RNA–Protein interactions for RNA: ENST00000297784.9

TMC1-201, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMC1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-201ENST00000297784 ATXN2LQ8WWM7 1075 aaKnown RBP7.06□□□□□ -1.28
TMC1-201ENST00000297784 SYN2Q92777 582 aaPredicted RBP7.06□□□□□ -1.28
TMC1-201ENST00000297784 PSMB7Q99436 277 aa7.06□□□□□ -1.28
TMC1-201ENST00000297784 PAK6Q9NQU5 681 aaPredicted RBP7.06□□□□□ -1.28
TMC1-201ENST00000297784 GCNT4Q9P109 453 aa7.06□□□□□ -1.28
TMC1-201ENST00000297784 COQ4Q9Y3A0 265 aa7.06□□□□□ -1.28
TMC1-201ENST00000297784 TTC36A6NLP5 189 aa7.06□□□□□ -1.28
TMC1-201ENST00000297784 E7ENQ6 273 aa7.06□□□□□ -1.28
TMC1-201ENST00000297784 SART1O43290 800 aaKnown RBP7.06□□□□□ -1.28
TMC1-201ENST00000297784 C4BPAP04003 597 aaKnown RBP7.06□□□□□ -1.28
TMC1-201ENST00000297784 PHKA2P46019 1235 aa7.06□□□□□ -1.28
TMC1-201ENST00000297784 POLR2FP61218 127 aaKnown RBP7.06□□□□□ -1.28
TMC1-201ENST00000297784 LBRQ14739 615 aaKnown RBP7.06□□□□□ -1.28
TMC1-201ENST00000297784 PSMD6Q15008 389 aa7.06□□□□□ -1.28
TMC1-201ENST00000297784 TRADDQ15628 312 aa7.06□□□□□ -1.28
TMC1-201ENST00000297784 ENOX2Q16206 610 aaKnown RBP7.06□□□□□ -1.28
TMC1-201ENST00000297784 MPZL3Q6UWV2 235 aa7.06□□□□□ -1.28
TMC1-201ENST00000297784 SV2AQ7L0J3 742 aa7.06□□□□□ -1.28
TMC1-201ENST00000297784 GPIHBP1Q8IV16 184 aa7.06□□□□□ -1.28
TMC1-201ENST00000297784 GALNT15Q8N3T1 639 aa7.06□□□□□ -1.28
TMC1-201ENST00000297784 OLIG1Q8TAK6 271 aa7.06□□□□□ -1.28
TMC1-201ENST00000297784 ACTRT1Q8TDG2 376 aa7.06□□□□□ -1.28
TMC1-201ENST00000297784 TMC2Q8TDI7 906 aa7.06□□□□□ -1.28
TMC1-201ENST00000297784 DHX38Q92620 1227 aaKnown RBP7.06□□□□□ -1.28
TMC1-201ENST00000297784 PBKQ96KB5 322 aa7.06□□□□□ -1.28
TMC1-201ENST00000297784 LSM14BQ9BX40 385 aaKnown RBP7.06□□□□□ -1.28
TMC1-201ENST00000297784 TXLNGYQ9BZA5 131 aa7.06□□□□□ -1.28
TMC1-201ENST00000297784 UNC93B1Q9H1C4 597 aa7.06□□□□□ -1.28
TMC1-201ENST00000297784 CDT1Q9H211 546 aa7.06□□□□□ -1.28
TMC1-201ENST00000297784 HMX1Q9NP08 348 aaPredicted RBP7.06□□□□□ -1.28
TMC1-201ENST00000297784 LUC7LQ9NQ29 371 aaKnown RBP7.06□□□□□ -1.28
TMC1-201ENST00000297784 TRMT13Q9NUP7 481 aaKnown RBP7.06□□□□□ -1.28
TMC1-201ENST00000297784 PRMT7Q9NVM4 692 aaPredicted RBP7.06□□□□□ -1.28
TMC1-201ENST00000297784 CTNNAL1Q9UBT7 734 aa7.06□□□□□ -1.28
TMC1-201ENST00000297784 FBXL5Q9UKA1 691 aa7.06□□□□□ -1.28
TMC1-201ENST00000297784 GINS2Q9Y248 185 aa7.06□□□□□ -1.28
TMC1-201ENST00000297784 F8VZ95 297 aa7.06□□□□□ -1.28
TMC1-201ENST00000297784 VNN1O95497 513 aa7.06□□□□□ -1.28
TMC1-201ENST00000297784 OAS1P00973 400 aaKnown RBP7.06□□□□□ -1.28
TMC1-201ENST00000297784 RARAP10276 462 aa7.06□□□□□ -1.28
TMC1-201ENST00000297784 DLATP10515 647 aaKnown RBP7.06□□□□□ -1.28
TMC1-201ENST00000297784 DARSP14868 501 aaKnown RBP7.06□□□□□ -1.28
TMC1-201ENST00000297784 EIF4BP23588 611 aaKnown RBP7.06□□□□□ -1.28
TMC1-201ENST00000297784 MMP13P45452 471 aa7.06□□□□□ -1.28
TMC1-201ENST00000297784 PRMT2P55345 433 aa7.06□□□□□ -1.28
TMC1-201ENST00000297784 MGAT3Q09327 533 aa7.06□□□□□ -1.28
TMC1-201ENST00000297784 SNX17Q15036 470 aa7.06□□□□□ -1.28
TMC1-201ENST00000297784 ANKRD20A2Q5SQ80 823 aa7.06□□□□□ -1.28
TMC1-201ENST00000297784 THEMIS2Q5TEJ8 643 aa7.06□□□□□ -1.28
TMC1-201ENST00000297784 ANKRD20A1Q5TYW2 823 aa7.06□□□□□ -1.28
TMC1-201ENST00000297784 ANKRD20A3Q5VUR7 823 aa7.06□□□□□ -1.28
TMC1-201ENST00000297784 TDRD10Q5VZ19 366 aaKnown RBP7.06□□□□□ -1.28
TMC1-201ENST00000297784 PDXDC1Q6P996 788 aa7.06□□□□□ -1.28
TMC1-201ENST00000297784 TMC3Q7Z5M5 1100 aa7.06□□□□□ -1.28
TMC1-201ENST00000297784 TBC1D1Q86TI0 1168 aaPredicted RBP7.06□□□□□ -1.28
TMC1-201ENST00000297784 HOOK3Q86VS8 718 aa7.06□□□□□ -1.28
TMC1-201ENST00000297784 OR5B17Q8NGF7 314 aa7.06□□□□□ -1.28
TMC1-201ENST00000297784 OR2W6PQ8NHA6 318 aa7.06□□□□□ -1.28
TMC1-201ENST00000297784 PCMTD1Q96MG8 357 aaPredicted RBP7.06□□□□□ -1.28
TMC1-201ENST00000297784 YIPF3Q9GZM5 350 aa7.06□□□□□ -1.28
TMC1-201ENST00000297784 NSRP1Q9H0G5 558 aaKnown RBP7.06□□□□□ -1.28
TMC1-201ENST00000297784 NLRC4Q9NPP4 1024 aa7.06□□□□□ -1.28
TMC1-201ENST00000297784 ARHGEF3Q9NR81 526 aa7.06□□□□□ -1.28
TMC1-201ENST00000297784 RBAKQ9NYW8 714 aaPredicted RBP7.06□□□□□ -1.28
TMC1-201ENST00000297784 CEP72Q9P209 647 aa7.06□□□□□ -1.28
TMC1-201ENST00000297784 LRRC42Q9Y546 428 aa7.06□□□□□ -1.28
TMC1-201ENST00000297784 ASB3Q9Y575 518 aa7.06□□□□□ -1.28
TMC1-201ENST00000297784 RALGAPA2Q2PPJ7 1873 aa7.05□□□□□ -1.28
TMC1-201ENST00000297784 CCDC188H7C350 402 aa7.05□□□□□ -1.28
TMC1-201ENST00000297784 PDLIM1O00151 329 aa7.05□□□□□ -1.28
TMC1-201ENST00000297784 HARSP12081 509 aaKnown RBP7.05□□□□□ -1.28
TMC1-201ENST00000297784 ATP2A2P16615 1042 aaKnown RBP7.05□□□□□ -1.28
TMC1-201ENST00000297784 MNX1P50219 401 aaPredicted RBP7.05□□□□□ -1.28
TMC1-201ENST00000297784 OSTNP61366 133 aa7.05□□□□□ -1.28
TMC1-201ENST00000297784 MRPS35P82673 323 aaKnown RBP7.05□□□□□ -1.28
TMC1-201ENST00000297784 ENPEPQ07075 957 aa7.05□□□□□ -1.28
TMC1-201ENST00000297784 ITGA7Q13683 1181 aa7.05□□□□□ -1.28
TMC1-201ENST00000297784 HLTFQ14527 1009 aaKnown RBP eCLIP7.05□□□□□ -1.28
TMC1-201ENST00000297784 TBC1D25Q3MII6 688 aa7.05□□□□□ -1.28
TMC1-201ENST00000297784 RRAGAQ7L523 313 aa7.05□□□□□ -1.28
TMC1-201ENST00000297784 IRF2BP2Q7Z5L9 587 aa7.05□□□□□ -1.28
TMC1-201ENST00000297784 SLC43A3Q8NBI5 491 aa7.05□□□□□ -1.28
TMC1-201ENST00000297784 CXorf38Q8TB03 319 aa7.05□□□□□ -1.28
TMC1-201ENST00000297784 TAS1R2Q8TE23 839 aa7.05□□□□□ -1.28
TMC1-201ENST00000297784 PGM2Q96G03 612 aa7.05□□□□□ -1.28
TMC1-201ENST00000297784 EIF2AQ9BY44 585 aaKnown RBP7.05□□□□□ -1.28
TMC1-201ENST00000297784 SPC25Q9HBM1 224 aa7.05□□□□□ -1.28
TMC1-201ENST00000297784 KIAA1586Q9HCI6 787 aa7.05□□□□□ -1.28
TMC1-201ENST00000297784 PAPOLBQ9NRJ5 636 aaKnown RBP7.05□□□□□ -1.28
TMC1-201ENST00000297784 SAMD15Q9P1V8 674 aa7.05□□□□□ -1.28
TMC1-201ENST00000297784 AGAP1Q9UPQ3 857 aa7.05□□□□□ -1.28
TMC1-201ENST00000297784 A0A1W2PQ45 241 aaPredicted RBP7.05□□□□□ -1.28
TMC1-201ENST00000297784 A0A1W2PQY0 241 aa7.05□□□□□ -1.28
TMC1-201ENST00000297784 KIAA0391O15091 583 aaKnown RBP7.05□□□□□ -1.28
TMC1-201ENST00000297784 OGTO15294 1046 aa7.05□□□□□ -1.28
TMC1-201ENST00000297784 PPFIA2O75334 1257 aa7.05□□□□□ -1.28
TMC1-201ENST00000297784 PALMO75781 387 aa7.05□□□□□ -1.28
TMC1-201ENST00000297784 LDHAP00338 332 aaKnown RBP7.05□□□□□ -1.28
TMC1-201ENST00000297784 CST3P01034 146 aaPredicted RBP7.05□□□□□ -1.28
TMC1-201ENST00000297784 MYCP01106 439 aaPredicted RBP7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms