RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 1 (best) BASIC

Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 GCNT3O95395 438 aa10.92□□□□□ -0.66
UPF3B-201ENST00000276201 FAM86B2P0C5J1 330 aa10.92□□□□□ -0.66
UPF3B-201ENST00000276201 SYN1P17600 705 aa10.92□□□□□ -0.66
UPF3B-201ENST00000276201 IBSPP21815 317 aaPredicted RBP10.92□□□□□ -0.66
UPF3B-201ENST00000276201 IVDP26440 423 aa10.92□□□□□ -0.66
UPF3B-201ENST00000276201 POLGP54098 1239 aaPredicted RBP10.92□□□□□ -0.66
UPF3B-201ENST00000276201 RWDD2BP57060 319 aa10.92□□□□□ -0.66
UPF3B-201ENST00000276201 SARNPP82979 210 aaKnown RBP10.92□□□□□ -0.66
UPF3B-201ENST00000276201 MYL7Q01449 175 aa10.92□□□□□ -0.66
UPF3B-201ENST00000276201 ITGA7Q13683 1181 aa10.92□□□□□ -0.66
UPF3B-201ENST00000276201 METTL7BQ6UX53 244 aa10.92□□□□□ -0.66
UPF3B-201ENST00000276201 ANKRD33Q7Z3H0 272 aa10.92□□□□□ -0.66
UPF3B-201ENST00000276201 ECHDC2Q86YB7 292 aa10.92□□□□□ -0.66
UPF3B-201ENST00000276201 MFN1Q8IWA4 741 aa10.92□□□□□ -0.66
UPF3B-201ENST00000276201 C12orf56Q8IXR9 622 aa10.92□□□□□ -0.66
UPF3B-201ENST00000276201 LMNTD2Q8IXW0 634 aa10.92□□□□□ -0.66
UPF3B-201ENST00000276201 CCDC105Q8IYK2 499 aa10.92□□□□□ -0.66
UPF3B-201ENST00000276201 PRCCQ92733 491 aaPredicted RBP10.92□□□□□ -0.66
UPF3B-201ENST00000276201 KRT35Q92764 455 aa10.92□□□□□ -0.66
UPF3B-201ENST00000276201 UTP4Q969X6 686 aaKnown RBP10.92□□□□□ -0.66
UPF3B-201ENST00000276201 LENG9Q96B70 501 aa10.92□□□□□ -0.66
UPF3B-201ENST00000276201 SNF8Q96H20 258 aa10.92□□□□□ -0.66
UPF3B-201ENST00000276201 CDHR1Q96JP9 859 aa10.92□□□□□ -0.66
UPF3B-201ENST00000276201 SENP7Q9BQF6 1050 aa10.92□□□□□ -0.66
UPF3B-201ENST00000276201 SLC24A3Q9HC58 644 aa10.92□□□□□ -0.66
UPF3B-201ENST00000276201 NKIRAS1Q9NYS0 192 aa10.92□□□□□ -0.66
UPF3B-201ENST00000276201 TAS2R14Q9NYV8 317 aa10.92□□□□□ -0.66
UPF3B-201ENST00000276201 PKD2L1Q9P0L9 805 aa10.92□□□□□ -0.66
UPF3B-201ENST00000276201 CTTNBP2NLQ9P2B4 639 aa10.92□□□□□ -0.66
UPF3B-201ENST00000276201 VAV3Q9UKW4 847 aa10.92□□□□□ -0.66
UPF3B-201ENST00000276201 IGLV3-22A0A075B6J6 115 aa10.92□□□□□ -0.66
UPF3B-201ENST00000276201 ANKRD63C9JTQ0 380 aa10.92□□□□□ -0.66
UPF3B-201ENST00000276201 MEIS1O00470 390 aa10.92□□□□□ -0.66
UPF3B-201ENST00000276201 PRPF4O43172 522 aaKnown RBP eCLIP10.92□□□□□ -0.66
UPF3B-201ENST00000276201 DCTN3O75935 186 aa10.92□□□□□ -0.66
UPF3B-201ENST00000276201 ZNF286BP0CG31 522 aa10.92□□□□□ -0.66
UPF3B-201ENST00000276201 ARP10275 920 aa10.92□□□□□ -0.66
UPF3B-201ENST00000276201 ABCB4P21439 1286 aa10.92□□□□□ -0.66
UPF3B-201ENST00000276201 COMTP21964 271 aa10.92□□□□□ -0.66
UPF3B-201ENST00000276201 RASSF2P50749 326 aa10.92□□□□□ -0.66
UPF3B-201ENST00000276201 IL9RQ01113 521 aa10.92□□□□□ -0.66
UPF3B-201ENST00000276201 MGAT5Q09328 741 aa10.92□□□□□ -0.66
UPF3B-201ENST00000276201 DGKDQ16760 1214 aa10.92□□□□□ -0.66
UPF3B-201ENST00000276201 UBAP2Q5T6F2 1119 aaKnown RBP10.92□□□□□ -0.66
UPF3B-201ENST00000276201 NIPA1Q7RTP0 329 aa10.92□□□□□ -0.66
UPF3B-201ENST00000276201 PPP1R13LQ8WUF5 828 aa10.92□□□□□ -0.66
UPF3B-201ENST00000276201 PSPC1Q8WXF1 523 aaKnown RBP10.92□□□□□ -0.66
UPF3B-201ENST00000276201 RMDN2Q96LZ7 410 aa10.92□□□□□ -0.66
UPF3B-201ENST00000276201 CCDC77Q9BR77 488 aa10.92□□□□□ -0.66
UPF3B-201ENST00000276201 STRA6Q9BX79 667 aa10.92□□□□□ -0.66
UPF3B-201ENST00000276201 ZHX3Q9H4I2 956 aa10.92□□□□□ -0.66
UPF3B-201ENST00000276201 PDLIM7Q9NR12 457 aa10.92□□□□□ -0.66
UPF3B-201ENST00000276201 KCNH7Q9NS40 1196 aa10.92□□□□□ -0.66
UPF3B-201ENST00000276201 FRMD4BQ9Y2L6 1034 aa10.92□□□□□ -0.66
UPF3B-201ENST00000276201 PCDHB13Q9Y5F0 798 aa10.92□□□□□ -0.66
UPF3B-201ENST00000276201 SMIM23A6NLE4 172 aa10.91□□□□□ -0.66
UPF3B-201ENST00000276201 FTLP02792 175 aaPredicted RBP10.91□□□□□ -0.66
UPF3B-201ENST00000276201 PYGMP11217 842 aa10.91□□□□□ -0.66
UPF3B-201ENST00000276201 BRAFP15056 766 aa10.91□□□□□ -0.66
UPF3B-201ENST00000276201 STX2P32856 288 aa10.91□□□□□ -0.66
UPF3B-201ENST00000276201 CENPCQ03188 943 aa10.91□□□□□ -0.66
UPF3B-201ENST00000276201 PTP4A2Q12974 167 aa10.91□□□□□ -0.66
UPF3B-201ENST00000276201 SETDB1Q15047 1291 aa10.91□□□□□ -0.66
UPF3B-201ENST00000276201 RINT1Q6NUQ1 792 aa10.91□□□□□ -0.66
UPF3B-201ENST00000276201 C1orf186Q6ZWK4 172 aa10.91□□□□□ -0.66
UPF3B-201ENST00000276201 HS2ST1Q7LGA3 356 aa10.91□□□□□ -0.66
UPF3B-201ENST00000276201 ASAP3Q8TDY4 903 aa10.91□□□□□ -0.66
UPF3B-201ENST00000276201 MICAL1Q8TDZ2 1067 aa10.91□□□□□ -0.66
UPF3B-201ENST00000276201 PIGOQ8TEQ8 1089 aa10.91□□□□□ -0.66
UPF3B-201ENST00000276201 TOX2Q96NM4 488 aa10.91□□□□□ -0.66
UPF3B-201ENST00000276201 FIZ1Q96SL8 496 aa10.91□□□□□ -0.66
UPF3B-201ENST00000276201 RUSC1Q9BVN2 902 aa10.91□□□□□ -0.66
UPF3B-201ENST00000276201 SAR1AQ9NR31 198 aa10.91□□□□□ -0.66
UPF3B-201ENST00000276201 SENP1Q9P0U3 644 aa10.91□□□□□ -0.66
UPF3B-201ENST00000276201 LNPEPQ9UIQ6 1025 aa10.91□□□□□ -0.66
UPF3B-201ENST00000276201 GTF3C4Q9UKN8 822 aa10.91□□□□□ -0.66
UPF3B-201ENST00000276201 ASB3Q9Y575 518 aa10.91□□□□□ -0.66
UPF3B-201ENST00000276201 A8MUI8 341 aa10.91□□□□□ -0.66
UPF3B-201ENST00000276201 MAFGO15525 162 aa10.91□□□□□ -0.66
UPF3B-201ENST00000276201 TPBGLP0DKB5 382 aa10.91□□□□□ -0.66
UPF3B-201ENST00000276201 MAPTP10636 758 aaKnown RBP10.91□□□□□ -0.66
UPF3B-201ENST00000276201 NEFHP12036 1026 aa10.91□□□□□ -0.66
UPF3B-201ENST00000276201 ZNF76P36508 570 aa10.91□□□□□ -0.66
UPF3B-201ENST00000276201 SLCO1A2P46721 670 aa10.91□□□□□ -0.66
UPF3B-201ENST00000276201 SP4Q02446 784 aa10.91□□□□□ -0.66
UPF3B-201ENST00000276201 FAAP100Q0VG06 881 aa10.91□□□□□ -0.66
UPF3B-201ENST00000276201 BFSP1Q12934 665 aa10.91□□□□□ -0.66
UPF3B-201ENST00000276201 ALCAMQ13740 583 aa10.91□□□□□ -0.66
UPF3B-201ENST00000276201 MPP2Q14168 576 aa10.91□□□□□ -0.66
UPF3B-201ENST00000276201 LONRF1Q17RB8 773 aa10.91□□□□□ -0.66
UPF3B-201ENST00000276201 NBPF20Q3BBV1 942 aa10.91□□□□□ -0.66
UPF3B-201ENST00000276201 CBWD6Q4V339 395 aa10.91□□□□□ -0.66
UPF3B-201ENST00000276201 CBWD3Q5JTY5 395 aa10.91□□□□□ -0.66
UPF3B-201ENST00000276201 CBWD5Q5RIA9 395 aa10.91□□□□□ -0.66
UPF3B-201ENST00000276201 FAM126BQ8IXS8 530 aa10.91□□□□□ -0.66
UPF3B-201ENST00000276201 KIRREL3Q8IZU9 778 aa10.91□□□□□ -0.66
UPF3B-201ENST00000276201 GPR20Q99678 358 aa10.91□□□□□ -0.66
UPF3B-201ENST00000276201 TRAIPQ9BWF2 469 aa10.91□□□□□ -0.66
UPF3B-201ENST00000276201 OSBPL1AQ9BXW6 950 aa10.91□□□□□ -0.66
UPF3B-201ENST00000276201 KIF9Q9HAQ2 790 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms