RNA–Protein interactions for RNA: ENST00000299866.12

TVP23A-201, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TVP23A, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-201ENST00000299866 MYH11P35749 1972 aa13.7□□□□□ -0.22
TVP23A-201ENST00000299866 LAMB2P55268 1798 aa13.7□□□□□ -0.22
TVP23A-201ENST00000299866 SGK1O00141 431 aa13.69□□□□□ -0.22
TVP23A-201ENST00000299866 TXNDC9O14530 226 aa13.69□□□□□ -0.22
TVP23A-201ENST00000299866 LIASO43766 372 aa13.69□□□□□ -0.22
TVP23A-201ENST00000299866 CFBP00751 764 aa13.69□□□□□ -0.22
TVP23A-201ENST00000299866 HARSP12081 509 aaKnown RBP13.69□□□□□ -0.22
TVP23A-201ENST00000299866 GTF2IP78347 998 aa13.69□□□□□ -0.22
TVP23A-201ENST00000299866 SAMD1Q6SPF0 538 aaPredicted RBP13.69□□□□□ -0.22
TVP23A-201ENST00000299866 SPATA24Q86W54 205 aa13.69□□□□□ -0.22
TVP23A-201ENST00000299866 PPP2R3CQ969Q6 453 aa13.69□□□□□ -0.22
TVP23A-201ENST00000299866 PHACTR1Q9C0D0 580 aa13.69□□□□□ -0.22
TVP23A-201ENST00000299866 VPS11Q9H270 941 aa13.69□□□□□ -0.22
TVP23A-201ENST00000299866 RPS6KL1Q9Y6S9 549 aa13.69□□□□□ -0.22
TVP23A-201ENST00000299866 COMMD3-BMI1R4GMX3 469 aa13.69□□□□□ -0.22
TVP23A-201ENST00000299866 E5RJQ4 531 aa13.69□□□□□ -0.22
TVP23A-201ENST00000299866 MT-ND3P03897 115 aa13.69□□□□□ -0.22
TVP23A-201ENST00000299866 INHBCP55103 352 aa13.69□□□□□ -0.22
TVP23A-201ENST00000299866 KRT72Q14CN4 511 aa13.69□□□□□ -0.22
TVP23A-201ENST00000299866 EFHC2Q5JST6 749 aa13.69□□□□□ -0.22
TVP23A-201ENST00000299866 NLRX1Q86UT6 975 aa13.69□□□□□ -0.22
TVP23A-201ENST00000299866 SHKBP1Q8TBC3 707 aa13.69□□□□□ -0.22
TVP23A-201ENST00000299866 NAT14Q8WUY8 206 aa13.69□□□□□ -0.22
TVP23A-201ENST00000299866 MTBPQ96DY7 904 aa13.69□□□□□ -0.22
TVP23A-201ENST00000299866 MPP4Q96JB8 637 aa13.69□□□□□ -0.22
TVP23A-201ENST00000299866 ACCSQ96QU6 501 aa13.69□□□□□ -0.22
TVP23A-201ENST00000299866 TMEM121Q9BTD3 319 aa13.69□□□□□ -0.22
TVP23A-201ENST00000299866 MARCOQ9UEW3 520 aaPredicted RBP13.69□□□□□ -0.22
TVP23A-201ENST00000299866 SLC4A7Q9Y6M7 1214 aa13.69□□□□□ -0.22
TVP23A-201ENST00000299866 DOT1LQ8TEK3 1739 aa13.69□□□□□ -0.22
TVP23A-201ENST00000299866 PFDN1O60925 122 aa13.69□□□□□ -0.22
TVP23A-201ENST00000299866 DNAJC6O75061 913 aa13.69□□□□□ -0.22
TVP23A-201ENST00000299866 CYP3A4P08684 503 aa13.69□□□□□ -0.22
TVP23A-201ENST00000299866 GLRA2P23416 452 aa13.69□□□□□ -0.22
TVP23A-201ENST00000299866 CIITAP33076 1130 aa13.69□□□□□ -0.22
TVP23A-201ENST00000299866 NSFP46459 744 aaKnown RBP13.69□□□□□ -0.22
TVP23A-201ENST00000299866 PRELPP51888 382 aa13.69□□□□□ -0.22
TVP23A-201ENST00000299866 HIF1AQ16665 826 aa13.69□□□□□ -0.22
TVP23A-201ENST00000299866 PADI6Q6TGC4 694 aa13.69□□□□□ -0.22
TVP23A-201ENST00000299866 SDCCAG8Q86SQ7 713 aaPredicted RBP13.69□□□□□ -0.22
TVP23A-201ENST00000299866 SATL1Q86VE3 508 aa13.69□□□□□ -0.22
TVP23A-201ENST00000299866 TMPRSS6Q8IU80 811 aa13.69□□□□□ -0.22
TVP23A-201ENST00000299866 ULK2Q8IYT8 1036 aa13.69□□□□□ -0.22
TVP23A-201ENST00000299866 BANPQ8N9N5 519 aa13.69□□□□□ -0.22
TVP23A-201ENST00000299866 SMC1BQ8NDV3 1235 aa13.69□□□□□ -0.22
TVP23A-201ENST00000299866 PYDC1Q8WXC3 89 aa13.69□□□□□ -0.22
TVP23A-201ENST00000299866 DNAJC1Q96KC8 554 aaKnown RBP13.69□□□□□ -0.22
TVP23A-201ENST00000299866 OLFM3Q96PB7 478 aa13.69□□□□□ -0.22
TVP23A-201ENST00000299866 LXNQ9BS40 222 aa13.69□□□□□ -0.22
TVP23A-201ENST00000299866 GINM1Q9NU53 330 aa13.69□□□□□ -0.22
TVP23A-201ENST00000299866 SLC7A8Q9UHI5 535 aa13.69□□□□□ -0.22
TVP23A-201ENST00000299866 ZBTB21Q9ULJ3 1066 aa13.69□□□□□ -0.22
TVP23A-201ENST00000299866 CLUHO75153 1309 aa13.69□□□□□ -0.22
TVP23A-201ENST00000299866 STK10O94804 968 aaKnown RBP13.68□□□□□ -0.22
TVP23A-201ENST00000299866 FAM200BP0CF97 657 aa13.68□□□□□ -0.22
TVP23A-201ENST00000299866 TCF4P15884 667 aa13.68□□□□□ -0.22
TVP23A-201ENST00000299866 RAP1GDS1P52306 607 aa13.68□□□□□ -0.22
TVP23A-201ENST00000299866 NFX1Q12986 1120 aaKnown RBP13.68□□□□□ -0.22
TVP23A-201ENST00000299866 LPCAT4Q643R3 524 aa13.68□□□□□ -0.22
TVP23A-201ENST00000299866 LCA5Q86VQ0 697 aa13.68□□□□□ -0.22
TVP23A-201ENST00000299866 RHPN2Q8IUC4 686 aa13.68□□□□□ -0.22
TVP23A-201ENST00000299866 PALM2Q8IXS6 379 aa13.68□□□□□ -0.22
TVP23A-201ENST00000299866 HIPK4Q8NE63 616 aa13.68□□□□□ -0.22
TVP23A-201ENST00000299866 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.68□□□□□ -0.22
TVP23A-201ENST00000299866 NCSTNQ92542 709 aa13.68□□□□□ -0.22
TVP23A-201ENST00000299866 IWS1Q96ST2 819 aa13.68□□□□□ -0.22
TVP23A-201ENST00000299866 IGLV3-22A0A075B6J6 115 aa13.68□□□□□ -0.22
TVP23A-201ENST00000299866 ARHGAP42A6NI28 874 aa13.68□□□□□ -0.22
TVP23A-201ENST00000299866 MEI4A8MW99 385 aa13.68□□□□□ -0.22
TVP23A-201ENST00000299866 VAV1P15498 845 aa13.68□□□□□ -0.22
TVP23A-201ENST00000299866 GRIA2P42262 883 aa13.68□□□□□ -0.22
TVP23A-201ENST00000299866 SCNN1DP51172 638 aa13.68□□□□□ -0.22
TVP23A-201ENST00000299866 BBS9Q3SYG4 887 aa13.68□□□□□ -0.22
TVP23A-201ENST00000299866 MSS51Q4VC12 460 aa13.68□□□□□ -0.22
TVP23A-201ENST00000299866 OLFML2BQ68BL8 750 aa13.68□□□□□ -0.22
TVP23A-201ENST00000299866 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.68□□□□□ -0.22
TVP23A-201ENST00000299866 SMYD3Q9H7B4 428 aa13.68□□□□□ -0.22
TVP23A-201ENST00000299866 TMEM206Q9H813 350 aa13.68□□□□□ -0.22
TVP23A-201ENST00000299866 CCDC195A0A1B0GUA6 201 aa13.68□□□□□ -0.22
TVP23A-201ENST00000299866 CCDC160A6NGH7 325 aa13.68□□□□□ -0.22
TVP23A-201ENST00000299866 SPECC1L-ADORA2AF8WAN1 911 aa13.68□□□□□ -0.22
TVP23A-201ENST00000299866 PSMD10O75832 226 aa13.68□□□□□ -0.22
TVP23A-201ENST00000299866 KRT1P04264 644 aa13.68□□□□□ -0.22
TVP23A-201ENST00000299866 CRABP2P29373 138 aa13.68□□□□□ -0.22
TVP23A-201ENST00000299866 ALDH18A1P54886 795 aaKnown RBP13.68□□□□□ -0.22
TVP23A-201ENST00000299866 MED21Q13503 144 aa13.68□□□□□ -0.22
TVP23A-201ENST00000299866 GRAPQ13588 217 aa13.68□□□□□ -0.22
TVP23A-201ENST00000299866 KRT39Q6A163 491 aa13.68□□□□□ -0.22
TVP23A-201ENST00000299866 MFSD7Q6UXD7 560 aa13.68□□□□□ -0.22
TVP23A-201ENST00000299866 NET1Q7Z628 596 aaPredicted RBP13.68□□□□□ -0.22
TVP23A-201ENST00000299866 MYLK4Q86YV6 388 aaPredicted RBP13.68□□□□□ -0.22
TVP23A-201ENST00000299866 GRAPLQ8TC17 118 aaPredicted RBP13.68□□□□□ -0.22
TVP23A-201ENST00000299866 POMGNT1Q8WZA1 660 aa13.68□□□□□ -0.22
TVP23A-201ENST00000299866 HAPLN3Q96S86 360 aa13.68□□□□□ -0.22
TVP23A-201ENST00000299866 UNC45AQ9H3U1 944 aa13.68□□□□□ -0.22
TVP23A-201ENST00000299866 ZNF395Q9H8N7 513 aaPredicted RBP13.68□□□□□ -0.22
TVP23A-201ENST00000299866 NHSQ6T4R5 1651 aa13.67□□□□□ -0.22
TVP23A-201ENST00000299866 DENND3A2RUS2 1198 aa13.67□□□□□ -0.22
TVP23A-201ENST00000299866 TM9SF1O15321 606 aa13.67□□□□□ -0.22
TVP23A-201ENST00000299866 SLC16A4O15374 487 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms