RNA–Protein interactions for RNA: ENST00000293406.7

LSM12-201, Transcript of LSM12 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM12, Length 2,308 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12-201ENST00000293406 HIF1AQ16665 826 aa20.21■□□□□ 0.83
LSM12-201ENST00000293406 XRRA1Q6P2D8 792 aa20.21■□□□□ 0.83
LSM12-201ENST00000293406 DNAJC24Q6P3W2 148 aa20.21■□□□□ 0.83
LSM12-201ENST00000293406 DCUN1D2Q6PH85 259 aa20.21■□□□□ 0.83
LSM12-201ENST00000293406 NKD2Q969F2 451 aaPredicted RBP20.21■□□□□ 0.83
LSM12-201ENST00000293406 CYP39A1Q9NYL5 469 aa20.21■□□□□ 0.83
LSM12-201ENST00000293406 BANF1O75531 89 aa20.2■□□□□ 0.82
LSM12-201ENST00000293406 LUC7L3O95232 432 aaKnown RBP20.2■□□□□ 0.82
LSM12-201ENST00000293406 CBX6O95503 412 aa20.2■□□□□ 0.82
LSM12-201ENST00000293406 CALB1P05937 261 aa20.2■□□□□ 0.82
LSM12-201ENST00000293406 NR3C2P08235 984 aa20.2■□□□□ 0.82
LSM12-201ENST00000293406 GNAZP19086 355 aa20.2■□□□□ 0.82
LSM12-201ENST00000293406 BAATQ14032 418 aaPredicted RBP20.2■□□□□ 0.82
LSM12-201ENST00000293406 TAF1BQ53T94 588 aaPredicted RBP20.2■□□□□ 0.82
LSM12-201ENST00000293406 EFHC2Q5JST6 749 aa20.2■□□□□ 0.82
LSM12-201ENST00000293406 FYB2Q5VWT5 728 aa20.2■□□□□ 0.82
LSM12-201ENST00000293406 TXNRD3NBQ6F5E7 133 aa20.2■□□□□ 0.82
LSM12-201ENST00000293406 CCDC125Q86Z20 511 aa20.2■□□□□ 0.82
LSM12-201ENST00000293406 CCDC60Q8IWA6 550 aaPredicted RBP20.2■□□□□ 0.82
LSM12-201ENST00000293406 ZBTB45Q96K62 511 aaPredicted RBP20.2■□□□□ 0.82
LSM12-201ENST00000293406 HAPLN2Q9GZV7 340 aa20.2■□□□□ 0.82
LSM12-201ENST00000293406 TELO2Q9Y4R8 837 aa20.2■□□□□ 0.82
LSM12-201ENST00000293406 LRRD1A4D1F6 860 aa20.2■□□□□ 0.82
LSM12-201ENST00000293406 MAFGO15525 162 aa20.2■□□□□ 0.82
LSM12-201ENST00000293406 SKAP2O75563 359 aaPredicted RBP20.2■□□□□ 0.82
LSM12-201ENST00000293406 FGFR1P11362 822 aa20.2■□□□□ 0.82
LSM12-201ENST00000293406 KCNA2P16389 499 aa20.2■□□□□ 0.82
LSM12-201ENST00000293406 EPHB2P29323 1055 aa20.2■□□□□ 0.82
LSM12-201ENST00000293406 PTPN7P35236 360 aa20.2■□□□□ 0.82
LSM12-201ENST00000293406 RNASELQ05823 741 aaKnown RBP20.2■□□□□ 0.82
LSM12-201ENST00000293406 SEPT7Q16181 437 aaKnown RBP20.2■□□□□ 0.82
LSM12-201ENST00000293406 MTERF2Q49AM1 385 aa20.2■□□□□ 0.82
LSM12-201ENST00000293406 NLRP9Q7RTR0 991 aa20.2■□□□□ 0.82
LSM12-201ENST00000293406 STK32AQ8WU08 396 aa20.2■□□□□ 0.82
LSM12-201ENST00000293406 SSU72Q9NP77 194 aaKnown RBP20.2■□□□□ 0.82
LSM12-201ENST00000293406 CYLDQ9NQC7 956 aa20.2■□□□□ 0.82
LSM12-201ENST00000293406 ZFP69BQ9UJL9 534 aa20.2■□□□□ 0.82
LSM12-201ENST00000293406 PHBP35232 272 aa20.19■□□□□ 0.82
LSM12-201ENST00000293406 CDKN2BP42772 138 aa20.19■□□□□ 0.82
LSM12-201ENST00000293406 PSEN1P49768 467 aa20.19■□□□□ 0.82
LSM12-201ENST00000293406 GPX6P59796 221 aa20.19■□□□□ 0.82
LSM12-201ENST00000293406 MAP3K10Q02779 954 aa20.19■□□□□ 0.82
LSM12-201ENST00000293406 SLC45A4Q5BKX6 768 aa20.19■□□□□ 0.82
LSM12-201ENST00000293406 SPDYAQ5MJ70 313 aa20.19■□□□□ 0.82
LSM12-201ENST00000293406 ZBTB41Q5SVQ8 909 aa20.19■□□□□ 0.82
LSM12-201ENST00000293406 MICAL1Q8TDZ2 1067 aa20.19■□□□□ 0.82
LSM12-201ENST00000293406 NAF1Q96HR8 494 aaKnown RBP20.19■□□□□ 0.82
LSM12-201ENST00000293406 CGRRF1Q99675 332 aa20.19■□□□□ 0.82
LSM12-201ENST00000293406 MSTO1Q9BUK6 570 aa20.19■□□□□ 0.82
LSM12-201ENST00000293406 JPH1Q9HDC5 661 aaPredicted RBP20.19■□□□□ 0.82
LSM12-201ENST00000293406 NPHS2Q9NP85 383 aa20.19■□□□□ 0.82
LSM12-201ENST00000293406 DDX56Q9NY93 547 aaKnown RBP20.19■□□□□ 0.82
LSM12-201ENST00000293406 KCNG1Q9UIX4 513 aa20.19■□□□□ 0.82
LSM12-201ENST00000293406 RABGEF1Q9UJ41 708 aa20.19■□□□□ 0.82
LSM12-201ENST00000293406 E7ENQ6 273 aa20.19■□□□□ 0.82
LSM12-201ENST00000293406 C2CD2LO14523 706 aa20.19■□□□□ 0.82
LSM12-201ENST00000293406 GLRA2P23416 452 aa20.19■□□□□ 0.82
LSM12-201ENST00000293406 OGDHQ02218 1023 aa20.19■□□□□ 0.82
LSM12-201ENST00000293406 NCOA4Q13772 614 aa20.19■□□□□ 0.82
LSM12-201ENST00000293406 SLFN12LQ6IEE8 588 aa20.19■□□□□ 0.82
LSM12-201ENST00000293406 PCGF5Q86SE9 256 aa20.19■□□□□ 0.82
LSM12-201ENST00000293406 OR5B17Q8NGF7 314 aa20.19■□□□□ 0.82
LSM12-201ENST00000293406 PYROXD1Q8WU10 500 aa20.19■□□□□ 0.82
LSM12-201ENST00000293406 SPDL1Q96EA4 605 aa20.19■□□□□ 0.82
LSM12-201ENST00000293406 NUDCD1Q96RS6 583 aa20.19■□□□□ 0.82
LSM12-201ENST00000293406 ANKFY1Q9P2R3 1169 aa20.19■□□□□ 0.82
LSM12-201ENST00000293406 PGAP2Q9UHJ9 254 aa20.19■□□□□ 0.82
LSM12-201ENST00000293406 ARID2Q68CP9 1835 aa20.18■□□□□ 0.82
LSM12-201ENST00000293406 TRAFD1O14545 582 aaPredicted RBP20.18■□□□□ 0.82
LSM12-201ENST00000293406 SMNDC1O75940 238 aaKnown RBP eCLIP20.18■□□□□ 0.82
LSM12-201ENST00000293406 LDHAP00338 332 aaKnown RBP20.18■□□□□ 0.82
LSM12-201ENST00000293406 TPBGLP0DKB5 382 aa20.18■□□□□ 0.82
LSM12-201ENST00000293406 GM2AP17900 193 aa20.18■□□□□ 0.82
LSM12-201ENST00000293406 ZNF132P52740 706 aa20.18■□□□□ 0.82
LSM12-201ENST00000293406 RAD23BP54727 409 aa20.18■□□□□ 0.82
LSM12-201ENST00000293406 TFDP1Q14186 410 aa20.18■□□□□ 0.82
LSM12-201ENST00000293406 PIGHQ14442 188 aaPredicted RBP20.18■□□□□ 0.82
LSM12-201ENST00000293406 EMC2Q15006 297 aa20.18■□□□□ 0.82
LSM12-201ENST00000293406 EFTUD2Q15029 972 aaKnown RBP eCLIP20.18■□□□□ 0.823e-6■■■■■ 38.6
LSM12-201ENST00000293406 MAPK6Q16659 721 aa20.18■□□□□ 0.82
LSM12-201ENST00000293406 TMEM143Q96AN5 459 aa20.18■□□□□ 0.82
LSM12-201ENST00000293406 IMPG2Q9BZV3 1241 aa20.18■□□□□ 0.82
LSM12-201ENST00000293406 FARP1Q9Y4F1 1045 aaPredicted RBP20.18■□□□□ 0.82
LSM12-201ENST00000293406 CLUHO75153 1309 aa20.18■□□□□ 0.82
LSM12-201ENST00000293406 LIN7AO14910 233 aaPredicted RBP20.18■□□□□ 0.82
LSM12-201ENST00000293406 TROVE2P10155 538 aaKnown RBP eCLIP20.18■□□□□ 0.82
LSM12-201ENST00000293406 SSTR1P30872 391 aa20.18■□□□□ 0.82
LSM12-201ENST00000293406 CTCFP49711 727 aaPredicted RBP20.18■□□□□ 0.82
LSM12-201ENST00000293406 WASHC2DQ5SRD0 308 aa20.18■□□□□ 0.82
LSM12-201ENST00000293406 ATP11CQ8NB49 1132 aa20.18■□□□□ 0.82
LSM12-201ENST00000293406 SLC35B2Q8TB61 432 aa20.18■□□□□ 0.82
LSM12-201ENST00000293406 RNF146Q9NTX7 359 aa20.18■□□□□ 0.82
LSM12-201ENST00000293406 SLC9A2Q9UBY0 812 aa20.18■□□□□ 0.82
LSM12-201ENST00000293406 FETUBQ9UGM5 382 aa20.18■□□□□ 0.82
LSM12-201ENST00000293406 TCRBV5S1A1TA0A578 114 aa20.17■□□□□ 0.82
LSM12-201ENST00000293406 WDR91A4D1P6 747 aa20.17■□□□□ 0.82
LSM12-201ENST00000293406 LRRIQ4A6NIV6 560 aa20.17■□□□□ 0.82
LSM12-201ENST00000293406 K7ERI5 159 aa20.17■□□□□ 0.82
LSM12-201ENST00000293406 ADRA1DP25100 572 aa20.17■□□□□ 0.82
LSM12-201ENST00000293406 ARL4CP56559 192 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms