RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 PLEKHG1Q9ULL1 1385 aa15.47■□□□□ 0.07
SCN3B-201ENST00000299333 EVPLLA8MZ36 301 aa15.47■□□□□ 0.07
SCN3B-201ENST00000299333 TRIM13O60858 407 aa15.47■□□□□ 0.07
SCN3B-201ENST00000299333 FAM58BPP0C7Q3 252 aa15.47■□□□□ 0.07
SCN3B-201ENST00000299333 HSMCR30P0CW71 290 aa15.47■□□□□ 0.07
SCN3B-201ENST00000299333 COILP38432 576 aaPredicted RBP15.47■□□□□ 0.07
SCN3B-201ENST00000299333 SULT1E1P49888 294 aa15.47■□□□□ 0.07
SCN3B-201ENST00000299333 POLR3FQ9H1D9 316 aaPredicted RBP15.47■□□□□ 0.07
SCN3B-201ENST00000299333 PRELID1Q9Y255 219 aa15.47■□□□□ 0.07
SCN3B-201ENST00000299333 TRPC5OSA6NMA1 111 aa15.47■□□□□ 0.07
SCN3B-201ENST00000299333 PPEF1O14829 653 aaPredicted RBP15.47■□□□□ 0.07
SCN3B-201ENST00000299333 ZNF862O60290 1169 aa15.47■□□□□ 0.07
SCN3B-201ENST00000299333 CALB2P22676 271 aa15.47■□□□□ 0.07
SCN3B-201ENST00000299333 ADSSL1Q8N142 457 aa15.47■□□□□ 0.07
SCN3B-201ENST00000299333 USP17L10C9JJH3 530 aa15.46■□□□□ 0.07
SCN3B-201ENST00000299333 CLASP2O75122 1294 aaKnown RBP15.46■□□□□ 0.07
SCN3B-201ENST00000299333 SOAT1P35610 550 aa15.46■□□□□ 0.07
SCN3B-201ENST00000299333 NUP62P37198 522 aaPredicted RBP15.46■□□□□ 0.07
SCN3B-201ENST00000299333 HSD17B4P51659 736 aa15.46■□□□□ 0.07
SCN3B-201ENST00000299333 C18orf8Q96DM3 657 aa15.46■□□□□ 0.07
SCN3B-201ENST00000299333 SGF29Q96ES7 293 aa15.46■□□□□ 0.07
SCN3B-201ENST00000299333 TRAPPC9Q96Q05 1148 aa15.46■□□□□ 0.07
SCN3B-201ENST00000299333 LXNQ9BS40 222 aa15.46■□□□□ 0.07
SCN3B-201ENST00000299333 SLC39A10Q9ULF5 831 aa15.46■□□□□ 0.07
SCN3B-201ENST00000299333 P4HA2O15460 535 aa15.46■□□□□ 0.07
SCN3B-201ENST00000299333 THRAP10827 490 aa15.46■□□□□ 0.07
SCN3B-201ENST00000299333 H2AFXP16104 143 aaPredicted RBP15.46■□□□□ 0.07
SCN3B-201ENST00000299333 KHDRBS2Q5VWX1 349 aaKnown RBP15.46■□□□□ 0.07
SCN3B-201ENST00000299333 DCPSQ96C86 337 aaKnown RBP15.46■□□□□ 0.07
SCN3B-201ENST00000299333 CACNA2D2Q9NY47 1150 aa15.46■□□□□ 0.07
SCN3B-201ENST00000299333 MLH3Q9UHC1 1453 aa15.46■□□□□ 0.07
SCN3B-201ENST00000299333 POLBP06746 335 aa15.46■□□□□ 0.07
SCN3B-201ENST00000299333 PHKA2P46019 1235 aa15.46■□□□□ 0.07
SCN3B-201ENST00000299333 DPYDQ12882 1025 aa15.46■□□□□ 0.07
SCN3B-201ENST00000299333 TCAIMQ8N3R3 496 aa15.46■□□□□ 0.07
SCN3B-201ENST00000299333 CLEC4MQ9H2X3 399 aaPredicted RBP15.46■□□□□ 0.07
SCN3B-201ENST00000299333 PABPC3Q9H361 631 aaKnown RBP15.46■□□□□ 0.07
SCN3B-201ENST00000299333 FANCEQ9HB96 536 aa15.46■□□□□ 0.07
SCN3B-201ENST00000299333 RIC8BQ9NVN3 520 aa15.46■□□□□ 0.07
SCN3B-201ENST00000299333 F8VZ95 297 aa15.46■□□□□ 0.07
SCN3B-201ENST00000299333 PDXKO00764 312 aa15.46■□□□□ 0.07
SCN3B-201ENST00000299333 KLRC1P26715 233 aa15.46■□□□□ 0.07
SCN3B-201ENST00000299333 C21orf59P57076 290 aa15.46■□□□□ 0.07
SCN3B-201ENST00000299333 CACNB2Q08289 660 aaPredicted RBP15.46■□□□□ 0.07
SCN3B-201ENST00000299333 SLC25A41Q8N5S1 370 aa15.46■□□□□ 0.07
SCN3B-201ENST00000299333 MAML3Q96JK9 1138 aa15.46■□□□□ 0.07
SCN3B-201ENST00000299333 ROGDIQ9GZN7 287 aa15.46■□□□□ 0.07
SCN3B-201ENST00000299333 LATS2Q9NRM7 1088 aa15.46■□□□□ 0.07
SCN3B-201ENST00000299333 METTL5Q9NRN9 209 aaKnown RBP15.46■□□□□ 0.07
SCN3B-201ENST00000299333 SAC3D1A6NKF1 404 aa15.46■□□□□ 0.06
SCN3B-201ENST00000299333 O00370 1275 aa15.46■□□□□ 0.06
SCN3B-201ENST00000299333 ERFEQ4G0M1 354 aa15.46■□□□□ 0.06
SCN3B-201ENST00000299333 SH3RF3Q8TEJ3 882 aaPredicted RBP15.46■□□□□ 0.06
SCN3B-201ENST00000299333 EPS8L2Q9H6S3 715 aa15.46■□□□□ 0.06
SCN3B-201ENST00000299333 AGO2Q9UKV8 859 aaKnown RBP15.46■□□□□ 0.06
SCN3B-201ENST00000299333 R3HDM2Q9Y2K5 976 aaKnown RBP15.46■□□□□ 0.06
SCN3B-201ENST00000299333 NDUFS3O75489 264 aa15.45■□□□□ 0.06
SCN3B-201ENST00000299333 RGS20O76081 388 aa15.45■□□□□ 0.06
SCN3B-201ENST00000299333 PARNO95453 639 aaKnown RBP15.45■□□□□ 0.06
SCN3B-201ENST00000299333 P4HBP07237 508 aaKnown RBP15.45■□□□□ 0.06
SCN3B-201ENST00000299333 PDGFRAP16234 1089 aa15.45■□□□□ 0.06
SCN3B-201ENST00000299333 PTPN7P35236 360 aa15.45■□□□□ 0.06
SCN3B-201ENST00000299333 SEMA3FQ13275 785 aa15.45■□□□□ 0.06
SCN3B-201ENST00000299333 DCTN2Q13561 401 aaKnown RBP15.45■□□□□ 0.06
SCN3B-201ENST00000299333 SDE2Q6IQ49 451 aa15.45■□□□□ 0.06
SCN3B-201ENST00000299333 ZBTB49Q6ZSB9 765 aa15.45■□□□□ 0.06
SCN3B-201ENST00000299333 FAM43BQ6ZT52 329 aaPredicted RBP15.45■□□□□ 0.06
SCN3B-201ENST00000299333 SNX31Q8N9S9 440 aa15.45■□□□□ 0.06
SCN3B-201ENST00000299333 ANKS1AQ92625 1134 aa15.45■□□□□ 0.06
SCN3B-201ENST00000299333 EIF2AK1Q9BQI3 630 aaKnown RBP15.45■□□□□ 0.06
SCN3B-201ENST00000299333 C6orf62Q9GZU0 229 aaPredicted RBP15.45■□□□□ 0.06
SCN3B-201ENST00000299333 EFCAB1Q9HAE3 211 aa15.45■□□□□ 0.06
SCN3B-201ENST00000299333 DNAJC5BQ9UF47 199 aa15.45■□□□□ 0.06
SCN3B-201ENST00000299333 ALG6Q9Y672 507 aa15.45■□□□□ 0.06
SCN3B-201ENST00000299333 ARHGAP31Q2M1Z3 1444 aa15.45■□□□□ 0.06
SCN3B-201ENST00000299333 ATP6V1B2P21281 511 aa15.45■□□□□ 0.06
SCN3B-201ENST00000299333 QARSP47897 775 aaKnown RBP15.45■□□□□ 0.06
SCN3B-201ENST00000299333 EFHC1Q5JVL4 640 aa15.45■□□□□ 0.06
SCN3B-201ENST00000299333 RDM1Q8NG50 284 aa15.45■□□□□ 0.06
SCN3B-201ENST00000299333 SPATA18Q8TC71 538 aa15.45■□□□□ 0.06
SCN3B-201ENST00000299333 RMDN3Q96TC7 470 aa15.45■□□□□ 0.06
SCN3B-201ENST00000299333 TRIM9Q9C026 710 aa15.45■□□□□ 0.06
SCN3B-201ENST00000299333 ILKAPQ9H0C8 392 aaPredicted RBP15.45■□□□□ 0.06
SCN3B-201ENST00000299333 BARHL2Q9NY43 387 aa15.45■□□□□ 0.06
SCN3B-201ENST00000299333 PAK5Q9P286 719 aa15.45■□□□□ 0.06
SCN3B-201ENST00000299333 PTCH1Q13635 1447 aa15.45■□□□□ 0.06
SCN3B-201ENST00000299333 PRDM15P57071 1507 aaPredicted RBP15.45■□□□□ 0.06
SCN3B-201ENST00000299333 SLC16A3O15427 465 aaKnown RBP15.45■□□□□ 0.06
SCN3B-201ENST00000299333 PTPN4P29074 926 aa15.45■□□□□ 0.06
SCN3B-201ENST00000299333 LRRC8DQ7L1W4 858 aa15.45■□□□□ 0.06
SCN3B-201ENST00000299333 MIER2Q8N344 545 aa15.45■□□□□ 0.06
SCN3B-201ENST00000299333 DCAF4Q8WV16 495 aa15.45■□□□□ 0.06
SCN3B-201ENST00000299333 CEP44Q9C0F1 390 aa15.45■□□□□ 0.06
SCN3B-201ENST00000299333 TAGLN3Q9UI15 199 aa15.45■□□□□ 0.06
SCN3B-201ENST00000299333 CDC40O60508 579 aaKnown RBP eCLIP15.45■□□□□ 0.06
SCN3B-201ENST00000299333 PSMB9P28065 219 aa15.45■□□□□ 0.06
SCN3B-201ENST00000299333 CENPAP49450 140 aa15.45■□□□□ 0.06
SCN3B-201ENST00000299333 MMRN1Q13201 1228 aa15.45■□□□□ 0.06
SCN3B-201ENST00000299333 C12orf60Q5U649 245 aa15.45■□□□□ 0.06
SCN3B-201ENST00000299333 RBBP8NLQ8NC74 664 aaPredicted RBP15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms