 657 aa11.23□□□□□ -0.61
CLP1-201ENST00000302731 TRAIPQ9BWF2 469 aa11.23□□□□□ -0.61
CLP1-201ENST00000302731 UBXN6Q9BZV1 441 aa11.23□□□□□ -0.61
CLP1-201ENST00000302731 TRIM7Q9C029 511 aa11.23□□□□□ -0.61
CLP1-201ENST00000302731 ACBD3Q9H3P7 528 aa11.23□□□□□ -0.61
CLP1-201ENST00000302731 EPB41L5Q9HCM4 733 aa11.23□□□□□ -0.61
CLP1-201ENST00000302731 TUBGCP4Q9UGJ1 667 aa11.23□□□□□ -0.61
CLP1-201ENST00000302731 PARP2Q9UGN5 583 aa11.23□□□□□ -0.61
CLP1-201ENST00000302731 DDX20Q9UHI6 824 aaKnown RBP11.23□□□□□ -0.61
CLP1-201ENST00000302731 TRIP11Q15643 1979 aa11.22□□□□□ -0.61
CLP1-201ENST00000302731 A0A0U1RQG5 324 aaPredicted RBP11.22□□□□□ -0.61
CLP1-201ENST00000302731 FAM187AA6NFU0 413 aa11.22□□□□□ -0.61
CLP1-201ENST00000302731 SIGLEC16A6NMB1 481 aa11.22□□□□□ -0.61
CLP1-201ENST00000302731 FSCN2O14926 492 aa11.22□□□□□ -0.61
CLP1-201ENST00000302731 PHF2O75151 1096 aa11.22□□□□□ -0.61
CLP1-201ENST00000302731 CAND2O75155 1236 aa11.22□□□□□ -0.61
CLP1-201ENST00000302731 ZMYND10O75800 440 aa11.22□□□□□ -0.61
CLP1-201ENST00000302731 MICAL2O94851 1124 aa11.22□□□□□ -0.61
CLP1-201ENST00000302731 SETSIPP0DME0 302 aa11.22□□□□□ -0.61
CLP1-201ENST00000302731 MYBL2P10244 700 aa11.22□□□□□ -0.61
CLP1-201ENST00000302731 ITGA4P13612 1032 aa11.22□□□□□ -0.61
CLP1-201ENST00000302731 AKAP5P24588 427 aa11.22□□□□□ -0.61
CLP1-201ENST00000302731 LRPAP1P30533 357 aa11.22□□□□□ -0.61
CLP1-201ENST00000302731 SSTR3P32745 418 aaPredicted RBP11.22□□□□□ -0.61
CLP1-201ENST00000302731 GPD2P43304 727 aa11.22□□□□□ -0.61
CLP1-201ENST00000302731 PLA2G4AP47712 749 aa11.22□□□□□ -0.61
CLP1-201ENST00000302731 CAP1Q01518 475 aa11.22□□□□□ -0.61
CLP1-201ENST00000302731 GUCY2DQ02846 1103 aa11.22□□□□□ -0.61
CLP1-201ENST00000302731 GPS2Q13227 327 aa11.22□□□□□ -0.61
CLP1-201ENST00000302731 C2CD6Q53TS8 623 aa11.22□□□□□ -0.61
CLP1-201ENST00000302731 FAM47CQ5HY64 1035 aa11.22□□□□□ -0.61
CLP1-201ENST00000302731 FBXO47Q5MNV8 452 aa11.22□□□□□ -0.61
CLP1-201ENST00000302731 DPH6Q7L8W6 267 aa11.22□□□□□ -0.61
CLP1-201ENST00000302731 LIMS2Q7Z4I7 341 aa11.22□□□□□ -0.61
CLP1-201ENST00000302731 RNF180Q86T96 592 aa11.22□□□□□ -0.61
CLP1-201ENST00000302731 KATNAL2Q8IYT4 538 aa11.22□□□□□ -0.61
CLP1-201ENST00000302731 C12orf50Q8NA57 414 aaPredicted RBP11.22□□□□□ -0.61
CLP1-201ENST00000302731 DDX27Q96GQ7 796 aaKnown RBP11.22□□□□□ -0.61
CLP1-201ENST00000302731 HEXIM2Q96MH2 286 aaKnown RBP11.22□□□□□ -0.61
CLP1-201ENST00000302731 DDX47Q9H0S4 455 aaKnown RBP11.22□□□□□ -0.61
CLP1-201ENST00000302731 CXCL16Q9H2A7 254 aa11.22□□□□□ -0.61
CLP1-201ENST00000302731 HMGXB4Q9UGU5 601 aa11.22□□□□□ -0.61
CLP1-201ENST00000302731 PCYOX1Q9UHG3 505 aa11.22□□□□□ -0.61
CLP1-201ENST00000302731 ST3GAL5Q9UNP4 418 aa11.22□□□□□ -0.61
CLP1-201ENST00000302731 SNX9Q9Y5X1 595 aa11.22□□□□□ -0.61
CLP1-201ENST00000302731 SQORQ9Y6N5 450 aa11.22□□□□□ -0.61
CLP1-201ENST00000302731 THSD7BQ9C0I4 1608 aa11.22□□□□□ -0.61
CLP1-201ENST00000302731 CHRNA1P02708 482 aa11.21□□□□□ -0.61
CLP1-201ENST00000302731 ELNP15502 786 aa11.21□□□□□ -0.61
CLP1-201ENST00000302731 TAF6P49848 677 aa11.21□□□□□ -0.61
CLP1-201ENST00000302731 APLP1P51693 650 aa11.21□□□□□ -0.61
CLP1-201ENST00000302731 PRMT2P55345 433 aa11.21□□□□□ -0.61
CLP1-201ENST00000302731 PTK7Q13308 1070 aa11.21□□□□□ -0.61
CLP1-201ENST00000302731 ARHGEF6Q15052 776 aa11.21□□□□□ -0.61
CLP1-201ENST00000302731 SV2CQ496J9 727 aa11.21□□□□□ -0.61
CLP1-201ENST00000302731 GLRA4Q5JXX5 417 aa11.21□□□□□ -0.61
CLP1-201ENST00000302731 ARHGAP17Q68EM7 881 aa11.21□□□□□ -0.61
CLP1-201ENST00000302731 LLGL2Q6P1M3 1020 aa11.21□□□□□ -0.61
CLP1-201ENST00000302731 DCUN1D2Q6PH85 259 aa11.21□□□□□ -0.61
CLP1-201ENST00000302731 TMEM130Q8N3G9 435 aa11.21□□□□□ -0.61
CLP1-201ENST00000302731 PRELID2Q8N945 189 aa11.21□□□□□ -0.61
CLP1-201ENST00000302731 EXD1Q8NHP7 514 aa11.21□□□□□ -0.61
CLP1-201ENST00000302731 C18orf25Q96B23 403 aaPredicted RBP11.21□□□□□ -0.61
CLP1-201ENST00000302731 APOL6Q9BWW8 343 aa11.21□□□□□ -0.61
CLP1-201ENST00000302731 RAB17Q9H0T7 212 aa11.21□□□□□ -0.61
CLP1-201ENST00000302731 FAM105AQ9NUU6 356 aa11.21□□□□□ -0.61
CLP1-201ENST00000302731 SLC38A7Q9NVC3 462 aa11.21□□□□□ -0.61
CLP1-201ENST00000302731 GRIN2DO15399 1336 aa11.21□□□□□ -0.61
CLP1-201ENST00000302731 MOXD2PA6NHM9 499 aa11.2□□□□□ -0.62
CLP1-201ENST00000302731 KPNA7A9QM74 516 aa11.2□□□□□ -0.62
CLP1-201ENST00000302731 M0QYV0 167 aa11.2□□□□□ -0.62
CLP1-201ENST00000302731 PPEF2O14830 753 aa11.2□□□□□ -0.62
CLP1-201ENST00000302731 KRT3P12035 628 aa11.2□□□□□ -0.62
CLP1-201ENST00000302731 SCN1AP35498 2009 aa11.2□□□□□ -0.62
CLP1-201ENST00000302731 CETN2P41208 172 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms