RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 ALDH1B1P30837 517 aa13.49□□□□□ -0.25
HERC6-202ENST00000273960 PPP6R3Q5H9R7 873 aaPredicted RBP13.49□□□□□ -0.25
HERC6-202ENST00000273960 APLFQ8IW19 511 aaPredicted RBP13.49□□□□□ -0.25
HERC6-202ENST00000273960 RBM12BQ8IXT5 1001 aaKnown RBP13.49□□□□□ -0.25
HERC6-202ENST00000273960 DENND1AQ8TEH3 1009 aa13.49□□□□□ -0.25
HERC6-202ENST00000273960 ACAP3Q96P50 834 aa13.49□□□□□ -0.25
HERC6-202ENST00000273960 SLC7A8Q9UHI5 535 aa13.49□□□□□ -0.25
HERC6-202ENST00000273960 A0A0J9YVX5 310 aa13.48□□□□□ -0.25
HERC6-202ENST00000273960 DCAF8L1A6NGE4 600 aa13.48□□□□□ -0.25
HERC6-202ENST00000273960 LRRC8BQ6P9F7 803 aa13.48□□□□□ -0.25
HERC6-202ENST00000273960 ZCCHC23Q6ZST2 131 aa13.48□□□□□ -0.25
HERC6-202ENST00000273960 RNF168Q8IYW5 571 aaPredicted RBP13.48□□□□□ -0.25
HERC6-202ENST00000273960 PTCD3Q96EY7 689 aaKnown RBP13.48□□□□□ -0.25
HERC6-202ENST00000273960 CNBD2Q96M20 576 aa13.48□□□□□ -0.25
HERC6-202ENST00000273960 LZTS2Q9BRK4 669 aa13.48□□□□□ -0.25
HERC6-202ENST00000273960 PI4K2AQ9BTU6 479 aa13.48□□□□□ -0.25
HERC6-202ENST00000273960 OSBPL8Q9BZF1 889 aa13.48□□□□□ -0.25
HERC6-202ENST00000273960 PEX1O43933 1283 aa13.48□□□□□ -0.25
HERC6-202ENST00000273960 TMCC1O94876 653 aa13.48□□□□□ -0.25
HERC6-202ENST00000273960 TFPTP0C1Z6 253 aa13.48□□□□□ -0.25
HERC6-202ENST00000273960 POTEJP0CG39 1038 aa13.48□□□□□ -0.25
HERC6-202ENST00000273960 PPP3CAQ08209 521 aa13.48□□□□□ -0.25
HERC6-202ENST00000273960 RALGPS1Q5JS13 557 aa13.48□□□□□ -0.25
HERC6-202ENST00000273960 CTAGE3PQ8IX95 158 aa13.48□□□□□ -0.25
HERC6-202ENST00000273960 ULK2Q8IYT8 1036 aa13.48□□□□□ -0.25
HERC6-202ENST00000273960 OR6Y1Q8NGX8 325 aa13.48□□□□□ -0.25
HERC6-202ENST00000273960 OXNAD1Q96HP4 312 aaPredicted RBP13.48□□□□□ -0.25
HERC6-202ENST00000273960 PLVAPQ9BX97 442 aa13.48□□□□□ -0.25
HERC6-202ENST00000273960 LRRC19Q9H756 370 aa13.48□□□□□ -0.25
HERC6-202ENST00000273960 JMJD4Q9H9V9 463 aa13.48□□□□□ -0.25
HERC6-202ENST00000273960 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.48□□□□□ -0.25
HERC6-202ENST00000273960 CAPN8A6NHC0 703 aa13.48□□□□□ -0.25
HERC6-202ENST00000273960 SGK1O00141 431 aa13.48□□□□□ -0.25
HERC6-202ENST00000273960 STAMBPO95630 424 aa13.48□□□□□ -0.25
HERC6-202ENST00000273960 PSMD7P51665 324 aa13.48□□□□□ -0.25
HERC6-202ENST00000273960 NRLP54845 237 aa13.48□□□□□ -0.25
HERC6-202ENST00000273960 GK3PQ14409 553 aa13.48□□□□□ -0.25
HERC6-202ENST00000273960 C11orf63Q6NUN7 778 aa13.48□□□□□ -0.25
HERC6-202ENST00000273960 SMC1BQ8NDV3 1235 aa13.48□□□□□ -0.25
HERC6-202ENST00000273960 TMCO1Q9UM00 188 aa13.48□□□□□ -0.25
HERC6-202ENST00000273960 PCDHA1Q9Y5I3 950 aa13.48□□□□□ -0.25
HERC6-202ENST00000273960 TIAM2Q8IVF5 1701 aa13.48□□□□□ -0.25
HERC6-202ENST00000273960 LPXNO60711 386 aa13.47□□□□□ -0.25
HERC6-202ENST00000273960 CRKP46108 304 aa13.47□□□□□ -0.25
HERC6-202ENST00000273960 GALNT4Q8N4A0 578 aa13.47□□□□□ -0.25
HERC6-202ENST00000273960 GDPD5Q8WTR4 605 aa13.47□□□□□ -0.25
HERC6-202ENST00000273960 OLFM3Q96PB7 478 aa13.47□□□□□ -0.25
HERC6-202ENST00000273960 IQCGQ9H095 443 aaKnown RBP13.47□□□□□ -0.25
HERC6-202ENST00000273960 SAR1AQ9NR31 198 aa13.47□□□□□ -0.25
HERC6-202ENST00000273960 DNPEPQ9ULA0 475 aa13.47□□□□□ -0.25
HERC6-202ENST00000273960 EML1O00423 815 aa13.47□□□□□ -0.25
HERC6-202ENST00000273960 CYTH1Q15438 398 aa13.47□□□□□ -0.25
HERC6-202ENST00000273960 CDC42EP5Q6NZY7 148 aa13.47□□□□□ -0.25
HERC6-202ENST00000273960 ANKS1BQ7Z6G8 1248 aa13.47□□□□□ -0.25
HERC6-202ENST00000273960 ARHGAP24Q8N264 748 aa13.47□□□□□ -0.25
HERC6-202ENST00000273960 RAB3IL1Q8TBN0 382 aa13.47□□□□□ -0.25
HERC6-202ENST00000273960 PPP2R3CQ969Q6 453 aa13.47□□□□□ -0.25
HERC6-202ENST00000273960 COA1Q9GZY4 146 aa13.47□□□□□ -0.25
HERC6-202ENST00000273960 LGALS13Q9UHV8 139 aa13.47□□□□□ -0.25
HERC6-202ENST00000273960 FAF1Q9UNN5 650 aaPredicted RBP13.47□□□□□ -0.25
HERC6-202ENST00000273960 NPR1P16066 1061 aa13.47□□□□□ -0.25
HERC6-202ENST00000273960 MAGEA8P43361 318 aa13.47□□□□□ -0.25
HERC6-202ENST00000273960 CDK16Q00536 496 aa13.47□□□□□ -0.25
HERC6-202ENST00000273960 PDK3Q15120 406 aa13.47□□□□□ -0.25
HERC6-202ENST00000273960 C3orf62Q6ZUJ4 267 aa13.47□□□□□ -0.25
HERC6-202ENST00000273960 CCDC89Q8N998 374 aa13.47□□□□□ -0.25
HERC6-202ENST00000273960 NEDD1Q8NHV4 660 aa13.47□□□□□ -0.25
HERC6-202ENST00000273960 GSDMBQ8TAX9 411 aa13.47□□□□□ -0.25
HERC6-202ENST00000273960 AZIN2Q96A70 460 aa13.47□□□□□ -0.25
HERC6-202ENST00000273960 FAM163AQ96GL9 167 aaPredicted RBP13.47□□□□□ -0.25
HERC6-202ENST00000273960 TMEM121Q9BTD3 319 aa13.47□□□□□ -0.25
HERC6-202ENST00000273960 ANLNQ9NQW6 1124 aa13.47□□□□□ -0.25
HERC6-202ENST00000273960 AHDC1Q5TGY3 1603 aaPredicted RBP13.46□□□□□ -0.25
HERC6-202ENST00000273960 CICQ96RK0 1608 aaPredicted RBP13.46□□□□□ -0.25
HERC6-202ENST00000273960 PRR5-ARHGAP8B1AHC4 643 aa13.46□□□□□ -0.25
HERC6-202ENST00000273960 SPECC1L-ADORA2AF8WAN1 911 aa13.46□□□□□ -0.25
HERC6-202ENST00000273960 FAM155BO75949 473 aa13.46□□□□□ -0.25
HERC6-202ENST00000273960 MT-ND3P03897 115 aa13.46□□□□□ -0.25
HERC6-202ENST00000273960 RHBDL3P58872 404 aa13.46□□□□□ -0.25
HERC6-202ENST00000273960 HPCAP84074 193 aa13.46□□□□□ -0.25
HERC6-202ENST00000273960 ARHGAP8P85298 464 aa13.46□□□□□ -0.25
HERC6-202ENST00000273960 TMPRSS15P98073 1019 aa13.46□□□□□ -0.25
HERC6-202ENST00000273960 ZNF200P98182 395 aaPredicted RBP13.46□□□□□ -0.25
HERC6-202ENST00000273960 PTK6Q13882 451 aa13.46□□□□□ -0.25
HERC6-202ENST00000273960 SLC27A3Q5K4L6 730 aa13.46□□□□□ -0.25
HERC6-202ENST00000273960 MFSD4BQ5TF39 518 aa13.46□□□□□ -0.25
HERC6-202ENST00000273960 RINT1Q6NUQ1 792 aa13.46□□□□□ -0.25
HERC6-202ENST00000273960 RSPH3Q86UC2 560 aa13.46□□□□□ -0.25
HERC6-202ENST00000273960 RHPN2Q8IUC4 686 aa13.46□□□□□ -0.25
HERC6-202ENST00000273960 SP8Q8IXZ3 490 aa13.46□□□□□ -0.25
HERC6-202ENST00000273960 GRK7Q8WTQ7 553 aa13.46□□□□□ -0.25
HERC6-202ENST00000273960 NR1H4Q96RI1 486 aaPredicted RBP13.46□□□□□ -0.25
HERC6-202ENST00000273960 TOPORSQ9NS56 1045 aaPredicted RBP13.46□□□□□ -0.25
HERC6-202ENST00000273960 ZNF180Q9UJW8 692 aa13.46□□□□□ -0.25
HERC6-202ENST00000273960 SMG5Q9UPR3 1016 aaKnown RBP13.46□□□□□ -0.25
HERC6-202ENST00000273960 ZNF510Q9Y2H8 683 aa13.46□□□□□ -0.25
HERC6-202ENST00000273960 PLCH1Q4KWH8 1693 aa13.46□□□□□ -0.25
HERC6-202ENST00000273960 FRMPD4Q14CM0 1322 aa13.46□□□□□ -0.25
HERC6-202ENST00000273960 MROH7Q68CQ1 1323 aa13.46□□□□□ -0.25
HERC6-202ENST00000273960 PAPPAQ13219 1627 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms