RNA–Protein interactions for RNA: ENST00000289957.2

CHRNB3-201, Transcript of cholinergic receptor nicotinic beta 3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNB3, Length 2,294 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB3-201ENST00000289957 GTF2H1P32780 548 aa12.23□□□□□ -0.45
CHRNB3-201ENST00000289957 CLCNKBP51801 687 aa12.23□□□□□ -0.45
CHRNB3-201ENST00000289957 JAM2P57087 298 aa12.23□□□□□ -0.45
CHRNB3-201ENST00000289957 IFT20Q8IY31 132 aa12.23□□□□□ -0.45
CHRNB3-201ENST00000289957 SEPT8Q92599 483 aa12.23□□□□□ -0.45
CHRNB3-201ENST00000289957 TRAIPQ9BWF2 469 aa12.23□□□□□ -0.45
CHRNB3-201ENST00000289957 PLCB1Q9NQ66 1216 aa12.23□□□□□ -0.45
CHRNB3-201ENST00000289957 CXXC1Q9P0U4 656 aaPredicted RBP12.23□□□□□ -0.45
CHRNB3-201ENST00000289957 DNAJB4Q9UDY4 337 aa12.23□□□□□ -0.45
CHRNB3-201ENST00000289957 C2CD2Q9Y426 696 aa12.23□□□□□ -0.45
CHRNB3-201ENST00000289957 TDRD15B5MCY1 1934 aaKnown RBP12.23□□□□□ -0.45
CHRNB3-201ENST00000289957 PTPRSQ13332 1948 aa12.23□□□□□ -0.45
CHRNB3-201ENST00000289957 BHMG1C9JSJ3 638 aaPredicted RBP12.22□□□□□ -0.45
CHRNB3-201ENST00000289957 F8VZ95 297 aa12.22□□□□□ -0.45
CHRNB3-201ENST00000289957 HSF2BPO75031 334 aa12.22□□□□□ -0.45
CHRNB3-201ENST00000289957 GFPT2O94808 682 aa12.22□□□□□ -0.45
CHRNB3-201ENST00000289957 ASS1P00966 412 aaKnown RBP12.22□□□□□ -0.45
CHRNB3-201ENST00000289957 CD58P19256 250 aa12.22□□□□□ -0.45
CHRNB3-201ENST00000289957 CCDC142Q17RM4 750 aa12.22□□□□□ -0.45
CHRNB3-201ENST00000289957 WDR72Q3MJ13 1102 aa12.22□□□□□ -0.45
CHRNB3-201ENST00000289957 ZNF394Q53GI3 561 aa12.22□□□□□ -0.45
CHRNB3-201ENST00000289957 TDRD12Q587J7 1177 aaKnown RBP12.22□□□□□ -0.45
CHRNB3-201ENST00000289957 MEI1Q5TIA1 1274 aa12.22□□□□□ -0.45
CHRNB3-201ENST00000289957 C9orf57Q5W0N0 161 aa12.22□□□□□ -0.45
CHRNB3-201ENST00000289957 LPIN3Q9BQK8 851 aa12.22□□□□□ -0.45
CHRNB3-201ENST00000289957 SALL4Q9UJQ4 1053 aa12.22□□□□□ -0.45
CHRNB3-201ENST00000289957 NME7Q9Y5B8 376 aa12.22□□□□□ -0.45
CHRNB3-201ENST00000289957 COL4A6Q14031 1691 aa12.22□□□□□ -0.45
CHRNB3-201ENST00000289957 SRRM3A6NNA2 597 aaPredicted RBP12.22□□□□□ -0.45
CHRNB3-201ENST00000289957 KCNE1P15382 129 aa12.22□□□□□ -0.45
CHRNB3-201ENST00000289957 USP8P40818 1118 aa12.22□□□□□ -0.45
CHRNB3-201ENST00000289957 ASPAP45381 313 aa12.22□□□□□ -0.45
CHRNB3-201ENST00000289957 FAM189BP81408 668 aa12.22□□□□□ -0.45
CHRNB3-201ENST00000289957 GFPT1Q06210 699 aaPredicted RBP12.22□□□□□ -0.45
CHRNB3-201ENST00000289957 ZNF699Q32M78 642 aa12.22□□□□□ -0.45
CHRNB3-201ENST00000289957 MFSD5Q6N075 450 aa12.22□□□□□ -0.45
CHRNB3-201ENST00000289957 WHAMMQ8TF30 809 aa12.22□□□□□ -0.45
CHRNB3-201ENST00000289957 PLEKHA5Q9HAU0 1116 aa12.22□□□□□ -0.45
CHRNB3-201ENST00000289957 FBXL5Q9UKA1 691 aa12.22□□□□□ -0.45
CHRNB3-201ENST00000289957 NENFQ9UMX5 172 aa12.22□□□□□ -0.45
CHRNB3-201ENST00000289957 PMM2O15305 246 aa12.21□□□□□ -0.45
CHRNB3-201ENST00000289957 EIF3HO15372 352 aaKnown RBP eCLIP12.21□□□□□ -0.45
CHRNB3-201ENST00000289957 P4HA2O15460 535 aa12.21□□□□□ -0.45
CHRNB3-201ENST00000289957 ZMYND10O75800 440 aa12.21□□□□□ -0.45
CHRNB3-201ENST00000289957 CFHP08603 1231 aa12.21□□□□□ -0.45
CHRNB3-201ENST00000289957 TRPC3Q13507 836 aa12.21□□□□□ -0.45
CHRNB3-201ENST00000289957 ASIC2Q16515 512 aa12.21□□□□□ -0.45
CHRNB3-201ENST00000289957 DNAJC21Q5F1R6 531 aaKnown RBP12.21□□□□□ -0.45
CHRNB3-201ENST00000289957 USP37Q86T82 979 aa12.21□□□□□ -0.45
CHRNB3-201ENST00000289957 OLIG1Q8TAK6 271 aa12.21□□□□□ -0.45
CHRNB3-201ENST00000289957 HPDLQ96IR7 371 aa12.21□□□□□ -0.45
CHRNB3-201ENST00000289957 RBM12Q9NTZ6 932 aaKnown RBP12.21□□□□□ -0.45
CHRNB3-201ENST00000289957 BZW2Q9Y6E2 419 aaKnown RBP12.21□□□□□ -0.45
CHRNB3-201ENST00000289957 PRUNE2Q8WUY3 3088 aa12.21□□□□□ -0.45
CHRNB3-201ENST00000289957 THP07101 528 aa12.21□□□□□ -0.46
CHRNB3-201ENST00000289957 PRKCIP41743 596 aa12.21□□□□□ -0.46
CHRNB3-201ENST00000289957 FOXR1Q6PIV2 292 aa12.21□□□□□ -0.46
CHRNB3-201ENST00000289957 TMEM173Q86WV6 379 aaPredicted RBP12.21□□□□□ -0.46
CHRNB3-201ENST00000289957 PALB2Q86YC2 1186 aa12.21□□□□□ -0.46
CHRNB3-201ENST00000289957 HDAC7Q8WUI4 952 aa12.21□□□□□ -0.46
CHRNB3-201ENST00000289957 SLC20A1Q8WUM9 679 aa12.21□□□□□ -0.46
CHRNB3-201ENST00000289957 RIN2Q8WYP3 895 aaPredicted RBP12.21□□□□□ -0.46
CHRNB3-201ENST00000289957 NT5C1BQ96P26 610 aa12.21□□□□□ -0.46
CHRNB3-201ENST00000289957 CASD1Q96PB1 797 aa12.21□□□□□ -0.46
CHRNB3-201ENST00000289957 TWNKQ96RR1 684 aa12.21□□□□□ -0.46
CHRNB3-201ENST00000289957 RPS6KC1Q96S38 1066 aa12.21□□□□□ -0.46
CHRNB3-201ENST00000289957 RUFY1Q96T51 708 aa12.21□□□□□ -0.46
CHRNB3-201ENST00000289957 TBC1D13Q9NVG8 400 aa12.21□□□□□ -0.46
CHRNB3-201ENST00000289957 TMEM59LQ9UK28 342 aa12.21□□□□□ -0.46
CHRNB3-201ENST00000289957 GIT1Q9Y2X7 761 aa12.21□□□□□ -0.46
CHRNB3-201ENST00000289957 TIMM13Q9Y5L4 95 aaPredicted RBP12.21□□□□□ -0.46
CHRNB3-201ENST00000289957 LTBP2Q14767 1821 aa12.2□□□□□ -0.46
CHRNB3-201ENST00000289957 NT5C1B-RDH14C9J2C7 533 aa12.2□□□□□ -0.46
CHRNB3-201ENST00000289957 CYP26A1O43174 497 aa12.2□□□□□ -0.46
CHRNB3-201ENST00000289957 ACO1P21399 889 aaKnown RBP12.2□□□□□ -0.46
CHRNB3-201ENST00000289957 RAB27AP51159 221 aa12.2□□□□□ -0.46
CHRNB3-201ENST00000289957 TNNC1P63316 161 aa12.2□□□□□ -0.46
CHRNB3-201ENST00000289957 CETN1Q12798 172 aa12.2□□□□□ -0.46
CHRNB3-201ENST00000289957 CUL2Q13617 745 aa12.2□□□□□ -0.46
CHRNB3-201ENST00000289957 IFI16Q16666 785 aaKnown RBP12.2□□□□□ -0.46
CHRNB3-201ENST00000289957 KYAT1Q16773 422 aa12.2□□□□□ -0.46
CHRNB3-201ENST00000289957 CD300LGQ6UXG3 332 aa12.2□□□□□ -0.46
CHRNB3-201ENST00000289957 ZNF365Q70YC5 407 aa12.2□□□□□ -0.46
CHRNB3-201ENST00000289957 IRF2BP2Q7Z5L9 587 aa12.2□□□□□ -0.46
CHRNB3-201ENST00000289957 APBB1IPQ7Z5R6 666 aaPredicted RBP12.2□□□□□ -0.46
CHRNB3-201ENST00000289957 SLC47A2Q86VL8 602 aa12.2□□□□□ -0.46
CHRNB3-201ENST00000289957 TSEN2Q8NCE0 465 aaKnown RBP12.2□□□□□ -0.46
CHRNB3-201ENST00000289957 SPAG5Q96R06 1193 aa12.2□□□□□ -0.46
CHRNB3-201ENST00000289957 FTHL17Q9BXU8 183 aa12.2□□□□□ -0.46
CHRNB3-201ENST00000289957 CAPS2Q9BXY5 557 aa12.2□□□□□ -0.46
CHRNB3-201ENST00000289957 C1orf112Q9NSG2 853 aa12.2□□□□□ -0.46
CHRNB3-201ENST00000289957 PIRO00625 290 aa12.2□□□□□ -0.46
CHRNB3-201ENST00000289957 NCK2O43639 380 aa12.2□□□□□ -0.46
CHRNB3-201ENST00000289957 EVI5O60447 810 aa12.2□□□□□ -0.46
CHRNB3-201ENST00000289957 BRCC3P46736 316 aa12.2□□□□□ -0.46
CHRNB3-201ENST00000289957 IRAK1P51617 712 aa12.2□□□□□ -0.46
CHRNB3-201ENST00000289957 BCAR1P56945 870 aa12.2□□□□□ -0.46
CHRNB3-201ENST00000289957 SURF1Q15526 300 aa12.2□□□□□ -0.46
CHRNB3-201ENST00000289957 FNDC1Q4ZHG4 1894 aaPredicted RBP12.2□□□□□ -0.46
CHRNB3-201ENST00000289957 CNKSR3Q6P9H4 555 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms