RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 TMEM132AQ24JP5 1023 aa19.39■□□□□ 0.7
PDLIM3-201ENST00000284767 PHLDB2Q86SQ0 1253 aa19.39■□□□□ 0.7
PDLIM3-201ENST00000284767 BRCA2P51587 3418 aa19.39■□□□□ 0.7
PDLIM3-201ENST00000284767 O00370 1275 aa19.39■□□□□ 0.69
PDLIM3-201ENST00000284767 SCP2P22307 547 aa19.39■□□□□ 0.69
PDLIM3-201ENST00000284767 MAB21L3Q8N8X9 362 aa19.39■□□□□ 0.69
PDLIM3-201ENST00000284767 PPTC7Q8NI37 304 aa19.39■□□□□ 0.69
PDLIM3-201ENST00000284767 LENG1Q96BZ8 264 aaPredicted RBP19.39■□□□□ 0.69
PDLIM3-201ENST00000284767 IFT122Q9HBG6 1241 aa19.39■□□□□ 0.69
PDLIM3-201ENST00000284767 A0A087WZ62 844 aa19.39■□□□□ 0.69
PDLIM3-201ENST00000284767 PYGMP11217 842 aa19.39■□□□□ 0.69
PDLIM3-201ENST00000284767 MBTD1Q05BQ5 628 aa19.39■□□□□ 0.69
PDLIM3-201ENST00000284767 MESDQ14696 234 aa19.39■□□□□ 0.69
PDLIM3-201ENST00000284767 LLGL2Q6P1M3 1020 aa19.39■□□□□ 0.69
PDLIM3-201ENST00000284767 PLEKHH3Q7Z736 793 aa19.39■□□□□ 0.69
PDLIM3-201ENST00000284767 BRSK2Q8IWQ3 736 aa19.39■□□□□ 0.69
PDLIM3-201ENST00000284767 SLCO2A1Q92959 643 aa19.39■□□□□ 0.69
PDLIM3-201ENST00000284767 FDXACB1Q9BRP7 624 aaPredicted RBP19.39■□□□□ 0.69
PDLIM3-201ENST00000284767 WHRNQ9P202 907 aa19.39■□□□□ 0.69
PDLIM3-201ENST00000284767 IGF2BP3O00425 579 aaKnown RBP eCLIP19.38■□□□□ 0.69
PDLIM3-201ENST00000284767 GAS2O43903 313 aaKnown RBP19.38■□□□□ 0.69
PDLIM3-201ENST00000284767 ECEL1O95672 775 aa19.38■□□□□ 0.69
PDLIM3-201ENST00000284767 CHRM1P11229 460 aaPredicted RBP19.38■□□□□ 0.69
PDLIM3-201ENST00000284767 GZMAP12544 262 aa19.38■□□□□ 0.69
PDLIM3-201ENST00000284767 SIX1Q15475 284 aaPredicted RBP19.38■□□□□ 0.69
PDLIM3-201ENST00000284767 FAM110CQ1W6H9 321 aa19.38■□□□□ 0.69
PDLIM3-201ENST00000284767 ACCSLQ4AC99 568 aa19.38■□□□□ 0.69
PDLIM3-201ENST00000284767 ATF7IP2Q5U623 682 aa19.38■□□□□ 0.69
PDLIM3-201ENST00000284767 ABRAQ8N0Z2 381 aa19.38■□□□□ 0.69
PDLIM3-201ENST00000284767 TINF2Q9BSI4 451 aa19.38■□□□□ 0.69
PDLIM3-201ENST00000284767 FZD8Q9H461 694 aa19.38■□□□□ 0.69
PDLIM3-201ENST00000284767 ECT2Q9H8V3 914 aa19.38■□□□□ 0.69
PDLIM3-201ENST00000284767 C15orf41Q9Y2V0 281 aa19.38■□□□□ 0.69
PDLIM3-201ENST00000284767 PPME1Q9Y570 386 aa19.38■□□□□ 0.69
PDLIM3-201ENST00000284767 NOP14P78316 857 aaKnown RBP19.38■□□□□ 0.69
PDLIM3-201ENST00000284767 SF3A3Q12874 501 aaKnown RBP eCLIP19.38■□□□□ 0.69
PDLIM3-201ENST00000284767 NCOA4Q13772 614 aa19.38■□□□□ 0.69
PDLIM3-201ENST00000284767 CCDC38Q502W7 563 aa19.38■□□□□ 0.69
PDLIM3-201ENST00000284767 ARHGEF2Q92974 986 aaKnown RBP19.38■□□□□ 0.69
PDLIM3-201ENST00000284767 STAMBPL1Q96FJ0 436 aa19.38■□□□□ 0.69
PDLIM3-201ENST00000284767 CDC42EP4Q9H3Q1 356 aaKnown RBP19.38■□□□□ 0.69
PDLIM3-201ENST00000284767 LRRC19Q9H756 370 aa19.38■□□□□ 0.69
PDLIM3-201ENST00000284767 CPSF3Q9UKF6 684 aaKnown RBP19.38■□□□□ 0.69
PDLIM3-201ENST00000284767 AKT3Q9Y243 479 aa19.38■□□□□ 0.69
PDLIM3-201ENST00000284767 RBM47A0AV96 593 aaKnown RBP19.37■□□□□ 0.69
PDLIM3-201ENST00000284767 TCP11X1B4DZS4 312 aa19.37■□□□□ 0.69
PDLIM3-201ENST00000284767 H3BRB1 525 aa19.37■□□□□ 0.69
PDLIM3-201ENST00000284767 ACKR2O00590 384 aa19.37■□□□□ 0.69
PDLIM3-201ENST00000284767 OGTO15294 1046 aa19.37■□□□□ 0.69
PDLIM3-201ENST00000284767 ZC3H11AO75152 810 aaKnown RBP eCLIP19.37■□□□□ 0.69
PDLIM3-201ENST00000284767 ACO1P21399 889 aaKnown RBP19.37■□□□□ 0.69
PDLIM3-201ENST00000284767 MCL1Q07820 350 aa19.37■□□□□ 0.69
PDLIM3-201ENST00000284767 BNIP1Q12981 228 aa19.37■□□□□ 0.69
PDLIM3-201ENST00000284767 CUL2Q13617 745 aa19.37■□□□□ 0.69
PDLIM3-201ENST00000284767 ACVR2BQ13705 512 aa19.37■□□□□ 0.69
PDLIM3-201ENST00000284767 TMEM270Q6UE05 265 aa19.37■□□□□ 0.69
PDLIM3-201ENST00000284767 TUT1Q9H6E5 874 aaKnown RBP19.37■□□□□ 0.69
PDLIM3-201ENST00000284767 PTPRHQ9HD43 1115 aa19.37■□□□□ 0.69
PDLIM3-201ENST00000284767 BATF3Q9NR55 127 aa19.37■□□□□ 0.69
PDLIM3-201ENST00000284767 PTPN22Q9Y2R2 807 aa19.37■□□□□ 0.69
PDLIM3-201ENST00000284767 TMEM120BA0PK00 339 aa19.37■□□□□ 0.69
PDLIM3-201ENST00000284767 GJB6O95452 261 aa19.37■□□□□ 0.69
PDLIM3-201ENST00000284767 COPS2P61201 443 aa19.37■□□□□ 0.69
PDLIM3-201ENST00000284767 ENPEPQ07075 957 aa19.37■□□□□ 0.69
PDLIM3-201ENST00000284767 CCDC25Q86WR0 208 aa19.37■□□□□ 0.69
PDLIM3-201ENST00000284767 PASD1Q8IV76 773 aa19.37■□□□□ 0.69
PDLIM3-201ENST00000284767 CPA5Q8WXQ8 436 aa19.37■□□□□ 0.69
PDLIM3-201ENST00000284767 CPB2Q96IY4 423 aa19.37■□□□□ 0.69
PDLIM3-201ENST00000284767 C2orf40Q9H1Z8 148 aa19.37■□□□□ 0.69
PDLIM3-201ENST00000284767 FGFR1OP2Q9NVK5 253 aa19.37■□□□□ 0.69
PDLIM3-201ENST00000284767 NOP53Q9NZM5 478 aaKnown RBP19.37■□□□□ 0.69
PDLIM3-201ENST00000284767 ARL2BPQ9Y2Y0 163 aa19.37■□□□□ 0.69
PDLIM3-201ENST00000284767 TCRBV7S2A1N4TA0A589 114 aa19.36■□□□□ 0.69
PDLIM3-201ENST00000284767 RPSAP08865 295 aaKnown RBP19.36■□□□□ 0.69
PDLIM3-201ENST00000284767 PROZP22891 400 aa19.36■□□□□ 0.69
PDLIM3-201ENST00000284767 MYL6P60660 151 aa19.36■□□□□ 0.69
PDLIM3-201ENST00000284767 KCNJ2P63252 427 aa19.36■□□□□ 0.69
PDLIM3-201ENST00000284767 TFAMQ00059 246 aaKnown RBP19.36■□□□□ 0.69
PDLIM3-201ENST00000284767 MYO1EQ12965 1108 aa19.36■□□□□ 0.69
PDLIM3-201ENST00000284767 TFDP1Q14186 410 aa19.36■□□□□ 0.69
PDLIM3-201ENST00000284767 LONRF1Q17RB8 773 aa19.36■□□□□ 0.69
PDLIM3-201ENST00000284767 MPZL3Q6UWV2 235 aa19.36■□□□□ 0.69
PDLIM3-201ENST00000284767 TSHZ1Q6ZSZ6 1077 aa19.36■□□□□ 0.69
PDLIM3-201ENST00000284767 NSMCE1Q8WV22 266 aa19.36■□□□□ 0.69
PDLIM3-201ENST00000284767 ZNF653Q96CK0 615 aa19.36■□□□□ 0.69
PDLIM3-201ENST00000284767 MGAMO43451 1857 aa19.36■□□□□ 0.69
PDLIM3-201ENST00000284767 ANP32DO95626 131 aa19.36■□□□□ 0.69
PDLIM3-201ENST00000284767 CCND1P24385 295 aa19.36■□□□□ 0.69
PDLIM3-201ENST00000284767 VSTM1Q6UX27 236 aa19.36■□□□□ 0.69
PDLIM3-201ENST00000284767 ZNF467Q7Z7K2 595 aaPredicted RBP19.36■□□□□ 0.69
PDLIM3-201ENST00000284767 AGAP11Q8TF27 550 aa19.36■□□□□ 0.69
PDLIM3-201ENST00000284767 CDT1Q9H211 546 aa19.36■□□□□ 0.69
PDLIM3-201ENST00000284767 FLRT1Q9NZU1 646 aa19.36■□□□□ 0.69
PDLIM3-201ENST00000284767 PCDHB4Q9Y5E5 795 aa19.36■□□□□ 0.69
PDLIM3-201ENST00000284767 CEP350Q5VT06 3117 aa19.35■□□□□ 0.69
PDLIM3-201ENST00000284767 GPR25O00155 361 aa19.35■□□□□ 0.69
PDLIM3-201ENST00000284767 SPOPO43791 374 aa19.35■□□□□ 0.69
PDLIM3-201ENST00000284767 HOXC6P09630 235 aa19.35■□□□□ 0.69
PDLIM3-201ENST00000284767 CXCL8P10145 99 aa19.35■□□□□ 0.69
PDLIM3-201ENST00000284767 RWDD2BP57060 319 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms