RNA–Protein interactions for RNA: ENST00000299855.9

MMP3-201, Transcript of matrix metallopeptidase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MMP3, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3-201ENST00000299855 CNNM4Q6P4Q7 775 aa9.63□□□□□ -0.87
MMP3-201ENST00000299855 CROCCP2Q86T23 111 aa9.63□□□□□ -0.87
MMP3-201ENST00000299855 CAMKK1Q8N5S9 505 aa9.63□□□□□ -0.87
MMP3-201ENST00000299855 PDCD7Q8N8D1 485 aaKnown RBP9.63□□□□□ -0.87
MMP3-201ENST00000299855 CCDC197Q8NCU1 140 aa9.63□□□□□ -0.87
MMP3-201ENST00000299855 SUPT20HQ8NEM7 779 aa9.63□□□□□ -0.87
MMP3-201ENST00000299855 LPIN2Q92539 896 aa9.63□□□□□ -0.87
MMP3-201ENST00000299855 CDKL2Q92772 493 aa9.63□□□□□ -0.87
MMP3-201ENST00000299855 CDCA5Q96FF9 252 aa9.63□□□□□ -0.87
MMP3-201ENST00000299855 CHMP6Q96FZ7 201 aa9.63□□□□□ -0.87
MMP3-201ENST00000299855 EAF1Q96JC9 268 aaPredicted RBP9.63□□□□□ -0.87
MMP3-201ENST00000299855 AK8Q96MA6 479 aa9.63□□□□□ -0.87
MMP3-201ENST00000299855 KRT12Q99456 494 aa9.63□□□□□ -0.87
MMP3-201ENST00000299855 WNT5BQ9H1J7 359 aa9.63□□□□□ -0.87
MMP3-201ENST00000299855 CRLF2Q9HC73 371 aa9.63□□□□□ -0.87
MMP3-201ENST00000299855 SALL4Q9UJQ4 1053 aa9.63□□□□□ -0.87
MMP3-201ENST00000299855 JAG2Q9Y219 1238 aa9.63□□□□□ -0.87
MMP3-201ENST00000299855 LRCH1Q9Y2L9 728 aa9.63□□□□□ -0.87
MMP3-201ENST00000299855 ZNF711Q9Y462 761 aa9.63□□□□□ -0.87
MMP3-201ENST00000299855 MYH7BA7E2Y1 1941 aa9.63□□□□□ -0.87
MMP3-201ENST00000299855 UBR2Q8IWV8 1755 aa9.63□□□□□ -0.87
MMP3-201ENST00000299855 TXNL1O43396 289 aa9.63□□□□□ -0.87
MMP3-201ENST00000299855 SLITRK5O94991 958 aa9.63□□□□□ -0.87
MMP3-201ENST00000299855 MYCLP12524 364 aaPredicted RBP9.63□□□□□ -0.87
MMP3-201ENST00000299855 ALADP13716 330 aa9.63□□□□□ -0.87
MMP3-201ENST00000299855 MCM7P33993 719 aa9.63□□□□□ -0.87
MMP3-201ENST00000299855 RPIAP49247 311 aa9.63□□□□□ -0.87
MMP3-201ENST00000299855 ARFIP1P53367 373 aa9.63□□□□□ -0.87
MMP3-201ENST00000299855 DMPKQ09013 629 aa9.63□□□□□ -0.87
MMP3-201ENST00000299855 TROAPQ12815 778 aa9.63□□□□□ -0.87
MMP3-201ENST00000299855 NFIAQ12857 509 aa9.63□□□□□ -0.87
MMP3-201ENST00000299855 TUBA3CQ13748 450 aa9.63□□□□□ -0.87
MMP3-201ENST00000299855 STK11Q15831 433 aa9.63□□□□□ -0.87
MMP3-201ENST00000299855 SLC9C1Q4G0N8 1177 aa9.63□□□□□ -0.87
MMP3-201ENST00000299855 SMUG1Q53HV7 270 aa9.63□□□□□ -0.87
MMP3-201ENST00000299855 DCAF17Q5H9S7 520 aaPredicted RBP9.63□□□□□ -0.87
MMP3-201ENST00000299855 TMTC3Q6ZXV5 915 aa9.63□□□□□ -0.87
MMP3-201ENST00000299855 GPR155Q7Z3F1 870 aa9.63□□□□□ -0.87
MMP3-201ENST00000299855 PIGWQ7Z7B1 504 aa9.63□□□□□ -0.87
MMP3-201ENST00000299855 ACTRT1Q8TDG2 376 aa9.63□□□□□ -0.87
MMP3-201ENST00000299855 ZNF483Q8TF39 744 aaPredicted RBP9.63□□□□□ -0.87
MMP3-201ENST00000299855 SAAL1Q96ER3 474 aa9.63□□□□□ -0.87
MMP3-201ENST00000299855 ZSCAN10Q96SZ4 725 aaPredicted RBP9.63□□□□□ -0.87
MMP3-201ENST00000299855 UBN1Q9NPG3 1134 aa9.63□□□□□ -0.87
MMP3-201ENST00000299855 ACTR10Q9NZ32 417 aa9.63□□□□□ -0.87
MMP3-201ENST00000299855 MOSPD1Q9UJG1 213 aa9.63□□□□□ -0.87
MMP3-201ENST00000299855 SLC12A4Q9UP95 1085 aa9.63□□□□□ -0.87
MMP3-201ENST00000299855 C15orf41Q9Y2V0 281 aa9.63□□□□□ -0.87
MMP3-201ENST00000299855 PCDHGB5Q9Y5G0 923 aa9.63□□□□□ -0.87
MMP3-201ENST00000299855 RAD51CO43502 376 aa9.62□□□□□ -0.87
MMP3-201ENST00000299855 TSPAN1O60635 241 aa9.62□□□□□ -0.87
MMP3-201ENST00000299855 SERPING1P05155 500 aa9.62□□□□□ -0.87
MMP3-201ENST00000299855 SCG2P13521 617 aa9.62□□□□□ -0.87
MMP3-201ENST00000299855 ARF4P18085 180 aaPredicted RBP9.62□□□□□ -0.87
MMP3-201ENST00000299855 FGFR2P21802 821 aa9.62□□□□□ -0.87
MMP3-201ENST00000299855 ECHS1P30084 290 aa9.62□□□□□ -0.87
MMP3-201ENST00000299855 MRPS25P82663 173 aaKnown RBP9.62□□□□□ -0.87
MMP3-201ENST00000299855 MAP7Q14244 749 aa9.62□□□□□ -0.87
MMP3-201ENST00000299855 IFI16Q16666 785 aaKnown RBP9.62□□□□□ -0.87
MMP3-201ENST00000299855 PFKFB3Q16875 520 aaPredicted RBP9.62□□□□□ -0.87
MMP3-201ENST00000299855 ZNF362Q5T0B9 420 aaPredicted RBP9.62□□□□□ -0.87
MMP3-201ENST00000299855 PIK3AP1Q6ZUJ8 805 aa9.62□□□□□ -0.87
MMP3-201ENST00000299855 KRT74Q7RTS7 529 aa9.62□□□□□ -0.87
MMP3-201ENST00000299855 APLFQ8IW19 511 aaPredicted RBP9.62□□□□□ -0.87
MMP3-201ENST00000299855 FAM169BQ8N8A8 192 aa9.62□□□□□ -0.87
MMP3-201ENST00000299855 CCDC63Q8NA47 563 aa9.62□□□□□ -0.87
MMP3-201ENST00000299855 AVL9Q8NBF6 648 aa9.62□□□□□ -0.87
MMP3-201ENST00000299855 SEC14L1Q92503 715 aa9.62□□□□□ -0.87
MMP3-201ENST00000299855 RBM17Q96I25 401 aaKnown RBP9.62□□□□□ -0.87
MMP3-201ENST00000299855 MS4A14Q96JA4 679 aa9.62□□□□□ -0.87
MMP3-201ENST00000299855 FAM193BQ96PV7 902 aaPredicted RBP9.62□□□□□ -0.87
MMP3-201ENST00000299855 DDX23Q9BUQ8 820 aaKnown RBP9.62□□□□□ -0.87
MMP3-201ENST00000299855 FOXP3Q9BZS1 431 aa9.62□□□□□ -0.87
MMP3-201ENST00000299855 GLT8D2Q9H1C3 349 aa9.62□□□□□ -0.87
MMP3-201ENST00000299855 ARMT1Q9H993 441 aa9.62□□□□□ -0.87
MMP3-201ENST00000299855 EHMT1Q9H9B1 1298 aa9.62□□□□□ -0.87
MMP3-201ENST00000299855 EHD2Q9NZN4 543 aa9.62□□□□□ -0.87
MMP3-201ENST00000299855 ADGRE2Q9UHX3 823 aa9.62□□□□□ -0.87
MMP3-201ENST00000299855 ZMYM5Q9UJ78 669 aa9.62□□□□□ -0.87
MMP3-201ENST00000299855 ITGB1BP2Q9UKP3 347 aa9.62□□□□□ -0.87
MMP3-201ENST00000299855 PCDHB12Q9Y5F1 795 aa9.62□□□□□ -0.87
MMP3-201ENST00000299855 ARAP2Q8WZ64 1704 aa9.62□□□□□ -0.87
MMP3-201ENST00000299855 ATP8B3O60423 1300 aa9.62□□□□□ -0.87
MMP3-201ENST00000299855 LRRC53A6NM62 1247 aa9.61□□□□□ -0.87
MMP3-201ENST00000299855 NCK2O43639 380 aa9.61□□□□□ -0.87
MMP3-201ENST00000299855 BUB1BO60566 1050 aaPredicted RBP9.61□□□□□ -0.87
MMP3-201ENST00000299855 KCNJ13O60928 360 aa9.61□□□□□ -0.87
MMP3-201ENST00000299855 SIN3BO75182 1162 aa9.61□□□□□ -0.87
MMP3-201ENST00000299855 OLFM2O95897 454 aa9.61□□□□□ -0.87
MMP3-201ENST00000299855 PLATP00750 562 aa9.61□□□□□ -0.87
MMP3-201ENST00000299855 ITGB1P05556 798 aa9.61□□□□□ -0.87
MMP3-201ENST00000299855 CCND1P24385 295 aa9.61□□□□□ -0.87
MMP3-201ENST00000299855 TCF7P36402 384 aaPredicted RBP9.61□□□□□ -0.87
MMP3-201ENST00000299855 CCNG1P51959 295 aa9.61□□□□□ -0.87
MMP3-201ENST00000299855 YARSP54577 528 aaKnown RBP9.61□□□□□ -0.87
MMP3-201ENST00000299855 DPYSQ14117 519 aa9.61□□□□□ -0.87
MMP3-201ENST00000299855 UAP1Q16222 522 aaPredicted RBP9.61□□□□□ -0.87
MMP3-201ENST00000299855 IFIT1BQ5T764 474 aaKnown RBP9.61□□□□□ -0.87
MMP3-201ENST00000299855 HGSNATQ68CP4 663 aa9.61□□□□□ -0.87
MMP3-201ENST00000299855 NAIF1Q69YI7 327 aaPredicted RBP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms