RNA–Protein interactions for RNA: ENST00000289448.2

HMHB1-201, Transcript of histocompatibility minor HB-1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HMHB1, Length 384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMHB1-201ENST00000289448 MTMR12Q9C0I1 747 aa10.28□□□□□ -0.76
HMHB1-201ENST00000289448 SLITRK6Q9H5Y7 841 aa10.28□□□□□ -0.76
HMHB1-201ENST00000289448 TMEM206Q9H813 350 aa10.28□□□□□ -0.76
HMHB1-201ENST00000289448 BRD9Q9H8M2 597 aa10.28□□□□□ -0.76
HMHB1-201ENST00000289448 IL21Q9HBE4 155 aa10.28□□□□□ -0.76
HMHB1-201ENST00000289448 HSFX1Q9UBD0 423 aa10.28□□□□□ -0.76
HMHB1-201ENST00000289448 PCDHA7Q9UN72 937 aa10.28□□□□□ -0.76
HMHB1-201ENST00000289448 ASB3Q9Y575 518 aa10.28□□□□□ -0.76
HMHB1-201ENST00000289448 R4GN57 208 aa10.28□□□□□ -0.76
HMHB1-201ENST00000289448 CACNA1AO00555 2505 aa10.27□□□□□ -0.77
HMHB1-201ENST00000289448 TGFB1I1O43294 461 aa10.27□□□□□ -0.77
HMHB1-201ENST00000289448 ACAT1P24752 427 aaKnown RBP10.27□□□□□ -0.77
HMHB1-201ENST00000289448 GABRR2P28476 465 aa10.27□□□□□ -0.77
HMHB1-201ENST00000289448 PNPLA4P41247 253 aa10.27□□□□□ -0.77
HMHB1-201ENST00000289448 TUFMP49411 452 aaKnown RBP10.27□□□□□ -0.77
HMHB1-201ENST00000289448 GPR15P49685 360 aa10.27□□□□□ -0.77
HMHB1-201ENST00000289448 ASIC1P78348 528 aa10.27□□□□□ -0.77
HMHB1-201ENST00000289448 DNM1Q05193 864 aaKnown RBP10.27□□□□□ -0.77
HMHB1-201ENST00000289448 BFSP1Q12934 665 aa10.27□□□□□ -0.77
HMHB1-201ENST00000289448 RESP18Q5W5W9 173 aa10.27□□□□□ -0.77
HMHB1-201ENST00000289448 ZNF852Q6ZMS4 543 aa10.27□□□□□ -0.77
HMHB1-201ENST00000289448 TMEM150AQ86TG1 271 aa10.27□□□□□ -0.77
HMHB1-201ENST00000289448 OSTM1Q86WC4 334 aa10.27□□□□□ -0.77
HMHB1-201ENST00000289448 ARID3BQ8IVW6 561 aaPredicted RBP10.27□□□□□ -0.77
HMHB1-201ENST00000289448 MFSD6LQ8IWD5 586 aa10.27□□□□□ -0.77
HMHB1-201ENST00000289448 GRAMD1CQ8IYS0 662 aa10.27□□□□□ -0.77
HMHB1-201ENST00000289448 THEM5Q8N1Q8 247 aa10.27□□□□□ -0.77
HMHB1-201ENST00000289448 GPD1LQ8N335 351 aa10.27□□□□□ -0.77
HMHB1-201ENST00000289448 LRRC52Q8N7C0 313 aa10.27□□□□□ -0.77
HMHB1-201ENST00000289448 ZNF507Q8TCN5 953 aa10.27□□□□□ -0.77
HMHB1-201ENST00000289448 CACTINQ8WUQ7 758 aaKnown RBP10.27□□□□□ -0.77
HMHB1-201ENST00000289448 SCFD1Q8WVM8 642 aa10.27□□□□□ -0.77
HMHB1-201ENST00000289448 DNASE1L2Q92874 299 aa10.27□□□□□ -0.77
HMHB1-201ENST00000289448 ZNF560Q96MR9 790 aa10.27□□□□□ -0.77
HMHB1-201ENST00000289448 PKMYT1Q99640 499 aa10.27□□□□□ -0.77
HMHB1-201ENST00000289448 OSBPL6Q9BZF3 934 aa10.27□□□□□ -0.77
HMHB1-201ENST00000289448 BLZF1Q9H2G9 400 aa10.27□□□□□ -0.77
HMHB1-201ENST00000289448 ATXN3LQ9H3M9 355 aa10.27□□□□□ -0.77
HMHB1-201ENST00000289448 CUEDC2Q9H467 287 aa10.27□□□□□ -0.77
HMHB1-201ENST00000289448 ABI2Q9NYB9 513 aaPredicted RBP10.27□□□□□ -0.77
HMHB1-201ENST00000289448 HSPBP1Q9NZL4 362 aa10.27□□□□□ -0.77
HMHB1-201ENST00000289448 ITGA11Q9UKX5 1188 aa10.27□□□□□ -0.77
HMHB1-201ENST00000289448 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.26□□□□□ -0.77
HMHB1-201ENST00000289448 ZNF233A6NK53 670 aa10.26□□□□□ -0.77
HMHB1-201ENST00000289448 EIF3DO15371 548 aaKnown RBP eCLIP10.26□□□□□ -0.77
HMHB1-201ENST00000289448 PRAMEF12O95522 483 aa10.26□□□□□ -0.77
HMHB1-201ENST00000289448 KRT19P08727 400 aa10.26□□□□□ -0.77
HMHB1-201ENST00000289448 HMGA1P17096 107 aaKnown RBP10.26□□□□□ -0.77
HMHB1-201ENST00000289448 ME1P48163 572 aa10.26□□□□□ -0.77
HMHB1-201ENST00000289448 RBP5P82980 135 aa10.26□□□□□ -0.77
HMHB1-201ENST00000289448 CYP4F8P98187 520 aa10.26□□□□□ -0.77
HMHB1-201ENST00000289448 CUL4BQ13620 913 aa10.26□□□□□ -0.77
HMHB1-201ENST00000289448 SOWAHAQ2M3V2 549 aa10.26□□□□□ -0.77
HMHB1-201ENST00000289448 FAM26FQ5R3K3 315 aa10.26□□□□□ -0.77
HMHB1-201ENST00000289448 GPR158Q5T848 1215 aa10.26□□□□□ -0.77
HMHB1-201ENST00000289448 SDHAF4Q5VUM1 108 aa10.26□□□□□ -0.77
HMHB1-201ENST00000289448 LIMS2Q7Z4I7 341 aa10.26□□□□□ -0.77
HMHB1-201ENST00000289448 ITIH5Q86UX2 942 aa10.26□□□□□ -0.77
HMHB1-201ENST00000289448 NELFCDQ8IXH7 590 aa10.26□□□□□ -0.77
HMHB1-201ENST00000289448 ADSSL1Q8N142 457 aa10.26□□□□□ -0.77
HMHB1-201ENST00000289448 SPPL2BQ8TCT7 592 aa10.26□□□□□ -0.77
HMHB1-201ENST00000289448 KCNG4Q8TDN1 519 aa10.26□□□□□ -0.77
HMHB1-201ENST00000289448 C2orf15Q8WU43 125 aaKnown RBP10.26□□□□□ -0.77
HMHB1-201ENST00000289448 DEPDC1BQ8WUY9 529 aa10.26□□□□□ -0.77
HMHB1-201ENST00000289448 IRF7Q92985 503 aa10.26□□□□□ -0.77
HMHB1-201ENST00000289448 ACBD6Q9BR61 282 aa10.26□□□□□ -0.77
HMHB1-201ENST00000289448 PI4K2AQ9BTU6 479 aa10.26□□□□□ -0.77
HMHB1-201ENST00000289448 SLC46A2Q9BY10 475 aa10.26□□□□□ -0.77
HMHB1-201ENST00000289448 BCO2Q9BYV7 579 aa10.26□□□□□ -0.77
HMHB1-201ENST00000289448 LRRC27Q9C0I9 530 aa10.26□□□□□ -0.77
HMHB1-201ENST00000289448 GPR88Q9GZN0 384 aa10.26□□□□□ -0.77
HMHB1-201ENST00000289448 SMG9Q9H0W8 520 aaKnown RBP10.26□□□□□ -0.77
HMHB1-201ENST00000289448 GZF1Q9H116 711 aaPredicted RBP10.26□□□□□ -0.77
HMHB1-201ENST00000289448 TRPV5Q9NQA5 729 aa10.26□□□□□ -0.77
HMHB1-201ENST00000289448 AGPAT3Q9NRZ7 376 aa10.26□□□□□ -0.77
HMHB1-201ENST00000289448 INTS13Q9NVM9 706 aa10.26□□□□□ -0.77
HMHB1-201ENST00000289448 SPATA6Q9NWH7 488 aaPredicted RBP10.26□□□□□ -0.77
HMHB1-201ENST00000289448 GDAP2Q9NXN4 497 aa10.26□□□□□ -0.77
HMHB1-201ENST00000289448 DDX43Q9NXZ2 648 aaKnown RBP10.26□□□□□ -0.77
HMHB1-201ENST00000289448 RCOR1Q9UKL0 485 aa10.26□□□□□ -0.77
HMHB1-201ENST00000289448 SNX9Q9Y5X1 595 aa10.26□□□□□ -0.77
HMHB1-201ENST00000289448 COL4A2P08572 1712 aa10.25□□□□□ -0.77
HMHB1-201ENST00000289448 GABRDO14764 452 aa10.25□□□□□ -0.77
HMHB1-201ENST00000289448 ZNF263O14978 683 aa10.25□□□□□ -0.77
HMHB1-201ENST00000289448 CLIC2O15247 247 aa10.25□□□□□ -0.77
HMHB1-201ENST00000289448 HUS1O60921 280 aa10.25□□□□□ -0.77
HMHB1-201ENST00000289448 F11P03951 625 aa10.25□□□□□ -0.77
HMHB1-201ENST00000289448 HSP90AA1P07900 732 aaKnown RBP10.25□□□□□ -0.77
HMHB1-201ENST00000289448 CYP2F1P24903 491 aa10.25□□□□□ -0.77
HMHB1-201ENST00000289448 AFMP43652 599 aa10.25□□□□□ -0.77
HMHB1-201ENST00000289448 RPS9P46781 194 aaKnown RBP10.25□□□□□ -0.77
HMHB1-201ENST00000289448 SOX9P48436 509 aa10.25□□□□□ -0.77
HMHB1-201ENST00000289448 AMPD3Q01432 767 aa10.25□□□□□ -0.77
HMHB1-201ENST00000289448 FCHO2Q0JRZ9 810 aa10.25□□□□□ -0.77
HMHB1-201ENST00000289448 SMARCB1Q12824 385 aa10.25□□□□□ -0.77
HMHB1-201ENST00000289448 DDR2Q16832 855 aa10.25□□□□□ -0.77
HMHB1-201ENST00000289448 WDR44Q5JSH3 913 aa10.25□□□□□ -0.77
HMHB1-201ENST00000289448 INTS6LQ5JSJ4 861 aaKnown RBP10.25□□□□□ -0.77
HMHB1-201ENST00000289448 STXBP4Q6ZWJ1 553 aa10.25□□□□□ -0.77
HMHB1-201ENST00000289448 UNC13DQ70J99 1090 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms