RNA–Protein interactions for RNA: ENST00000297689.3

NFIL3-201, Transcript of nuclear factor, interleukin 3 regulated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NFIL3, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIL3-201ENST00000297689 PRUNE1Q86TP1 453 aa20.89■□□□□ 0.93
NFIL3-201ENST00000297689 ALLCQ8N6M5 410 aa20.89■□□□□ 0.93
NFIL3-201ENST00000297689 MCEEQ96PE7 176 aa20.89■□□□□ 0.93
NFIL3-201ENST00000297689 FZD8Q9H461 694 aa20.89■□□□□ 0.93
NFIL3-201ENST00000297689 ANK1P16157 1881 aa20.88■□□□□ 0.93
NFIL3-201ENST00000297689 DNALI1O14645 258 aaPredicted RBP20.88■□□□□ 0.93
NFIL3-201ENST00000297689 TJP3O95049 919 aa20.88■□□□□ 0.93
NFIL3-201ENST00000297689 CETN2P41208 172 aa20.88■□□□□ 0.93
NFIL3-201ENST00000297689 PIGHQ14442 188 aaPredicted RBP20.88■□□□□ 0.93
NFIL3-201ENST00000297689 LDLRAD1Q5T700 205 aa20.88■□□□□ 0.93
NFIL3-201ENST00000297689 RNF149Q8NC42 400 aa20.88■□□□□ 0.93
NFIL3-201ENST00000297689 CCHCR1Q8TD31 782 aa20.88■□□□□ 0.93
NFIL3-201ENST00000297689 TCHPQ9BT92 498 aa20.88■□□□□ 0.93
NFIL3-201ENST00000297689 KLHL11Q9NVR0 708 aa20.88■□□□□ 0.93
NFIL3-201ENST00000297689 hCG_1818297A0A087WSY0 165 aa20.87■□□□□ 0.93
NFIL3-201ENST00000297689 GOLGA6L7A0A1B0GV03 622 aa20.87■□□□□ 0.93
NFIL3-201ENST00000297689 IQCA1LA6NCM1 817 aa20.87■□□□□ 0.93
NFIL3-201ENST00000297689 ITGBL1O95965 494 aaPredicted RBP20.87■□□□□ 0.93
NFIL3-201ENST00000297689 SRGAP2CP0DJJ0 459 aa20.87■□□□□ 0.93
NFIL3-201ENST00000297689 GJC1P36383 396 aa20.87■□□□□ 0.93
NFIL3-201ENST00000297689 CDKN2BP42772 138 aa20.87■□□□□ 0.93
NFIL3-201ENST00000297689 SCTRP47872 440 aa20.87■□□□□ 0.93
NFIL3-201ENST00000297689 STAT4Q14765 748 aa20.87■□□□□ 0.93
NFIL3-201ENST00000297689 P3H1Q32P28 736 aa20.87■□□□□ 0.93
NFIL3-201ENST00000297689 EAPPQ56P03 285 aaPredicted RBP20.87■□□□□ 0.93
NFIL3-201ENST00000297689 DNAJC24Q6P3W2 148 aa20.87■□□□□ 0.93
NFIL3-201ENST00000297689 NKD2Q969F2 451 aaPredicted RBP20.87■□□□□ 0.93
NFIL3-201ENST00000297689 C2orf40Q9H1Z8 148 aa20.87■□□□□ 0.93
NFIL3-201ENST00000297689 NAALADL1Q9UQQ1 740 aa20.87■□□□□ 0.93
NFIL3-201ENST00000297689 ACTL7BQ9Y614 415 aa20.87■□□□□ 0.93
NFIL3-201ENST00000297689 C3orf70A6NLC5 250 aaPredicted RBP20.87■□□□□ 0.93
NFIL3-201ENST00000297689 ACKR2O00590 384 aa20.87■□□□□ 0.93
NFIL3-201ENST00000297689 CDH16O75309 829 aa20.87■□□□□ 0.93
NFIL3-201ENST00000297689 SSR1P43307 286 aaKnown RBP20.87■□□□□ 0.93
NFIL3-201ENST00000297689 MAGEA4P43358 317 aa20.87■□□□□ 0.93
NFIL3-201ENST00000297689 WDR72Q3MJ13 1102 aa20.87■□□□□ 0.93
NFIL3-201ENST00000297689 CELF3Q5SZQ8 465 aaKnown RBP20.87■□□□□ 0.93
NFIL3-201ENST00000297689 MPZL3Q6UWV2 235 aa20.87■□□□□ 0.93
NFIL3-201ENST00000297689 TRIM50Q86XT4 487 aa20.87■□□□□ 0.93
NFIL3-201ENST00000297689 ZBTB8OSQ8IWT0 167 aa20.87■□□□□ 0.93
NFIL3-201ENST00000297689 EXOC8Q8IYI6 725 aa20.87■□□□□ 0.93
NFIL3-201ENST00000297689 MAML1Q92585 1016 aa20.87■□□□□ 0.93
NFIL3-201ENST00000297689 MGAMO43451 1857 aa20.87■□□□□ 0.93
NFIL3-201ENST00000297689 FOXO6A8MYZ6 492 aa20.86■□□□□ 0.93
NFIL3-201ENST00000297689 H0YHG0 523 aa20.86■□□□□ 0.93
NFIL3-201ENST00000297689 SNX3O60493 162 aa20.86■□□□□ 0.93
NFIL3-201ENST00000297689 KRT1P04264 644 aa20.86■□□□□ 0.93
NFIL3-201ENST00000297689 WEE2P0C1S8 567 aa20.86■□□□□ 0.93
NFIL3-201ENST00000297689 OSBPP22059 807 aa20.86■□□□□ 0.93
NFIL3-201ENST00000297689 IFNAR2P48551 515 aa20.86■□□□□ 0.93
NFIL3-201ENST00000297689 ZNF394Q53GI3 561 aa20.86■□□□□ 0.93
NFIL3-201ENST00000297689 FASTKD5Q7L8L6 764 aaKnown RBP20.86■□□□□ 0.93
NFIL3-201ENST00000297689 POLNQ7Z5Q5 900 aa20.86■□□□□ 0.93
NFIL3-201ENST00000297689 LRRC71Q8N4P6 559 aa20.86■□□□□ 0.93
NFIL3-201ENST00000297689 CKAP2Q8WWK9 683 aa20.86■□□□□ 0.93
NFIL3-201ENST00000297689 C9orf72Q96LT7 481 aa20.86■□□□□ 0.93
NFIL3-201ENST00000297689 RBM15Q96T37 977 aaKnown RBP eCLIP20.86■□□□□ 0.931e-7■■■■□ 23.5
NFIL3-201ENST00000297689 LHX5Q9H2C1 402 aa20.86■□□□□ 0.93
NFIL3-201ENST00000297689 DDX56Q9NY93 547 aaKnown RBP20.86■□□□□ 0.93
NFIL3-201ENST00000297689 MCM3APO60318 1980 aa20.86■□□□□ 0.93
NFIL3-201ENST00000297689 XRCC4Q13426 336 aa20.85■□□□□ 0.93
NFIL3-201ENST00000297689 TFDP3Q5H9I0 405 aa20.85■□□□□ 0.93
NFIL3-201ENST00000297689 CCDC62Q6P9F0 684 aa20.85■□□□□ 0.93
NFIL3-201ENST00000297689 CEP128Q6ZU80 1094 aa20.85■□□□□ 0.93
NFIL3-201ENST00000297689 ARFGAP1Q8N6T3 406 aa20.85■□□□□ 0.93
NFIL3-201ENST00000297689 ANKS4BQ8N8V4 417 aa20.85■□□□□ 0.93
NFIL3-201ENST00000297689 MMP19Q99542 508 aa20.85■□□□□ 0.93
NFIL3-201ENST00000297689 ELAC2Q9BQ52 826 aaKnown RBP20.85■□□□□ 0.93
NFIL3-201ENST00000297689 EFR3BQ9Y2G0 817 aa20.85■□□□□ 0.93
NFIL3-201ENST00000297689 GCAP28676 217 aa20.85■□□□□ 0.93
NFIL3-201ENST00000297689 VCPP55072 806 aaKnown RBP20.85■□□□□ 0.93
NFIL3-201ENST00000297689 GSCP56915 257 aaPredicted RBP20.85■□□□□ 0.93
NFIL3-201ENST00000297689 TAZQ16635 292 aa20.85■□□□□ 0.93
NFIL3-201ENST00000297689 ICE2Q659A1 982 aa20.85■□□□□ 0.93
NFIL3-201ENST00000297689 DCUN1D2Q6PH85 259 aa20.85■□□□□ 0.93
NFIL3-201ENST00000297689 ERICH1Q86X53 443 aa20.85■□□□□ 0.93
NFIL3-201ENST00000297689 SLC35B2Q8TB61 432 aa20.85■□□□□ 0.93
NFIL3-201ENST00000297689 BCO2Q9BYV7 579 aa20.85■□□□□ 0.93
NFIL3-201ENST00000297689 SLC40A1Q9NP59 571 aa20.85■□□□□ 0.93
NFIL3-201ENST00000297689 CYTH4Q9UIA0 394 aa20.85■□□□□ 0.93
NFIL3-201ENST00000297689 DNAJC8O75937 253 aaPredicted RBP20.84■□□□□ 0.93
NFIL3-201ENST00000297689 ITGAVP06756 1048 aa20.84■□□□□ 0.93
NFIL3-201ENST00000297689 VIMP08670 466 aaKnown RBP20.84■□□□□ 0.93
NFIL3-201ENST00000297689 ZSCAN5DPP0CG00 497 aa20.84■□□□□ 0.93
NFIL3-201ENST00000297689 MARK3P27448 753 aa20.84■□□□□ 0.93
NFIL3-201ENST00000297689 TFAMQ00059 246 aaKnown RBP20.84■□□□□ 0.93
NFIL3-201ENST00000297689 TRPC3Q13507 836 aa20.84■□□□□ 0.93
NFIL3-201ENST00000297689 ZNF699Q32M78 642 aa20.84■□□□□ 0.93
NFIL3-201ENST00000297689 PTPN20Q4JDL3 420 aa20.84■□□□□ 0.93
NFIL3-201ENST00000297689 EEF1DP3Q658K8 133 aa20.84■□□□□ 0.93
NFIL3-201ENST00000297689 KAZNQ674X7 775 aa20.84■□□□□ 0.93
NFIL3-201ENST00000297689 GSTA5Q7RTV2 222 aa20.84■□□□□ 0.93
NFIL3-201ENST00000297689 TDRPQ86YL5 185 aa20.84■□□□□ 0.93
NFIL3-201ENST00000297689 RIBC1Q8N443 379 aaPredicted RBP20.84■□□□□ 0.93
NFIL3-201ENST00000297689 FNIP1Q8TF40 1166 aa20.84■□□□□ 0.93
NFIL3-201ENST00000297689 FAXDC2Q96IV6 333 aa20.84■□□□□ 0.93
NFIL3-201ENST00000297689 SAMD15Q9P1V8 674 aa20.84■□□□□ 0.93
NFIL3-201ENST00000297689 SIX4Q9UIU6 781 aa20.84■□□□□ 0.93
NFIL3-201ENST00000297689 SIGLEC16A6NMB1 481 aa20.84■□□□□ 0.93
NFIL3-201ENST00000297689 BRAFP15056 766 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms