RNA–Protein interactions for RNA: ENST00000288398.10

TPM1-202, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-202ENST00000288398 CCDC65Q8IXS2 484 aa15.13■□□□□ 0.01
TPM1-202ENST00000288398 CELF5Q8N6W0 485 aaKnown RBP15.13■□□□□ 0.01
TPM1-202ENST00000288398 BPIFB1Q8TDL5 484 aa15.13■□□□□ 0.01
TPM1-202ENST00000288398 RMDN1Q96DB5 314 aa15.13■□□□□ 0.01
TPM1-202ENST00000288398 SAAL1Q96ER3 474 aa15.13■□□□□ 0.01
TPM1-202ENST00000288398 CLIC6Q96NY7 704 aa15.13■□□□□ 0.01
TPM1-202ENST00000288398 EPC1Q9H2F5 836 aa15.13■□□□□ 0.01
TPM1-202ENST00000288398 TMEM206Q9H813 350 aa15.13■□□□□ 0.01
TPM1-202ENST00000288398 OLFML3Q9NRN5 406 aa15.13■□□□□ 0.01
TPM1-202ENST00000288398 PANK4Q9NVE7 773 aa15.13■□□□□ 0.01
TPM1-202ENST00000288398 USP18Q9UMW8 372 aa15.13■□□□□ 0.01
TPM1-202ENST00000288398 AGAP1Q9UPQ3 857 aa15.13■□□□□ 0.01
TPM1-202ENST00000288398 ZNF292O60281 2723 aa15.13■□□□□ 0.01
TPM1-202ENST00000288398 SPECC1L-ADORA2AF8WAN1 911 aa15.12■□□□□ 0.01
TPM1-202ENST00000288398 PRPF40AO75400 957 aaKnown RBP15.12■□□□□ 0.01
TPM1-202ENST00000288398 ITGB3P05106 788 aa15.12■□□□□ 0.01
TPM1-202ENST00000288398 TMEM191BP0C7N4 346 aa15.12■□□□□ 0.01
TPM1-202ENST00000288398 HAPLN1P10915 354 aaPredicted RBP15.12■□□□□ 0.01
TPM1-202ENST00000288398 GARTP22102 1010 aa15.12■□□□□ 0.01
TPM1-202ENST00000288398 POLR2BP30876 1174 aaKnown RBP15.12■□□□□ 0.01
TPM1-202ENST00000288398 RESTQ13127 1097 aa15.12■□□□□ 0.01
TPM1-202ENST00000288398 FZD5Q13467 585 aa15.12■□□□□ 0.01
TPM1-202ENST00000288398 STK38Q15208 465 aa15.12■□□□□ 0.01
TPM1-202ENST00000288398 CC2D1AQ6P1N0 951 aaPredicted RBP15.12■□□□□ 0.01
TPM1-202ENST00000288398 PRR23BQ6ZRT6 265 aa15.12■□□□□ 0.01
TPM1-202ENST00000288398 BRSK2Q8IWQ3 736 aa15.12■□□□□ 0.01
TPM1-202ENST00000288398 EFCAB13Q8IY85 973 aa15.12■□□□□ 0.01
TPM1-202ENST00000288398 SPEM1Q8N4L4 309 aa15.12■□□□□ 0.01
TPM1-202ENST00000288398 TTC8Q8TAM2 541 aa15.12■□□□□ 0.01
TPM1-202ENST00000288398 MRPS31Q92665 395 aaKnown RBP15.12■□□□□ 0.01
TPM1-202ENST00000288398 PANK2Q9BZ23 570 aa15.12■□□□□ 0.01
TPM1-202ENST00000288398 ZSCAN16Q9H4T2 348 aaPredicted RBP15.12■□□□□ 0.01
TPM1-202ENST00000288398 ITGA11Q9UKX5 1188 aa15.12■□□□□ 0.01
TPM1-202ENST00000288398 MAGED2Q9UNF1 606 aaPredicted RBP15.12■□□□□ 0.01
TPM1-202ENST00000288398 TICRRQ7Z2Z1 1910 aa15.11■□□□□ 0.01
TPM1-202ENST00000288398 EXTL3O43909 919 aa15.11■□□□□ 0.01
TPM1-202ENST00000288398 LILRB5O75023 590 aa15.11■□□□□ 0.01
TPM1-202ENST00000288398 PPP1R37O75864 691 aa15.11■□□□□ 0.01
TPM1-202ENST00000288398 CSH1P0DML2 217 aa15.11■□□□□ 0.01
TPM1-202ENST00000288398 CSH2P0DML3 217 aa15.11■□□□□ 0.01
TPM1-202ENST00000288398 CHRNB1P11230 501 aa15.11■□□□□ 0.01
TPM1-202ENST00000288398 ATF6P18850 670 aa15.11■□□□□ 0.01
TPM1-202ENST00000288398 DDX6P26196 483 aaKnown RBP eCLIP15.11■□□□□ 0.01
TPM1-202ENST00000288398 ADSSP30520 456 aa15.11■□□□□ 0.01
TPM1-202ENST00000288398 SOX9P48436 509 aa15.11■□□□□ 0.01
TPM1-202ENST00000288398 RPL10AP62906 217 aaKnown RBP15.11■□□□□ 0.01
TPM1-202ENST00000288398 AMPD2Q01433 879 aa15.11■□□□□ 0.01
TPM1-202ENST00000288398 LMNB2Q03252 620 aa15.11■□□□□ 0.01
TPM1-202ENST00000288398 MYO1EQ12965 1108 aa15.11■□□□□ 0.01
TPM1-202ENST00000288398 ITPRIPL2Q3MIP1 535 aa15.11■□□□□ 0.01
TPM1-202ENST00000288398 FAM173BQ6P4H8 233 aa15.11■□□□□ 0.01
TPM1-202ENST00000288398 CRELD2Q6UXH1 353 aaPredicted RBP15.11■□□□□ 0.01
TPM1-202ENST00000288398 MAMSTRQ6ZN01 415 aa15.11■□□□□ 0.01
TPM1-202ENST00000288398 TMEM86AQ8N2M4 240 aa15.11■□□□□ 0.01
TPM1-202ENST00000288398 CSGALNACT2Q8N6G5 542 aa15.11■□□□□ 0.01
TPM1-202ENST00000288398 EXOC4Q96A65 974 aa15.11■□□□□ 0.01
TPM1-202ENST00000288398 RSPRY1Q96DX4 576 aa15.11■□□□□ 0.01
TPM1-202ENST00000288398 ANKRD36BP1Q96IX9 119 aa15.11■□□□□ 0.01
TPM1-202ENST00000288398 ZFYVE19Q96K21 471 aa15.11■□□□□ 0.01
TPM1-202ENST00000288398 PI4K2AQ9BTU6 479 aa15.11■□□□□ 0.01
TPM1-202ENST00000288398 IKZF4Q9H2S9 585 aa15.11■□□□□ 0.01
TPM1-202ENST00000288398 DDX43Q9NXZ2 648 aaKnown RBP15.11■□□□□ 0.01
TPM1-202ENST00000288398 UXTQ9UBK9 157 aaPredicted RBP15.11■□□□□ 0.01
TPM1-202ENST00000288398 MYBPHLA2RUH7 354 aa15.1■□□□□ 0.01
TPM1-202ENST00000288398 GOLGA8IPA6NC78 632 aa15.1■□□□□ 0.01
TPM1-202ENST00000288398 GOLGA8JA6NMD2 632 aa15.1■□□□□ 0.01
TPM1-202ENST00000288398 PRR5-ARHGAP8B1AHC4 643 aa15.1■□□□□ 0.01
TPM1-202ENST00000288398 ARNTLO00327 626 aa15.1■□□□□ 0.01
TPM1-202ENST00000288398 KIAA0391O15091 583 aaKnown RBP15.1■□□□□ 0.01
TPM1-202ENST00000288398 TNNC2P02585 160 aa15.1■□□□□ 0.01
TPM1-202ENST00000288398 WEE1P30291 646 aa15.1■□□□□ 0.01
TPM1-202ENST00000288398 CTHP32929 405 aa15.1■□□□□ 0.01
TPM1-202ENST00000288398 RBP5P82980 135 aa15.1■□□□□ 0.01
TPM1-202ENST00000288398 ARHGAP8P85298 464 aa15.1■□□□□ 0.01
TPM1-202ENST00000288398 AMPD3Q01432 767 aa15.1■□□□□ 0.01
TPM1-202ENST00000288398 KCNA1Q09470 495 aa15.1■□□□□ 0.01
TPM1-202ENST00000288398 SLC39A14Q15043 492 aa15.1■□□□□ 0.01
TPM1-202ENST00000288398 RSPO4Q2I0M5 234 aaPredicted RBP15.1■□□□□ 0.01
TPM1-202ENST00000288398 CMTM8Q8IZV2 173 aa15.1■□□□□ 0.01
TPM1-202ENST00000288398 PDCL2Q8N4E4 241 aa15.1■□□□□ 0.01
TPM1-202ENST00000288398 LRRC52Q8N7C0 313 aa15.1■□□□□ 0.01
TPM1-202ENST00000288398 PDILTQ8N807 584 aa15.1■□□□□ 0.01
TPM1-202ENST00000288398 NELL1Q92832 810 aa15.1■□□□□ 0.01
TPM1-202ENST00000288398 DNAJC19Q96DA6 116 aa15.1■□□□□ 0.01
TPM1-202ENST00000288398 INTS4Q96HW7 963 aaKnown RBP15.1■□□□□ 0.01
TPM1-202ENST00000288398 PCIF1Q9H4Z3 704 aa15.1■□□□□ 0.01
TPM1-202ENST00000288398 KIF9Q9HAQ2 790 aa15.1■□□□□ 0.01
TPM1-202ENST00000288398 FOXD4L1Q9NU39 408 aa15.1■□□□□ 0.01
TPM1-202ENST00000288398 GTSE1Q9NYZ3 720 aa15.1■□□□□ 0.01
TPM1-202ENST00000288398 CDV3Q9UKY7 258 aaKnown RBP15.1■□□□□ 0.01
TPM1-202ENST00000288398 SNX9Q9Y5X1 595 aa15.1■□□□□ 0.01
TPM1-202ENST00000288398 FANCMQ8IYD8 2048 aa15.1■□□□□ 0.01
TPM1-202ENST00000288398 NCANO14594 1321 aa15.1■□□□□ 0.01
TPM1-202ENST00000288398 DMDP11532 3685 aa15.1■□□□□ 0.01
TPM1-202ENST00000288398 SHISA7A6NL88 538 aa15.09■□□□□ 0.01
TPM1-202ENST00000288398 PRAMEF12O95522 483 aa15.09■□□□□ 0.01
TPM1-202ENST00000288398 PCSK1P29120 753 aa15.09■□□□□ 0.01
TPM1-202ENST00000288398 LHX1P48742 406 aa15.09■□□□□ 0.01
TPM1-202ENST00000288398 SATB1Q01826 763 aa15.09■□□□□ 0.01
TPM1-202ENST00000288398 PON2Q15165 354 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms