RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 WDR72Q3MJ13 1102 aa9.71□□□□□ -0.86
PDPN-201ENST00000294489 TTC39CQ8N584 583 aa9.71□□□□□ -0.86
PDPN-201ENST00000294489 LRRC52Q8N7C0 313 aa9.71□□□□□ -0.86
PDPN-201ENST00000294489 LHX5Q9H2C1 402 aa9.71□□□□□ -0.86
PDPN-201ENST00000294489 FAM114A2Q9NRY5 505 aa9.71□□□□□ -0.86
PDPN-201ENST00000294489 PARVAQ9NVD7 372 aa9.71□□□□□ -0.86
PDPN-201ENST00000294489 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.71□□□□□ -0.86
PDPN-201ENST00000294489 RASAL2Q9UJF2 1139 aa9.71□□□□□ -0.86
PDPN-201ENST00000294489 CDY2AQ9Y6F7 541 aa9.71□□□□□ -0.86
PDPN-201ENST00000294489 TCRBV5S1A1TA0A578 114 aa9.7□□□□□ -0.86
PDPN-201ENST00000294489 TTI1O43156 1089 aa9.7□□□□□ -0.86
PDPN-201ENST00000294489 CILPO75339 1184 aa9.7□□□□□ -0.86
PDPN-201ENST00000294489 CALB1P05937 261 aa9.7□□□□□ -0.86
PDPN-201ENST00000294489 RAD23BP54727 409 aa9.7□□□□□ -0.86
PDPN-201ENST00000294489 C2CD6Q53TS8 623 aa9.7□□□□□ -0.86
PDPN-201ENST00000294489 LHX8Q68G74 356 aa9.7□□□□□ -0.86
PDPN-201ENST00000294489 MMS22LQ6ZRQ5 1243 aa9.7□□□□□ -0.86
PDPN-201ENST00000294489 PHLDB2Q86SQ0 1253 aa9.7□□□□□ -0.86
PDPN-201ENST00000294489 RSPH3Q86UC2 560 aa9.7□□□□□ -0.86
PDPN-201ENST00000294489 HPDLQ96IR7 371 aa9.7□□□□□ -0.86
PDPN-201ENST00000294489 RUNDC3BQ96NL0 473 aa9.7□□□□□ -0.86
PDPN-201ENST00000294489 NXF3Q9H4D5 531 aaKnown RBP9.7□□□□□ -0.86
PDPN-201ENST00000294489 NR2E1Q9Y466 385 aa9.7□□□□□ -0.86
PDPN-201ENST00000294489 FAM187AA6NFU0 413 aa9.7□□□□□ -0.86
PDPN-201ENST00000294489 PIRO00625 290 aa9.7□□□□□ -0.86
PDPN-201ENST00000294489 MED7O43513 233 aa9.7□□□□□ -0.86
PDPN-201ENST00000294489 PHF2O75151 1096 aa9.7□□□□□ -0.86
PDPN-201ENST00000294489 CAND2O75155 1236 aa9.7□□□□□ -0.86
PDPN-201ENST00000294489 PROSCO94903 275 aa9.7□□□□□ -0.86
PDPN-201ENST00000294489 MMP8P22894 467 aa9.7□□□□□ -0.86
PDPN-201ENST00000294489 POLR2BP30876 1174 aaKnown RBP9.7□□□□□ -0.86
PDPN-201ENST00000294489 SSTR3P32745 418 aaPredicted RBP9.7□□□□□ -0.86
PDPN-201ENST00000294489 GGCXP38435 758 aa9.7□□□□□ -0.86
PDPN-201ENST00000294489 GUCY2FP51841 1108 aa9.7□□□□□ -0.86
PDPN-201ENST00000294489 GSCP56915 257 aaPredicted RBP9.7□□□□□ -0.86
PDPN-201ENST00000294489 PTK7Q13308 1070 aa9.7□□□□□ -0.86
PDPN-201ENST00000294489 MAMLD1Q13495 774 aa9.7□□□□□ -0.86
PDPN-201ENST00000294489 PLEKHA7Q6IQ23 1121 aa9.7□□□□□ -0.86
PDPN-201ENST00000294489 SLC13A5Q86YT5 568 aaPredicted RBP9.7□□□□□ -0.86
PDPN-201ENST00000294489 TMEM130Q8N3G9 435 aa9.7□□□□□ -0.86
PDPN-201ENST00000294489 ZNF784Q8NCA9 323 aaPredicted RBP9.7□□□□□ -0.86
PDPN-201ENST00000294489 ZBTB9Q96C00 473 aa9.7□□□□□ -0.86
PDPN-201ENST00000294489 KIF12Q96FN5 646 aa9.7□□□□□ -0.86
PDPN-201ENST00000294489 LCMT1Q9UIC8 334 aa9.7□□□□□ -0.86
PDPN-201ENST00000294489 GINS2Q9Y248 185 aa9.7□□□□□ -0.86
PDPN-201ENST00000294489 SQORQ9Y6N5 450 aa9.7□□□□□ -0.86
PDPN-201ENST00000294489 MOXD2PA6NHM9 499 aa9.69□□□□□ -0.86
PDPN-201ENST00000294489 TLR3O15455 904 aaKnown RBP9.69□□□□□ -0.86
PDPN-201ENST00000294489 OPA1O60313 960 aa9.69□□□□□ -0.86
PDPN-201ENST00000294489 RECQL4O94761 1208 aa9.69□□□□□ -0.86
PDPN-201ENST00000294489 YARSP54577 528 aaKnown RBP9.69□□□□□ -0.86
PDPN-201ENST00000294489 AADACL2Q6P093 401 aa9.69□□□□□ -0.86
PDPN-201ENST00000294489 MRPL10Q7Z7H8 261 aaKnown RBP9.69□□□□□ -0.86
PDPN-201ENST00000294489 MREGQ8N565 214 aa9.69□□□□□ -0.86
PDPN-201ENST00000294489 WDTC1Q8N5D0 677 aa9.69□□□□□ -0.86
PDPN-201ENST00000294489 SLC4A11Q8NBS3 891 aa9.69□□□□□ -0.86
PDPN-201ENST00000294489 SLAIN1Q8ND83 568 aa9.69□□□□□ -0.86
PDPN-201ENST00000294489 MAIP1Q8WWC4 291 aa9.69□□□□□ -0.86
PDPN-201ENST00000294489 TFAP2BQ92481 460 aa9.69□□□□□ -0.86
PDPN-201ENST00000294489 MAGOHBQ96A72 148 aaKnown RBP9.69□□□□□ -0.86
PDPN-201ENST00000294489 ERVK-5Q9HDB9 667 aa9.69□□□□□ -0.86
PDPN-201ENST00000294489 PIN4Q9Y237 131 aaKnown RBP9.69□□□□□ -0.86
PDPN-201ENST00000294489 FAN1Q9Y2M0 1017 aa9.69□□□□□ -0.86
PDPN-201ENST00000294489 IPPQ9Y573 584 aa9.69□□□□□ -0.86
PDPN-201ENST00000294489 RNF40O75150 1001 aa9.69□□□□□ -0.86
PDPN-201ENST00000294489 SYF2O95926 243 aaKnown RBP9.69□□□□□ -0.86
PDPN-201ENST00000294489 FAM153BP0C7A2 387 aa9.69□□□□□ -0.86
PDPN-201ENST00000294489 CD19P15391 556 aa9.69□□□□□ -0.86
PDPN-201ENST00000294489 DSC3Q14574 896 aa9.69□□□□□ -0.86
PDPN-201ENST00000294489 TRADDQ15628 312 aa9.69□□□□□ -0.86
PDPN-201ENST00000294489 FAM153CQ494X1 144 aa9.69□□□□□ -0.86
PDPN-201ENST00000294489 CFAP58Q5T655 872 aa9.69□□□□□ -0.86
PDPN-201ENST00000294489 CPNE8Q86YQ8 564 aa9.69□□□□□ -0.86
PDPN-201ENST00000294489 FEZF2Q8TBJ5 459 aa9.69□□□□□ -0.86
PDPN-201ENST00000294489 SEC14L1Q92503 715 aa9.69□□□□□ -0.86
PDPN-201ENST00000294489 LRRC45Q96CN5 670 aa9.69□□□□□ -0.86
PDPN-201ENST00000294489 TRIM7Q9C029 511 aa9.69□□□□□ -0.86
PDPN-201ENST00000294489 SMYD3Q9H7B4 428 aa9.69□□□□□ -0.86
PDPN-201ENST00000294489 FAM153AQ9UHL3 310 aa9.69□□□□□ -0.86
PDPN-201ENST00000294489 ADAM21Q9UKJ8 722 aa9.69□□□□□ -0.86
PDPN-201ENST00000294489 AGAP1Q9UPQ3 857 aa9.69□□□□□ -0.86
PDPN-201ENST00000294489 TSC2P49815 1807 aa9.69□□□□□ -0.86
PDPN-201ENST00000294489 SMIM28A0A1B0GU29 152 aa9.69□□□□□ -0.86
PDPN-201ENST00000294489 BHMG1C9JSJ3 638 aaPredicted RBP9.69□□□□□ -0.86
PDPN-201ENST00000294489 DAPK3O43293 454 aa9.69□□□□□ -0.86
PDPN-201ENST00000294489 FKTNO75072 461 aa9.69□□□□□ -0.86
PDPN-201ENST00000294489 ACLYP53396 1101 aa9.69□□□□□ -0.86
PDPN-201ENST00000294489 C9orf57Q5W0N0 161 aa9.69□□□□□ -0.86
PDPN-201ENST00000294489 RNF180Q86T96 592 aa9.69□□□□□ -0.86
PDPN-201ENST00000294489 ERICH1Q86X53 443 aa9.69□□□□□ -0.86
PDPN-201ENST00000294489 RHOT1Q8IXI2 618 aa9.69□□□□□ -0.86
PDPN-201ENST00000294489 PRELID2Q8N945 189 aa9.69□□□□□ -0.86
PDPN-201ENST00000294489 C1orf131Q8NDD1 294 aaKnown RBP9.69□□□□□ -0.86
PDPN-201ENST00000294489 BEST2Q8NFU1 509 aa9.69□□□□□ -0.86
PDPN-201ENST00000294489 GDAP2Q9NXN4 497 aa9.69□□□□□ -0.86
PDPN-201ENST00000294489 IP6K2Q9UHH9 426 aa9.69□□□□□ -0.86
PDPN-201ENST00000294489 UBQLN1Q9UMX0 589 aaKnown RBP9.69□□□□□ -0.86
PDPN-201ENST00000294489 M0QZ92 97 aa9.68□□□□□ -0.86
PDPN-201ENST00000294489 AGPSO00116 658 aa9.68□□□□□ -0.86
PDPN-201ENST00000294489 PODXLO00592 558 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms