RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 LRRC71Q8N4P6 559 aa13.36□□□□□ -0.27
PTCD1-201ENST00000292478 RAET1EQ8TD07 263 aa13.36□□□□□ -0.27
PTCD1-201ENST00000292478 CYFIP2Q96F07 1278 aa13.36□□□□□ -0.27
PTCD1-201ENST00000292478 ELMO2Q96JJ3 720 aa13.36□□□□□ -0.27
PTCD1-201ENST00000292478 MRPL1Q9BYD6 325 aaKnown RBP13.36□□□□□ -0.27
PTCD1-201ENST00000292478 CELF4Q9BZC1 486 aaKnown RBP13.36□□□□□ -0.27
PTCD1-201ENST00000292478 NPHS2Q9NP85 383 aa13.36□□□□□ -0.27
PTCD1-201ENST00000292478 DPP3Q9NY33 737 aa13.36□□□□□ -0.27
PTCD1-201ENST00000292478 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.36□□□□□ -0.27
PTCD1-201ENST00000292478 ZC3H4Q9UPT8 1303 aaKnown RBP13.36□□□□□ -0.27
PTCD1-201ENST00000292478 C6orf222P0C671 652 aaPredicted RBP13.36□□□□□ -0.27
PTCD1-201ENST00000292478 SLC2A3P11169 496 aa13.36□□□□□ -0.27
PTCD1-201ENST00000292478 HDAC4P56524 1084 aa13.36□□□□□ -0.27
PTCD1-201ENST00000292478 AGAP3Q96P47 875 aa13.36□□□□□ -0.27
PTCD1-201ENST00000292478 PI4K2AQ9BTU6 479 aa13.36□□□□□ -0.27
PTCD1-201ENST00000292478 DYRK4Q9NR20 520 aa13.36□□□□□ -0.27
PTCD1-201ENST00000292478 SMARCAL1Q9NZC9 954 aa13.36□□□□□ -0.27
PTCD1-201ENST00000292478 ADGRB2O60241 1585 aa13.35□□□□□ -0.27
PTCD1-201ENST00000292478 PHF20L1A8MW92 1017 aa13.35□□□□□ -0.27
PTCD1-201ENST00000292478 ATMINO43313 823 aaPredicted RBP13.35□□□□□ -0.27
PTCD1-201ENST00000292478 ALDH1A1P00352 501 aa13.35□□□□□ -0.27
PTCD1-201ENST00000292478 HIST1H2AGP0C0S8 130 aaPredicted RBP13.35□□□□□ -0.27
PTCD1-201ENST00000292478 HIST1H2ADP20671 130 aa13.35□□□□□ -0.27
PTCD1-201ENST00000292478 HMOX2P30519 316 aa13.35□□□□□ -0.27
PTCD1-201ENST00000292478 SLC15A2Q16348 729 aa13.35□□□□□ -0.27
PTCD1-201ENST00000292478 ZBTB41Q5SVQ8 909 aa13.35□□□□□ -0.27
PTCD1-201ENST00000292478 BTNL9Q6UXG8 535 aa13.35□□□□□ -0.27
PTCD1-201ENST00000292478 SLC7A14Q8TBB6 771 aa13.35□□□□□ -0.27
PTCD1-201ENST00000292478 HIST1H2AHQ96KK5 128 aa13.35□□□□□ -0.27
PTCD1-201ENST00000292478 HIST1H2AJQ99878 128 aa13.35□□□□□ -0.27
PTCD1-201ENST00000292478 H2AFJQ9BTM1 129 aa13.35□□□□□ -0.27
PTCD1-201ENST00000292478 MROH8Q9H579 483 aa13.35□□□□□ -0.27
PTCD1-201ENST00000292478 KBTBD13C9JR72 458 aa13.35□□□□□ -0.27
PTCD1-201ENST00000292478 NDUFS3O75489 264 aa13.35□□□□□ -0.27
PTCD1-201ENST00000292478 ANXA9O76027 345 aa13.35□□□□□ -0.27
PTCD1-201ENST00000292478 NPTXRO95502 500 aa13.35□□□□□ -0.27
PTCD1-201ENST00000292478 ENO1P06733 434 aaKnown RBP13.35□□□□□ -0.27
PTCD1-201ENST00000292478 BACE1P56817 501 aa13.35□□□□□ -0.27
PTCD1-201ENST00000292478 SLC29A2Q14542 456 aa13.35□□□□□ -0.27
PTCD1-201ENST00000292478 NIPA1Q7RTP0 329 aa13.35□□□□□ -0.27
PTCD1-201ENST00000292478 HOMEZQ8IX15 550 aa13.35□□□□□ -0.27
PTCD1-201ENST00000292478 PCYOX1LQ8NBM8 494 aa13.35□□□□□ -0.27
PTCD1-201ENST00000292478 C1orf131Q8NDD1 294 aaKnown RBP13.35□□□□□ -0.27
PTCD1-201ENST00000292478 TFB1MQ8WVM0 346 aaKnown RBP13.35□□□□□ -0.27
PTCD1-201ENST00000292478 CASKIN2Q8WXE0 1202 aa13.35□□□□□ -0.27
PTCD1-201ENST00000292478 C20orf96Q9NUD7 363 aaPredicted RBP13.35□□□□□ -0.27
PTCD1-201ENST00000292478 PCMTD2Q9NV79 361 aa13.35□□□□□ -0.27
PTCD1-201ENST00000292478 KIF17Q9P2E2 1029 aa13.35□□□□□ -0.27
PTCD1-201ENST00000292478 FAM205AQ6ZU69 1335 aa13.35□□□□□ -0.27
PTCD1-201ENST00000292478 CCT8L1PA6NM43 557 aa13.35□□□□□ -0.27
PTCD1-201ENST00000292478 ITGB3P05106 788 aa13.35□□□□□ -0.27
PTCD1-201ENST00000292478 CYP11B1P15538 503 aa13.35□□□□□ -0.27
PTCD1-201ENST00000292478 ATICP31939 592 aa13.35□□□□□ -0.27
PTCD1-201ENST00000292478 NPTX2P47972 431 aa13.35□□□□□ -0.27
PTCD1-201ENST00000292478 OR2W6PQ8NHA6 318 aa13.35□□□□□ -0.27
PTCD1-201ENST00000292478 KCNV2Q8TDN2 545 aa13.35□□□□□ -0.27
PTCD1-201ENST00000292478 TASP1Q9H6P5 420 aa13.35□□□□□ -0.27
PTCD1-201ENST00000292478 MANSC1Q9H8J5 431 aa13.35□□□□□ -0.27
PTCD1-201ENST00000292478 PIDD1Q9HB75 910 aa13.35□□□□□ -0.27
PTCD1-201ENST00000292478 FAM49BQ9NUQ9 324 aa13.35□□□□□ -0.27
PTCD1-201ENST00000292478 SGPL1O95470 568 aa13.35□□□□□ -0.27
PTCD1-201ENST00000292478 CCND1P24385 295 aa13.35□□□□□ -0.27
PTCD1-201ENST00000292478 LRRC23Q53EV4 343 aaPredicted RBP13.35□□□□□ -0.27
PTCD1-201ENST00000292478 LONP2Q86WA8 852 aa13.35□□□□□ -0.27
PTCD1-201ENST00000292478 OR9Q1Q8NGQ5 310 aa13.35□□□□□ -0.27
PTCD1-201ENST00000292478 CYP3A43Q9HB55 503 aa13.35□□□□□ -0.27
PTCD1-201ENST00000292478 ALG13Q9NP73 1137 aaKnown RBP13.35□□□□□ -0.27
PTCD1-201ENST00000292478 SYNPO2Q9UMS6 1093 aa13.35□□□□□ -0.27
PTCD1-201ENST00000292478 VPS9D1Q9Y2B5 631 aa13.35□□□□□ -0.27
PTCD1-201ENST00000292478 CCL15-CCL14A0A0B4J2E2 113 aa13.34□□□□□ -0.27
PTCD1-201ENST00000292478 CES2O00748 559 aa13.34□□□□□ -0.27
PTCD1-201ENST00000292478 PLEKP08567 350 aaPredicted RBP13.34□□□□□ -0.27
PTCD1-201ENST00000292478 SARSP49591 514 aaKnown RBP13.34□□□□□ -0.27
PTCD1-201ENST00000292478 ACTN3Q08043 901 aaPredicted RBP13.34□□□□□ -0.27
PTCD1-201ENST00000292478 CCL15Q16663 113 aa13.34□□□□□ -0.27
PTCD1-201ENST00000292478 DCAF6Q58WW2 860 aa13.34□□□□□ -0.27
PTCD1-201ENST00000292478 WDR49Q8IV35 697 aa13.34□□□□□ -0.27
PTCD1-201ENST00000292478 UBA3Q8TBC4 463 aa13.34□□□□□ -0.27
PTCD1-201ENST00000292478 ATXN7L3BQ96GX2 97 aa13.34□□□□□ -0.27
PTCD1-201ENST00000292478 PRMT6Q96LA8 375 aaPredicted RBP13.34□□□□□ -0.27
PTCD1-201ENST00000292478 CHCHD3Q9NX63 227 aaKnown RBP13.34□□□□□ -0.27
PTCD1-201ENST00000292478 WARS2Q9UGM6 360 aaKnown RBP13.34□□□□□ -0.27
PTCD1-201ENST00000292478 CDYLQ9Y232 598 aa13.34□□□□□ -0.27
PTCD1-201ENST00000292478 SLC30A1Q9Y6M5 507 aa13.34□□□□□ -0.27
PTCD1-201ENST00000292478 MAP2P11137 1827 aaKnown RBP13.34□□□□□ -0.27
PTCD1-201ENST00000292478 H2AFYO75367 372 aaKnown RBP13.34□□□□□ -0.27
PTCD1-201ENST00000292478 KCNA1Q09470 495 aa13.34□□□□□ -0.27
PTCD1-201ENST00000292478 LVRNQ6Q4G3 990 aa13.34□□□□□ -0.27
PTCD1-201ENST00000292478 FAM83AQ86UY5 434 aa13.34□□□□□ -0.27
PTCD1-201ENST00000292478 RNF217Q8TC41 542 aa13.34□□□□□ -0.27
PTCD1-201ENST00000292478 E2F7Q96AV8 911 aa13.34□□□□□ -0.27
PTCD1-201ENST00000292478 NUDT12Q9BQG2 462 aa13.34□□□□□ -0.27
PTCD1-201ENST00000292478 AGO4Q9HCK5 861 aaKnown RBP13.34□□□□□ -0.27
PTCD1-201ENST00000292478 ARP10275 920 aa13.34□□□□□ -0.27
PTCD1-201ENST00000292478 RARGP13631 454 aa13.34□□□□□ -0.27
PTCD1-201ENST00000292478 C11orf63Q6NUN7 778 aa13.34□□□□□ -0.27
PTCD1-201ENST00000292478 RSPH10B2B2RC85 870 aa13.34□□□□□ -0.27
PTCD1-201ENST00000292478 RSPH10BP0C881 870 aa13.34□□□□□ -0.27
PTCD1-201ENST00000292478 ODC1P11926 461 aa13.34□□□□□ -0.27
PTCD1-201ENST00000292478 KCNJ1P48048 391 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms