RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 TUBGCP4Q9UGJ1 667 aa19■□□□□ 0.63
CAPN1-201ENST00000279247 ASIC3Q9UHC3 531 aa19■□□□□ 0.63
CAPN1-201ENST00000279247 SCN1AP35498 2009 aa19■□□□□ 0.63
CAPN1-201ENST00000279247 OPA1O60313 960 aa19■□□□□ 0.63
CAPN1-201ENST00000279247 GRAP2O75791 330 aa19■□□□□ 0.63
CAPN1-201ENST00000279247 C6orf222P0C671 652 aaPredicted RBP19■□□□□ 0.63
CAPN1-201ENST00000279247 PSMC1P62191 440 aaKnown RBP19■□□□□ 0.63
CAPN1-201ENST00000279247 SIX1Q15475 284 aaPredicted RBP19■□□□□ 0.63
CAPN1-201ENST00000279247 FAM187BQ17R55 369 aa19■□□□□ 0.63
CAPN1-201ENST00000279247 IQCKQ8N0W5 287 aa19■□□□□ 0.63
CAPN1-201ENST00000279247 MSL3Q8N5Y2 521 aaKnown RBP19■□□□□ 0.63
CAPN1-201ENST00000279247 CPXM1Q96SM3 734 aa19■□□□□ 0.63
CAPN1-201ENST00000279247 LPIN3Q9BQK8 851 aa19■□□□□ 0.63
CAPN1-201ENST00000279247 ZWILCHQ9H900 591 aa19■□□□□ 0.63
CAPN1-201ENST00000279247 FAM114A2Q9NRY5 505 aa19■□□□□ 0.63
CAPN1-201ENST00000279247 FAM49BQ9NUQ9 324 aa19■□□□□ 0.63
CAPN1-201ENST00000279247 HCRTO43612 131 aa19■□□□□ 0.63
CAPN1-201ENST00000279247 HOXA11P31270 313 aaPredicted RBP19■□□□□ 0.63
CAPN1-201ENST00000279247 HPDP32754 393 aaPredicted RBP19■□□□□ 0.63
CAPN1-201ENST00000279247 PTGIRP43119 386 aa19■□□□□ 0.63
CAPN1-201ENST00000279247 NDST1P52848 882 aa19■□□□□ 0.63
CAPN1-201ENST00000279247 ADCY2Q08462 1091 aa19■□□□□ 0.63
CAPN1-201ENST00000279247 NNTQ13423 1086 aa19■□□□□ 0.63
CAPN1-201ENST00000279247 FAM182AQ5T1J6 154 aa19■□□□□ 0.63
CAPN1-201ENST00000279247 ALS2CLQ60I27 953 aa19■□□□□ 0.63
CAPN1-201ENST00000279247 DUPD1Q68J44 220 aa19■□□□□ 0.63
CAPN1-201ENST00000279247 RHOT1Q8IXI2 618 aa19■□□□□ 0.63
CAPN1-201ENST00000279247 SLC4A11Q8NBS3 891 aa19■□□□□ 0.63
CAPN1-201ENST00000279247 JOSD2Q8TAC2 188 aa19■□□□□ 0.63
CAPN1-201ENST00000279247 AP5M1Q9H0R1 490 aa19■□□□□ 0.63
CAPN1-201ENST00000279247 GNEQ9Y223 722 aaKnown RBP19■□□□□ 0.63
CAPN1-201ENST00000279247 COL1A2P08123 1366 aa18.99■□□□□ 0.63
CAPN1-201ENST00000279247 A6NJR5 290 aa18.99■□□□□ 0.63
CAPN1-201ENST00000279247 TMEM88BA6NKF7 163 aa18.99■□□□□ 0.63
CAPN1-201ENST00000279247 CALB1P05937 261 aa18.99■□□□□ 0.63
CAPN1-201ENST00000279247 ZNF865P0CJ78 1059 aaPredicted RBP18.99■□□□□ 0.63
CAPN1-201ENST00000279247 RFC1P35251 1148 aaPredicted RBP18.99■□□□□ 0.63
CAPN1-201ENST00000279247 RGS7P49802 495 aa18.99■□□□□ 0.63
CAPN1-201ENST00000279247 PTPN11Q06124 597 aaPredicted RBP18.99■□□□□ 0.63
CAPN1-201ENST00000279247 ZNF252P-AS1Q0IIN9 211 aa18.99■□□□□ 0.63
CAPN1-201ENST00000279247 MORN1Q5T089 497 aa18.99■□□□□ 0.63
CAPN1-201ENST00000279247 UBAP2Q5T6F2 1119 aaKnown RBP18.99■□□□□ 0.63
CAPN1-201ENST00000279247 LRRC4CQ9HCJ2 640 aa18.99■□□□□ 0.63
CAPN1-201ENST00000279247 PARP2Q9UGN5 583 aa18.99■□□□□ 0.63
CAPN1-201ENST00000279247 KRT1P04264 644 aa18.99■□□□□ 0.63
CAPN1-201ENST00000279247 SLC1A1P43005 524 aa18.99■□□□□ 0.63
CAPN1-201ENST00000279247 DHX34Q14147 1143 aaKnown RBP18.99■□□□□ 0.63
CAPN1-201ENST00000279247 C17orf99Q6UX52 265 aa18.99■□□□□ 0.63
CAPN1-201ENST00000279247 EXOC4Q96A65 974 aa18.99■□□□□ 0.63
CAPN1-201ENST00000279247 ZMYND15Q9H091 742 aa18.99■□□□□ 0.63
CAPN1-201ENST00000279247 ASB7Q9H672 318 aa18.99■□□□□ 0.63
CAPN1-201ENST00000279247 GOLGA2P5Q9HBQ8 144 aa18.99■□□□□ 0.63
CAPN1-201ENST00000279247 PCSK1NQ9UHG2 260 aa18.99■□□□□ 0.63
CAPN1-201ENST00000279247 ECEL1O95672 775 aa18.98■□□□□ 0.63
CAPN1-201ENST00000279247 HSPA9P38646 679 aaKnown RBP18.98■□□□□ 0.63
CAPN1-201ENST00000279247 DYNLT1P63172 113 aa18.98■□□□□ 0.63
CAPN1-201ENST00000279247 KRT17Q04695 432 aa18.98■□□□□ 0.63
CAPN1-201ENST00000279247 TMC3Q7Z5M5 1100 aa18.98■□□□□ 0.63
CAPN1-201ENST00000279247 LRRC45Q96CN5 670 aa18.98■□□□□ 0.63
CAPN1-201ENST00000279247 ADAMTS10Q9H324 1103 aa18.98■□□□□ 0.63
CAPN1-201ENST00000279247 METTL5Q9NRN9 209 aaKnown RBP18.98■□□□□ 0.63
CAPN1-201ENST00000279247 LRRD1A4D1F6 860 aa18.98■□□□□ 0.63
CAPN1-201ENST00000279247 F2P00734 622 aa18.98■□□□□ 0.63
CAPN1-201ENST00000279247 HSPA6P17066 643 aa18.98■□□□□ 0.63
CAPN1-201ENST00000279247 YWHAEP62258 255 aaKnown RBP18.98■□□□□ 0.63
CAPN1-201ENST00000279247 SMC1BQ8NDV3 1235 aa18.98■□□□□ 0.63
CAPN1-201ENST00000279247 TMEM176AQ96HP8 235 aa18.98■□□□□ 0.63
CAPN1-201ENST00000279247 OSBPL8Q9BZF1 889 aa18.98■□□□□ 0.63
CAPN1-201ENST00000279247 IP6K2Q9UHH9 426 aa18.98■□□□□ 0.63
CAPN1-201ENST00000279247 TRPM7Q96QT4 1865 aa18.98■□□□□ 0.63
CAPN1-201ENST00000279247 MYADML2A6NDP7 307 aa18.98■□□□□ 0.63
CAPN1-201ENST00000279247 TMEM191CA6NGB0 347 aa18.98■□□□□ 0.63
CAPN1-201ENST00000279247 KRT3P12035 628 aa18.98■□□□□ 0.63
CAPN1-201ENST00000279247 PSMA2P25787 234 aa18.98■□□□□ 0.63
CAPN1-201ENST00000279247 PSEN2P49810 448 aa18.98■□□□□ 0.63
CAPN1-201ENST00000279247 FAM47CQ5HY64 1035 aa18.98■□□□□ 0.63
CAPN1-201ENST00000279247 ACOT1Q86TX2 421 aa18.98■□□□□ 0.63
CAPN1-201ENST00000279247 VCPIP1Q96JH7 1222 aa18.98■□□□□ 0.63
CAPN1-201ENST00000279247 RNF39Q9H2S5 420 aa18.98■□□□□ 0.63
CAPN1-201ENST00000279247 NRCAMQ92823 1304 aa18.97■□□□□ 0.63
CAPN1-201ENST00000279247 RRN3P2A6NIE6 340 aa18.97■□□□□ 0.63
CAPN1-201ENST00000279247 GPR32O75388 356 aa18.97■□□□□ 0.63
CAPN1-201ENST00000279247 RECQL4O94761 1208 aa18.97■□□□□ 0.63
CAPN1-201ENST00000279247 MICAL2O94851 1124 aa18.97■□□□□ 0.63
CAPN1-201ENST00000279247 PGK1P00558 417 aa18.97■□□□□ 0.63
CAPN1-201ENST00000279247 CTSHP09668 335 aa18.97■□□□□ 0.63
CAPN1-201ENST00000279247 RBP5P82980 135 aa18.97■□□□□ 0.63
CAPN1-201ENST00000279247 POU5F1BQ06416 359 aa18.97■□□□□ 0.63
CAPN1-201ENST00000279247 IFFO1Q0D2I5 559 aa18.97■□□□□ 0.63
CAPN1-201ENST00000279247 C7orf31Q8N865 590 aa18.97■□□□□ 0.63
CAPN1-201ENST00000279247 CACNG4Q9UBN1 327 aa18.97■□□□□ 0.63
CAPN1-201ENST00000279247 TLDC2A0PJX2 215 aa18.97■□□□□ 0.63
CAPN1-201ENST00000279247 CILPO75339 1184 aa18.97■□□□□ 0.63
CAPN1-201ENST00000279247 ERBB2P04626 1255 aa18.97■□□□□ 0.63
CAPN1-201ENST00000279247 PPP2R5EQ16537 467 aa18.97■□□□□ 0.63
CAPN1-201ENST00000279247 MFSD7Q6UXD7 560 aa18.97■□□□□ 0.63
CAPN1-201ENST00000279247 IFNLR1Q8IU57 520 aaPredicted RBP18.97■□□□□ 0.63
CAPN1-201ENST00000279247 CXorf38Q8TB03 319 aa18.97■□□□□ 0.63
CAPN1-201ENST00000279247 BCO2Q9BYV7 579 aa18.97■□□□□ 0.63
CAPN1-201ENST00000279247 FAM187AA6NFU0 413 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms