RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 GABRDO14764 452 aa8.96□□□□□ -0.97
PTPDC1-201ENST00000288976 HUS1O60921 280 aa8.96□□□□□ -0.97
PTPDC1-201ENST00000288976 POMCP01189 267 aa8.96□□□□□ -0.97
PTPDC1-201ENST00000288976 CYLC1P35663 651 aaPredicted RBP8.96□□□□□ -0.97
PTPDC1-201ENST00000288976 GUCY2FP51841 1108 aa8.96□□□□□ -0.97
PTPDC1-201ENST00000288976 LRMPQ12912 555 aa8.96□□□□□ -0.97
PTPDC1-201ENST00000288976 TSTA3Q13630 321 aaPredicted RBP8.96□□□□□ -0.97
PTPDC1-201ENST00000288976 DPF3Q92784 378 aa8.96□□□□□ -0.97
PTPDC1-201ENST00000288976 NOCTQ9UK39 431 aaKnown RBP8.96□□□□□ -0.97
PTPDC1-201ENST00000288976 GOLGA6L10A0A0M3HER8 536 aa8.96□□□□□ -0.98
PTPDC1-201ENST00000288976 EIF3CLB5ME19 914 aaKnown RBP8.96□□□□□ -0.98
PTPDC1-201ENST00000288976 MED7O43513 233 aa8.96□□□□□ -0.98
PTPDC1-201ENST00000288976 DDHD2O94830 711 aa8.96□□□□□ -0.98
PTPDC1-201ENST00000288976 LSM8O95777 96 aaKnown RBP8.96□□□□□ -0.98
PTPDC1-201ENST00000288976 APBA1Q02410 837 aa8.96□□□□□ -0.98
PTPDC1-201ENST00000288976 PTPN21Q16825 1174 aa8.96□□□□□ -0.98
PTPDC1-201ENST00000288976 GSTA5Q7RTV2 222 aa8.96□□□□□ -0.98
PTPDC1-201ENST00000288976 RNF168Q8IYW5 571 aaPredicted RBP8.96□□□□□ -0.98
PTPDC1-201ENST00000288976 RBBP8NLQ8NC74 664 aaPredicted RBP8.96□□□□□ -0.98
PTPDC1-201ENST00000288976 GANCQ8TET4 914 aa8.96□□□□□ -0.98
PTPDC1-201ENST00000288976 EIF3CQ99613 913 aaKnown RBP8.96□□□□□ -0.98
PTPDC1-201ENST00000288976 HERC2P3Q9BVR0 1158 aa8.96□□□□□ -0.98
PTPDC1-201ENST00000288976 SMYD3Q9H7B4 428 aa8.96□□□□□ -0.98
PTPDC1-201ENST00000288976 NRDE2Q9H7Z3 1164 aa8.96□□□□□ -0.98
PTPDC1-201ENST00000288976 AAASQ9NRG9 546 aa8.96□□□□□ -0.98
PTPDC1-201ENST00000288976 PCDHB4Q9Y5E5 795 aa8.96□□□□□ -0.98
PTPDC1-201ENST00000288976 CCDC85CA6NKD9 419 aa8.96□□□□□ -0.98
PTPDC1-201ENST00000288976 FOXN3O00409 490 aaPredicted RBP8.96□□□□□ -0.98
PTPDC1-201ENST00000288976 PPEF2O14830 753 aa8.96□□□□□ -0.98
PTPDC1-201ENST00000288976 PPM1AP35813 382 aa8.96□□□□□ -0.98
PTPDC1-201ENST00000288976 RNASE9P60153 205 aaKnown RBP8.96□□□□□ -0.98
PTPDC1-201ENST00000288976 CREMQ03060 361 aa8.96□□□□□ -0.98
PTPDC1-201ENST00000288976 PTK2Q05397 1052 aa8.96□□□□□ -0.98
PTPDC1-201ENST00000288976 KLHL30Q0D2K2 578 aa8.96□□□□□ -0.98
PTPDC1-201ENST00000288976 SOWAHAQ2M3V2 549 aa8.96□□□□□ -0.98
PTPDC1-201ENST00000288976 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.96□□□□□ -0.98
PTPDC1-201ENST00000288976 ZNF365Q70YC5 407 aa8.96□□□□□ -0.98
PTPDC1-201ENST00000288976 METTL23Q86XA0 190 aa8.96□□□□□ -0.98
PTPDC1-201ENST00000288976 ADGRF2Q8IZF7 708 aa8.96□□□□□ -0.98
PTPDC1-201ENST00000288976 WHAMMQ8TF30 809 aa8.96□□□□□ -0.98
PTPDC1-201ENST00000288976 KBTBD7Q8WVZ9 684 aa8.96□□□□□ -0.98
PTPDC1-201ENST00000288976 CCDC114Q96M63 670 aa8.96□□□□□ -0.98
PTPDC1-201ENST00000288976 SAMD11Q96NU1 681 aa8.96□□□□□ -0.98
PTPDC1-201ENST00000288976 NHEJ1Q9H9Q4 299 aaPredicted RBP8.96□□□□□ -0.98
PTPDC1-201ENST00000288976 SF3B1O75533 1304 aaKnown RBP eCLIP8.95□□□□□ -0.98
PTPDC1-201ENST00000288976 SPTLC1O15269 473 aa8.95□□□□□ -0.98
PTPDC1-201ENST00000288976 GJB5O95377 273 aa8.95□□□□□ -0.98
PTPDC1-201ENST00000288976 BMP8BP34820 402 aa8.95□□□□□ -0.98
PTPDC1-201ENST00000288976 BSPRYQ5W0U4 402 aa8.95□□□□□ -0.98
PTPDC1-201ENST00000288976 CRYBG2Q8N1P7 616 aa8.95□□□□□ -0.98
PTPDC1-201ENST00000288976 PDCL2Q8N4E4 241 aa8.95□□□□□ -0.98
PTPDC1-201ENST00000288976 SLC30A5Q8TAD4 765 aa8.95□□□□□ -0.98
PTPDC1-201ENST00000288976 EPS8L1Q8TE68 723 aa8.95□□□□□ -0.98
PTPDC1-201ENST00000288976 CLP1Q92989 425 aaKnown RBP8.95□□□□□ -0.98
PTPDC1-201ENST00000288976 ZNF518BQ9C0D4 1074 aa8.95□□□□□ -0.98
PTPDC1-201ENST00000288976 INTUQ9ULD6 942 aa8.95□□□□□ -0.98
PTPDC1-201ENST00000288976 INSL6Q9Y581 213 aa8.95□□□□□ -0.98
PTPDC1-201ENST00000288976 CYB561D2O14569 222 aa8.95□□□□□ -0.98
PTPDC1-201ENST00000288976 UPP2O95045 317 aa8.95□□□□□ -0.98
PTPDC1-201ENST00000288976 VDRP11473 427 aa8.95□□□□□ -0.98
PTPDC1-201ENST00000288976 CYP11B1P15538 503 aa8.95□□□□□ -0.98
PTPDC1-201ENST00000288976 CDH5P33151 784 aaPredicted RBP8.95□□□□□ -0.98
PTPDC1-201ENST00000288976 CLCN1P35523 988 aa8.95□□□□□ -0.98
PTPDC1-201ENST00000288976 RGS19P49795 217 aa8.95□□□□□ -0.98
PTPDC1-201ENST00000288976 DEFB103AP81534 67 aa8.95□□□□□ -0.98
PTPDC1-201ENST00000288976 CDR2Q01850 454 aa8.95□□□□□ -0.98
PTPDC1-201ENST00000288976 ARHGAP44Q17R89 818 aa8.95□□□□□ -0.98
PTPDC1-201ENST00000288976 ARHGAP17Q68EM7 881 aa8.95□□□□□ -0.98
PTPDC1-201ENST00000288976 COLGALT1Q8NBJ5 622 aa8.95□□□□□ -0.98
PTPDC1-201ENST00000288976 DDX1Q92499 740 aaKnown RBP8.95□□□□□ -0.98
PTPDC1-201ENST00000288976 TMEM176AQ96HP8 235 aa8.95□□□□□ -0.98
PTPDC1-201ENST00000288976 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.95□□□□□ -0.98
PTPDC1-201ENST00000288976 MED10Q9BTT4 135 aa8.95□□□□□ -0.98
PTPDC1-201ENST00000288976 PLVAPQ9BX97 442 aa8.95□□□□□ -0.98
PTPDC1-201ENST00000288976 NT5C1AQ9BXI3 368 aa8.95□□□□□ -0.98
PTPDC1-201ENST00000288976 SDCBP2Q9H190 292 aa8.95□□□□□ -0.98
PTPDC1-201ENST00000288976 GOLGA2P5Q9HBQ8 144 aa8.95□□□□□ -0.98
PTPDC1-201ENST00000288976 MARCH5Q9NX47 278 aa8.95□□□□□ -0.98
PTPDC1-201ENST00000288976 ADAM28Q9UKQ2 775 aa8.95□□□□□ -0.98
PTPDC1-201ENST00000288976 MAFFQ9ULX9 164 aa8.95□□□□□ -0.98
PTPDC1-201ENST00000288976 SLC4A7Q9Y6M7 1214 aa8.95□□□□□ -0.98
PTPDC1-201ENST00000288976 CASTOR2A6NHX0 329 aa8.95□□□□□ -0.98
PTPDC1-201ENST00000288976 LRRN2O75325 713 aa8.95□□□□□ -0.98
PTPDC1-201ENST00000288976 ALDH2P05091 517 aa8.95□□□□□ -0.98
PTPDC1-201ENST00000288976 ACRP10323 421 aa8.95□□□□□ -0.98
PTPDC1-201ENST00000288976 HERC6Q8IVU3 1022 aa8.95□□□□□ -0.98
PTPDC1-201ENST00000288976 TNIP3Q96KP6 325 aa8.95□□□□□ -0.98
PTPDC1-201ENST00000288976 SENP8Q96LD8 212 aa8.95□□□□□ -0.98
PTPDC1-201ENST00000288976 AGPAT1Q99943 283 aa8.95□□□□□ -0.98
PTPDC1-201ENST00000288976 LHX5Q9H2C1 402 aa8.95□□□□□ -0.98
PTPDC1-201ENST00000288976 ARHGAP20Q9P2F6 1191 aa8.95□□□□□ -0.98
PTPDC1-201ENST00000288976 CDH9Q9ULB4 789 aa8.95□□□□□ -0.98
PTPDC1-201ENST00000288976 L1RE1Q9UN81 338 aa8.95□□□□□ -0.98
PTPDC1-201ENST00000288976 SNX9Q9Y5X1 595 aa8.95□□□□□ -0.98
PTPDC1-201ENST00000288976 COL4A4P53420 1690 aaPredicted RBP8.95□□□□□ -0.98
PTPDC1-201ENST00000288976 BTNL10A8MVZ5 291 aa8.94□□□□□ -0.98
PTPDC1-201ENST00000288976 H7C4K7 107 aa8.94□□□□□ -0.98
PTPDC1-201ENST00000288976 KIF5CO60282 957 aa8.94□□□□□ -0.98
PTPDC1-201ENST00000288976 FGFR3P22607 806 aa8.94□□□□□ -0.98
PTPDC1-201ENST00000288976 ELF1P32519 619 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms