RNA–Protein interactions for RNA: ENST00000278386.10

CD44-203, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best) BASIC

Gene CD44, Length 484 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-203ENST00000278386 PRAMEF12O95522 483 aa13.76□□□□□ -0.21
CD44-203ENST00000278386 SYT1P21579 422 aa13.76□□□□□ -0.21
CD44-203ENST00000278386 ADSSP30520 456 aa13.76□□□□□ -0.21
CD44-203ENST00000278386 POLR2BP30876 1174 aaKnown RBP13.76□□□□□ -0.21
CD44-203ENST00000278386 PNPLA4P41247 253 aa13.76□□□□□ -0.21
CD44-203ENST00000278386 NRLP54845 237 aa13.76□□□□□ -0.21
CD44-203ENST00000278386 TSPY1Q01534 308 aa13.76□□□□□ -0.21
CD44-203ENST00000278386 KCNA1Q09470 495 aa13.76□□□□□ -0.21
CD44-203ENST00000278386 SMARCB1Q12824 385 aa13.76□□□□□ -0.21
CD44-203ENST00000278386 BFSP1Q12934 665 aa13.76□□□□□ -0.21
CD44-203ENST00000278386 ARHGAP29Q52LW3 1261 aa13.76□□□□□ -0.21
CD44-203ENST00000278386 C1orf228Q6PIY5 440 aa13.76□□□□□ -0.21
CD44-203ENST00000278386 CRELD2Q6UXH1 353 aaPredicted RBP13.76□□□□□ -0.21
CD44-203ENST00000278386 CCDC73Q6ZRK6 1079 aa13.76□□□□□ -0.21
CD44-203ENST00000278386 DGLUCYQ7Z3D6 616 aa13.76□□□□□ -0.21
CD44-203ENST00000278386 NT5DC4Q86YG4 428 aa13.76□□□□□ -0.21
CD44-203ENST00000278386 BRSK2Q8IWQ3 736 aa13.76□□□□□ -0.21
CD44-203ENST00000278386 DCP1BQ8IZD4 617 aaKnown RBP13.76□□□□□ -0.21
CD44-203ENST00000278386 ZNF687Q8N1G0 1237 aa13.76□□□□□ -0.21
CD44-203ENST00000278386 DNAJC19Q96DA6 116 aa13.76□□□□□ -0.21
CD44-203ENST00000278386 MKNK1Q9BUB5 465 aa13.76□□□□□ -0.21
CD44-203ENST00000278386 FAM126AQ9BYI3 521 aaPredicted RBP13.76□□□□□ -0.21
CD44-203ENST00000278386 RBM12Q9NTZ6 932 aaKnown RBP13.76□□□□□ -0.21
CD44-203ENST00000278386 FOXD4L1Q9NU39 408 aa13.76□□□□□ -0.21
CD44-203ENST00000278386 RBAKQ9NYW8 714 aaPredicted RBP13.76□□□□□ -0.21
CD44-203ENST00000278386 ANAPC1Q9H1A4 1944 aa13.76□□□□□ -0.21
CD44-203ENST00000278386 PTPRDP23468 1912 aa13.75□□□□□ -0.21
CD44-203ENST00000278386 GREB1Q4ZG55 1949 aa13.75□□□□□ -0.21
CD44-203ENST00000278386 SPECC1L-ADORA2AF8WAN1 911 aa13.75□□□□□ -0.21
CD44-203ENST00000278386 LILRB5O75023 590 aa13.75□□□□□ -0.21
CD44-203ENST00000278386 LDHAP00338 332 aaKnown RBP13.75□□□□□ -0.21
CD44-203ENST00000278386 ITGB3P05106 788 aa13.75□□□□□ -0.21
CD44-203ENST00000278386 CHRNB1P11230 501 aa13.75□□□□□ -0.21
CD44-203ENST00000278386 CTHP32929 405 aa13.75□□□□□ -0.21
CD44-203ENST00000278386 CASP5P51878 434 aa13.75□□□□□ -0.21
CD44-203ENST00000278386 SATB1Q01826 763 aa13.75□□□□□ -0.21
CD44-203ENST00000278386 POU5F1Q01860 360 aaKnown RBP13.75□□□□□ -0.21
CD44-203ENST00000278386 ALCAMQ13740 583 aa13.75□□□□□ -0.21
CD44-203ENST00000278386 LPAL2Q16609 132 aa13.75□□□□□ -0.21
CD44-203ENST00000278386 PRR23BQ6ZRT6 265 aa13.75□□□□□ -0.21
CD44-203ENST00000278386 ZSWIM2Q8NEG5 633 aa13.75□□□□□ -0.21
CD44-203ENST00000278386 BPIFB1Q8TDL5 484 aa13.75□□□□□ -0.21
CD44-203ENST00000278386 NELL1Q92832 810 aa13.75□□□□□ -0.21
CD44-203ENST00000278386 SMG9Q9H0W8 520 aaKnown RBP13.75□□□□□ -0.21
CD44-203ENST00000278386 TASP1Q9H6P5 420 aa13.75□□□□□ -0.21
CD44-203ENST00000278386 OLFML3Q9NRN5 406 aa13.75□□□□□ -0.21
CD44-203ENST00000278386 OBP2AQ9NY56 170 aa13.75□□□□□ -0.21
CD44-203ENST00000278386 GTSE1Q9NYZ3 720 aa13.75□□□□□ -0.21
CD44-203ENST00000278386 USP18Q9UMW8 372 aa13.75□□□□□ -0.21
CD44-203ENST00000278386 AGAP1Q9UPQ3 857 aa13.75□□□□□ -0.21
CD44-203ENST00000278386 PCDHB5Q9Y5E4 795 aa13.75□□□□□ -0.21
CD44-203ENST00000278386 PCDHB13Q9Y5F0 798 aa13.75□□□□□ -0.21
CD44-203ENST00000278386 GPR179Q6PRD1 2367 aa13.75□□□□□ -0.21
CD44-203ENST00000278386 ATG2BQ96BY7 2078 aa13.75□□□□□ -0.21
CD44-203ENST00000278386 GOLGA8IPA6NC78 632 aa13.74□□□□□ -0.21
CD44-203ENST00000278386 GOLGA8JA6NMD2 632 aa13.74□□□□□ -0.21
CD44-203ENST00000278386 HUS1O60921 280 aa13.74□□□□□ -0.21
CD44-203ENST00000278386 PRPF40AO75400 957 aaKnown RBP13.74□□□□□ -0.21
CD44-203ENST00000278386 KRT19P08727 400 aa13.74□□□□□ -0.21
CD44-203ENST00000278386 TMEM191BP0C7N4 346 aa13.74□□□□□ -0.21
CD44-203ENST00000278386 HAPLN1P10915 354 aaPredicted RBP13.74□□□□□ -0.21
CD44-203ENST00000278386 TDGF1P13385 188 aa13.74□□□□□ -0.21
CD44-203ENST00000278386 GARTP22102 1010 aa13.74□□□□□ -0.21
CD44-203ENST00000278386 AVPR1AP37288 418 aa13.74□□□□□ -0.21
CD44-203ENST00000278386 CXCL12P48061 93 aa13.74□□□□□ -0.21
CD44-203ENST00000278386 WNT7BP56706 349 aa13.74□□□□□ -0.21
CD44-203ENST00000278386 PLCB2Q00722 1185 aa13.74□□□□□ -0.21
CD44-203ENST00000278386 PUM1Q14671 1186 aaKnown RBP eCLIP13.74□□□□□ -0.21
CD44-203ENST00000278386 PON2Q15165 354 aa13.74□□□□□ -0.21
CD44-203ENST00000278386 TXNDC11Q6PKC3 985 aa13.74□□□□□ -0.21
CD44-203ENST00000278386 Q6ZS52 159 aa13.74□□□□□ -0.21
CD44-203ENST00000278386 LRRTM3Q86VH5 581 aa13.74□□□□□ -0.21
CD44-203ENST00000278386 RALGPS2Q86X27 583 aaPredicted RBP13.74□□□□□ -0.21
CD44-203ENST00000278386 PDCL2Q8N4E4 241 aa13.74□□□□□ -0.21
CD44-203ENST00000278386 PDILTQ8N807 584 aa13.74□□□□□ -0.21
CD44-203ENST00000278386 C1orf127Q8N9H9 656 aa13.74□□□□□ -0.21
CD44-203ENST00000278386 STKLD1Q8NE28 680 aa13.74□□□□□ -0.21
CD44-203ENST00000278386 CACTINQ8WUQ7 758 aaKnown RBP13.74□□□□□ -0.21
CD44-203ENST00000278386 USP28Q96RU2 1077 aa13.74□□□□□ -0.21
CD44-203ENST00000278386 CBWD1Q9BRT8 395 aa13.74□□□□□ -0.21
CD44-203ENST00000278386 PI4K2AQ9BTU6 479 aa13.74□□□□□ -0.21
CD44-203ENST00000278386 STRA6Q9BX79 667 aa13.74□□□□□ -0.21
CD44-203ENST00000278386 FGFBP2Q9BYJ0 223 aa13.74□□□□□ -0.21
CD44-203ENST00000278386 PANK2Q9BZ23 570 aa13.74□□□□□ -0.21
CD44-203ENST00000278386 PCIF1Q9H4Z3 704 aa13.74□□□□□ -0.21
CD44-203ENST00000278386 IL21Q9HBE4 155 aa13.74□□□□□ -0.21
CD44-203ENST00000278386 PANK4Q9NVE7 773 aa13.74□□□□□ -0.21
CD44-203ENST00000278386 THG1LQ9NWX6 298 aaKnown RBP13.74□□□□□ -0.21
CD44-203ENST00000278386 L1RE1Q9UN81 338 aa13.74□□□□□ -0.21
CD44-203ENST00000278386 MAGED2Q9UNF1 606 aaPredicted RBP13.74□□□□□ -0.21
CD44-203ENST00000278386 CEP250Q9BV73 2442 aa13.74□□□□□ -0.21
CD44-203ENST00000278386 MYO16Q9Y6X6 1858 aa13.74□□□□□ -0.21
CD44-203ENST00000278386 A0A087X0B3 334 aa13.73□□□□□ -0.21
CD44-203ENST00000278386 MYBPHLA2RUH7 354 aa13.73□□□□□ -0.21
CD44-203ENST00000278386 EXTL3O43909 919 aa13.73□□□□□ -0.21
CD44-203ENST00000278386 ACAT1P24752 427 aaKnown RBP13.73□□□□□ -0.21
CD44-203ENST00000278386 GPR15P49685 360 aa13.73□□□□□ -0.21
CD44-203ENST00000278386 MLLT6P55198 1093 aaPredicted RBP13.73□□□□□ -0.21
CD44-203ENST00000278386 MYL7Q01449 175 aa13.73□□□□□ -0.21
CD44-203ENST00000278386 TNK2Q07912 1038 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms