RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 ZBTB8OSQ8IWT0 167 aa22.68■■□□□ 1.22
SMCO4-201ENST00000298966 RTN4Q9NQC3 1192 aaKnown RBP22.68■■□□□ 1.22
SMCO4-201ENST00000298966 AGPAT3Q9NRZ7 376 aa22.68■■□□□ 1.22
SMCO4-201ENST00000298966 MRPS23Q9Y3D9 190 aaKnown RBP22.68■■□□□ 1.22
SMCO4-201ENST00000298966 CASTOR2A6NHX0 329 aa22.67■■□□□ 1.22
SMCO4-201ENST00000298966 N4BP3O15049 544 aa22.67■■□□□ 1.22
SMCO4-201ENST00000298966 MAPK13O15264 365 aa22.67■■□□□ 1.22
SMCO4-201ENST00000298966 B4GALT5O43286 388 aa22.67■■□□□ 1.22
SMCO4-201ENST00000298966 ECI2O75521 394 aa22.67■■□□□ 1.22
SMCO4-201ENST00000298966 KIF4AO95239 1232 aa22.67■■□□□ 1.22
SMCO4-201ENST00000298966 EPB41P11171 864 aaKnown RBP22.67■■□□□ 1.22
SMCO4-201ENST00000298966 TGM1P22735 817 aa22.67■■□□□ 1.22
SMCO4-201ENST00000298966 MTIF2P46199 727 aaKnown RBP22.67■■□□□ 1.22
SMCO4-201ENST00000298966 MAN2A1Q16706 1144 aa22.67■■□□□ 1.22
SMCO4-201ENST00000298966 CCDC40Q4G0X9 1142 aa22.67■■□□□ 1.22
SMCO4-201ENST00000298966 CDCA2Q69YH5 1023 aaPredicted RBP22.67■■□□□ 1.22
SMCO4-201ENST00000298966 SPC24Q8NBT2 197 aa22.67■■□□□ 1.22
SMCO4-201ENST00000298966 ASAP3Q8TDY4 903 aa22.67■■□□□ 1.22
SMCO4-201ENST00000298966 ING5Q8WYH8 240 aa22.67■■□□□ 1.22
SMCO4-201ENST00000298966 NAP1L5Q96NT1 182 aaPredicted RBP22.67■■□□□ 1.22
SMCO4-201ENST00000298966 TUBGCP2Q9BSJ2 902 aa22.67■■□□□ 1.22
SMCO4-201ENST00000298966 HCFC1R1Q9NWW0 138 aa22.67■■□□□ 1.22
SMCO4-201ENST00000298966 F5P12259 2224 aa22.67■■□□□ 1.22
SMCO4-201ENST00000298966 A0A1B0GUA9 196 aa22.66■■□□□ 1.22
SMCO4-201ENST00000298966 LRRIQ4A6NIV6 560 aa22.66■■□□□ 1.22
SMCO4-201ENST00000298966 ADAM12O43184 909 aa22.66■■□□□ 1.22
SMCO4-201ENST00000298966 PIGRP01833 764 aa22.66■■□□□ 1.22
SMCO4-201ENST00000298966 ADRB1P08588 477 aa22.66■■□□□ 1.22
SMCO4-201ENST00000298966 ADCY1Q08828 1119 aa22.66■■□□□ 1.22
SMCO4-201ENST00000298966 RAB33AQ14088 237 aa22.66■■□□□ 1.22
SMCO4-201ENST00000298966 HSP90AA4PQ58FG1 418 aa22.66■■□□□ 1.22
SMCO4-201ENST00000298966 RTL10Q7L3V2 364 aa22.66■■□□□ 1.22
SMCO4-201ENST00000298966 VSTM4Q8IW00 320 aa22.66■■□□□ 1.22
SMCO4-201ENST00000298966 PARD6AQ9NPB6 346 aa22.66■■□□□ 1.22
SMCO4-201ENST00000298966 HEBP1Q9NRV9 189 aa22.66■■□□□ 1.22
SMCO4-201ENST00000298966 INTS13Q9NVM9 706 aa22.66■■□□□ 1.22
SMCO4-201ENST00000298966 DMAC2Q9NW81 257 aa22.66■■□□□ 1.22
SMCO4-201ENST00000298966 DNMT3BQ9UBC3 853 aaKnown RBP22.66■■□□□ 1.22
SMCO4-201ENST00000298966 VWA8A3KMH1 1905 aa22.66■■□□□ 1.22
SMCO4-201ENST00000298966 ITIH6Q6UXX5 1313 aa22.65■■□□□ 1.22
SMCO4-201ENST00000298966 LGALS16A8MUM7 142 aa22.65■■□□□ 1.22
SMCO4-201ENST00000298966 K7ERI5 159 aa22.65■■□□□ 1.22
SMCO4-201ENST00000298966 OR1D2P34982 312 aa22.65■■□□□ 1.22
SMCO4-201ENST00000298966 PSMC2P35998 433 aaKnown RBP22.65■■□□□ 1.22
SMCO4-201ENST00000298966 NRLP54845 237 aa22.65■■□□□ 1.22
SMCO4-201ENST00000298966 GSDMDP57764 484 aa22.65■■□□□ 1.22
SMCO4-201ENST00000298966 KCNA1Q09470 495 aa22.65■■□□□ 1.22
SMCO4-201ENST00000298966 MTAPQ13126 283 aa22.65■■□□□ 1.22
SMCO4-201ENST00000298966 PPP2R5DQ14738 602 aa22.65■■□□□ 1.22
SMCO4-201ENST00000298966 SLFN12LQ6IEE8 588 aa22.65■■□□□ 1.22
SMCO4-201ENST00000298966 IQCDQ96DY2 449 aa22.65■■□□□ 1.22
SMCO4-201ENST00000298966 MCRS1Q96EZ8 462 aa22.65■■□□□ 1.22
SMCO4-201ENST00000298966 GDE1Q9NZC3 331 aa22.65■■□□□ 1.22
SMCO4-201ENST00000298966 FRMD4BQ9Y2L6 1034 aa22.65■■□□□ 1.22
SMCO4-201ENST00000298966 CACNA1GO43497 2377 aa22.65■■□□□ 1.22
SMCO4-201ENST00000298966 A0A1W2PQC6 194 aa22.64■■□□□ 1.21
SMCO4-201ENST00000298966 THP07101 528 aa22.64■■□□□ 1.21
SMCO4-201ENST00000298966 GARTP22102 1010 aa22.64■■□□□ 1.21
SMCO4-201ENST00000298966 ENPEPQ07075 957 aa22.64■■□□□ 1.21
SMCO4-201ENST00000298966 SPEM2Q0P670 501 aa22.64■■□□□ 1.21
SMCO4-201ENST00000298966 FKBP15Q5T1M5 1219 aa22.64■■□□□ 1.21
SMCO4-201ENST00000298966 ZPBP2Q6X784 338 aa22.64■■□□□ 1.21
SMCO4-201ENST00000298966 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.64■■□□□ 1.21
SMCO4-201ENST00000298966 DNASE1L2Q92874 299 aa22.64■■□□□ 1.21
SMCO4-201ENST00000298966 PLA2G2FQ9BZM2 168 aa22.64■■□□□ 1.21
SMCO4-201ENST00000298966 ARMCX3Q9UH62 379 aaPredicted RBP22.64■■□□□ 1.21
SMCO4-201ENST00000298966 MAN2B1O00754 1011 aa22.63■■□□□ 1.21
SMCO4-201ENST00000298966 FZD5Q13467 585 aa22.63■■□□□ 1.21
SMCO4-201ENST00000298966 LAIR1Q6GTX8 287 aa22.63■■□□□ 1.21
SMCO4-201ENST00000298966 ARMCX5Q6P1M9 558 aa22.63■■□□□ 1.21
SMCO4-201ENST00000298966 NETO1Q8TDF5 533 aa22.63■■□□□ 1.21
SMCO4-201ENST00000298966 KIAA1586Q9HCI6 787 aa22.63■■□□□ 1.21
SMCO4-201ENST00000298966 TAB2Q9NYJ8 693 aa22.63■■□□□ 1.21
SMCO4-201ENST00000298966 NDRG2Q9UN36 371 aaKnown RBP22.63■■□□□ 1.21
SMCO4-201ENST00000298966 PTGESO14684 152 aa22.62■■□□□ 1.21
SMCO4-201ENST00000298966 HNRNPDLO14979 420 aaKnown RBP22.62■■□□□ 1.21
SMCO4-201ENST00000298966 TRIM14Q14142 442 aa22.62■■□□□ 1.21
SMCO4-201ENST00000298966 LPAL2Q16609 132 aa22.62■■□□□ 1.21
SMCO4-201ENST00000298966 MAPK6Q16659 721 aa22.62■■□□□ 1.21
SMCO4-201ENST00000298966 VWA3BQ502W6 1294 aa22.62■■□□□ 1.21
SMCO4-201ENST00000298966 SPECC1LQ69YQ0 1117 aa22.62■■□□□ 1.21
SMCO4-201ENST00000298966 CCDC186Q7Z3E2 898 aa22.62■■□□□ 1.21
SMCO4-201ENST00000298966 TMC6Q7Z403 805 aa22.62■■□□□ 1.21
SMCO4-201ENST00000298966 CREBRFQ8IUR6 639 aa22.62■■□□□ 1.21
SMCO4-201ENST00000298966 TRIM59Q8IWR1 403 aa22.62■■□□□ 1.21
SMCO4-201ENST00000298966 CELF5Q8N6W0 485 aaKnown RBP22.62■■□□□ 1.21
SMCO4-201ENST00000298966 XXYLT1Q8NBI6 393 aa22.62■■□□□ 1.21
SMCO4-201ENST00000298966 ELSPBP1Q96BH3 223 aa22.62■■□□□ 1.21
SMCO4-201ENST00000298966 PRIMPOLQ96LW4 560 aa22.62■■□□□ 1.21
SMCO4-201ENST00000298966 IER2Q9BTL4 223 aa22.62■■□□□ 1.21
SMCO4-201ENST00000298966 VPS16Q9H269 839 aa22.62■■□□□ 1.21
SMCO4-201ENST00000298966 CHRDQ9H2X0 955 aa22.62■■□□□ 1.21
SMCO4-201ENST00000298966 PRMT7Q9NVM4 692 aaPredicted RBP22.62■■□□□ 1.21
SMCO4-201ENST00000298966 MTRRQ9UBK8 725 aa22.62■■□□□ 1.21
SMCO4-201ENST00000298966 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.62■■□□□ 1.21
SMCO4-201ENST00000298966 RALGAPA1Q6GYQ0 2036 aa22.62■■□□□ 1.21
SMCO4-201ENST00000298966 USP24Q9UPU5 2620 aa22.61■■□□□ 1.21
SMCO4-201ENST00000298966 CHD6Q8TD26 2715 aa22.61■■□□□ 1.21
SMCO4-201ENST00000298966 RHOP08100 348 aa22.61■■□□□ 1.21
SMCO4-201ENST00000298966 PBX1P40424 430 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms