RNA–Protein interactions for RNA: ENST00000288602.10

BRAF-201, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAF, Length 2,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-201ENST00000288602 GRIN2DO15399 1336 aa20.41■□□□□ 0.86
BRAF-201ENST00000288602 COL1A2P08123 1366 aa20.41■□□□□ 0.86
BRAF-201ENST00000288602 ZSWIM8A7E2V4 1837 aa20.41■□□□□ 0.86
BRAF-201ENST00000288602 TRIP11Q15643 1979 aa20.41■□□□□ 0.86
BRAF-201ENST00000288602 TP73O15350 636 aa20.41■□□□□ 0.86
BRAF-201ENST00000288602 ATF7P17544 494 aaPredicted RBP20.41■□□□□ 0.86
BRAF-201ENST00000288602 SLC29A2Q14542 456 aa20.41■□□□□ 0.86
BRAF-201ENST00000288602 KRT71Q3SY84 523 aa20.41■□□□□ 0.86
BRAF-201ENST00000288602 ART4Q93070 314 aa20.41■□□□□ 0.86
BRAF-201ENST00000288602 HPDLQ96IR7 371 aa20.41■□□□□ 0.86
BRAF-201ENST00000288602 ACAP3Q96P50 834 aa20.41■□□□□ 0.86
BRAF-201ENST00000288602 CPXM1Q96SM3 734 aa20.41■□□□□ 0.86
BRAF-201ENST00000288602 HES2Q9Y543 173 aa20.41■□□□□ 0.86
BRAF-201ENST00000288602 A0A1B0GUA9 196 aa20.4■□□□□ 0.86
BRAF-201ENST00000288602 HMGB1P1B2RPK0 211 aaPredicted RBP20.4■□□□□ 0.86
BRAF-201ENST00000288602 CDH5P33151 784 aaPredicted RBP20.4■□□□□ 0.86
BRAF-201ENST00000288602 RFC1P35251 1148 aaPredicted RBP20.4■□□□□ 0.86
BRAF-201ENST00000288602 PPP1R15BQ5SWA1 713 aa20.4■□□□□ 0.86
BRAF-201ENST00000288602 JOSD2Q8TAC2 188 aa20.4■□□□□ 0.86
BRAF-201ENST00000288602 DNAJC17Q9NVM6 304 aaKnown RBP20.4■□□□□ 0.86
BRAF-201ENST00000288602 SMIM23A6NLE4 172 aa20.39■□□□□ 0.86
BRAF-201ENST00000288602 PIK3R2O00459 728 aa20.39■□□□□ 0.86
BRAF-201ENST00000288602 SKOR1P84550 965 aa20.39■□□□□ 0.86
BRAF-201ENST00000288602 EMC1Q8N766 993 aa20.39■□□□□ 0.86
BRAF-201ENST00000288602 EXD1Q8NHP7 514 aa20.39■□□□□ 0.86
BRAF-201ENST00000288602 RUNDC3BQ96NL0 473 aa20.39■□□□□ 0.86
BRAF-201ENST00000288602 ZNF518BQ9C0D4 1074 aa20.39■□□□□ 0.86
BRAF-201ENST00000288602 PABPC3Q9H361 631 aaKnown RBP20.39■□□□□ 0.86
BRAF-201ENST00000288602 ASB7Q9H672 318 aa20.39■□□□□ 0.86
BRAF-201ENST00000288602 FLRT1Q9NZU1 646 aa20.39■□□□□ 0.86
BRAF-201ENST00000288602 NOVA2Q9UNW9 492 aaKnown RBP20.39■□□□□ 0.86
BRAF-201ENST00000288602 UNCXA6NJT0 531 aa20.39■□□□□ 0.85
BRAF-201ENST00000288602 NPTXRO95502 500 aa20.39■□□□□ 0.85
BRAF-201ENST00000288602 KRT1P04264 644 aa20.39■□□□□ 0.85
BRAF-201ENST00000288602 YWHAEP62258 255 aaKnown RBP20.39■□□□□ 0.85
BRAF-201ENST00000288602 NFX1Q12986 1120 aaKnown RBP20.39■□□□□ 0.85
BRAF-201ENST00000288602 PPP1R2P3Q6NXS1 205 aa20.39■□□□□ 0.85
BRAF-201ENST00000288602 MFSD7Q6UXD7 560 aa20.39■□□□□ 0.85
BRAF-201ENST00000288602 KDM7AQ6ZMT4 941 aa20.39■□□□□ 0.85
BRAF-201ENST00000288602 C3orf20Q8ND61 904 aa20.39■□□□□ 0.85
BRAF-201ENST00000288602 DPP3Q9NY33 737 aa20.39■□□□□ 0.85
BRAF-201ENST00000288602 MTRF1LQ9UGC7 380 aaKnown RBP20.39■□□□□ 0.85
BRAF-201ENST00000288602 CILPO75339 1184 aa20.38■□□□□ 0.85
BRAF-201ENST00000288602 PSMC4P43686 418 aa20.38■□□□□ 0.85
BRAF-201ENST00000288602 PTPN11Q06124 597 aaPredicted RBP20.38■□□□□ 0.85
BRAF-201ENST00000288602 CALCOCO2Q13137 446 aa20.38■□□□□ 0.85
BRAF-201ENST00000288602 IQSEC1Q6DN90 963 aa20.38■□□□□ 0.85
BRAF-201ENST00000288602 UBA3Q8TBC4 463 aa20.38■□□□□ 0.85
BRAF-201ENST00000288602 RAPGEF5Q92565 580 aa20.38■□□□□ 0.85
BRAF-201ENST00000288602 KIF12Q96FN5 646 aa20.38■□□□□ 0.85
BRAF-201ENST00000288602 TMEM176AQ96HP8 235 aa20.38■□□□□ 0.85
BRAF-201ENST00000288602 HEXIM2Q96MH2 286 aaKnown RBP20.38■□□□□ 0.85
BRAF-201ENST00000288602 PWWP2AQ96N64 755 aa20.38■□□□□ 0.85
BRAF-201ENST00000288602 OSMRQ99650 979 aa20.38■□□□□ 0.85
BRAF-201ENST00000288602 ADPGKQ9BRR6 497 aa20.38■□□□□ 0.85
BRAF-201ENST00000288602 CITO14578 2027 aa20.38■□□□□ 0.85
BRAF-201ENST00000288602 RPS6KA5O75582 802 aa20.38■□□□□ 0.85
BRAF-201ENST00000288602 ERBB2P04626 1255 aa20.38■□□□□ 0.85
BRAF-201ENST00000288602 MAN1A1P33908 653 aa20.38■□□□□ 0.85
BRAF-201ENST00000288602 HIC1Q14526 733 aa20.38■□□□□ 0.85
BRAF-201ENST00000288602 SMTNL2Q2TAL5 461 aa20.38■□□□□ 0.85
BRAF-201ENST00000288602 ODF2Q5BJF6 829 aa20.38■□□□□ 0.85
BRAF-201ENST00000288602 HAUS1Q96CS2 278 aa20.38■□□□□ 0.85
BRAF-201ENST00000288602 SLITRK1Q96PX8 696 aa20.38■□□□□ 0.85
BRAF-201ENST00000288602 EIF2AQ9BY44 585 aaKnown RBP20.38■□□□□ 0.85
BRAF-201ENST00000288602 SYNCQ9H7C4 482 aa20.38■□□□□ 0.85
BRAF-201ENST00000288602 SNTG2Q9NY99 539 aa20.38■□□□□ 0.85
BRAF-201ENST00000288602 PARP2Q9UGN5 583 aa20.38■□□□□ 0.85
BRAF-201ENST00000288602 TLDC2A0PJX2 215 aa20.37■□□□□ 0.85
BRAF-201ENST00000288602 EIF3HO15372 352 aaKnown RBP eCLIP20.37■□□□□ 0.85
BRAF-201ENST00000288602 CAND2O75155 1236 aa20.37■□□□□ 0.85
BRAF-201ENST00000288602 MICAL2O94851 1124 aa20.37■□□□□ 0.85
BRAF-201ENST00000288602 KRT3P12035 628 aa20.37■□□□□ 0.85
BRAF-201ENST00000288602 HOXA11P31270 313 aaPredicted RBP20.37■□□□□ 0.85
BRAF-201ENST00000288602 CHKAP35790 457 aa20.37■□□□□ 0.85
BRAF-201ENST00000288602 PSMC1P62191 440 aaKnown RBP20.37■□□□□ 0.85
BRAF-201ENST00000288602 PDE4CQ08493 712 aa20.37■□□□□ 0.85
BRAF-201ENST00000288602 KCNT1Q5JUK3 1230 aa20.37■□□□□ 0.85
BRAF-201ENST00000288602 CST9Q5W186 159 aa20.37■□□□□ 0.85
BRAF-201ENST00000288602 DENND2CQ68D51 928 aa20.37■□□□□ 0.85
BRAF-201ENST00000288602 MAIP1Q8WWC4 291 aa20.37■□□□□ 0.85
BRAF-201ENST00000288602 SLCO2A1Q92959 643 aa20.37■□□□□ 0.85
BRAF-201ENST00000288602 PPEF2O14830 753 aa20.37■□□□□ 0.85
BRAF-201ENST00000288602 MED7O43513 233 aa20.37■□□□□ 0.85
BRAF-201ENST00000288602 IVDP26440 423 aa20.37■□□□□ 0.85
BRAF-201ENST00000288602 CCL14Q16627 93 aa20.37■□□□□ 0.85
BRAF-201ENST00000288602 GLRA4Q5JXX5 417 aa20.37■□□□□ 0.85
BRAF-201ENST00000288602 RUFY4Q6ZNE9 571 aa20.37■□□□□ 0.85
BRAF-201ENST00000288602 ATL2Q8NHH9 583 aa20.37■□□□□ 0.85
BRAF-201ENST00000288602 ADAMTS10Q9H324 1103 aa20.37■□□□□ 0.85
BRAF-201ENST00000288602 ZWILCHQ9H900 591 aa20.37■□□□□ 0.85
BRAF-201ENST00000288602 METTL5Q9NRN9 209 aaKnown RBP20.37■□□□□ 0.85
BRAF-201ENST00000288602 CALCOCO1Q9P1Z2 691 aa20.37■□□□□ 0.85
BRAF-201ENST00000288602 M0QYV0 167 aa20.36■□□□□ 0.85
BRAF-201ENST00000288602 SMIM10L2AP0DMW4 78 aa20.36■□□□□ 0.85
BRAF-201ENST00000288602 SMIM10L2BP0DMW5 78 aa20.36■□□□□ 0.85
BRAF-201ENST00000288602 HOXD8P13378 290 aaPredicted RBP20.36■□□□□ 0.85
BRAF-201ENST00000288602 PSMA2P25787 234 aa20.36■□□□□ 0.85
BRAF-201ENST00000288602 ADCY8P40145 1251 aa20.36■□□□□ 0.85
BRAF-201ENST00000288602 MAGOHP61326 146 aaKnown RBP20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms