RNA–Protein interactions for RNA: ENST00000273286.5

LRTM1-201, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRTM1, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-201ENST00000273286 THAP5Q7Z6K1 395 aa10.81□□□□□ -0.68
LRTM1-201ENST00000273286 UBALD2Q8IYN6 164 aa10.81□□□□□ -0.68
LRTM1-201ENST00000273286 TMEM87AQ8NBN3 555 aa10.81□□□□□ -0.68
LRTM1-201ENST00000273286 DAGLBQ8NCG7 672 aa10.81□□□□□ -0.68
LRTM1-201ENST00000273286 RNF169Q8NCN4 708 aa10.81□□□□□ -0.68
LRTM1-201ENST00000273286 VN1R2Q8NFZ6 395 aa10.81□□□□□ -0.68
LRTM1-201ENST00000273286 ZNF274Q96GC6 653 aaPredicted RBP10.81□□□□□ -0.68
LRTM1-201ENST00000273286 RIPOR3Q96MK2 946 aa10.81□□□□□ -0.68
LRTM1-201ENST00000273286 NAP1L4Q99733 375 aaKnown RBP10.81□□□□□ -0.68
LRTM1-201ENST00000273286 ADAM7Q9H2U9 754 aa10.81□□□□□ -0.68
LRTM1-201ENST00000273286 VPS54Q9P1Q0 977 aa10.81□□□□□ -0.68
LRTM1-201ENST00000273286 HCFC2Q9Y5Z7 792 aa10.81□□□□□ -0.68
LRTM1-201ENST00000273286 CACNA1HO95180 2353 aa10.81□□□□□ -0.68
LRTM1-201ENST00000273286 WDFY4Q6ZS81 3184 aa10.8□□□□□ -0.68
LRTM1-201ENST00000273286 ZNF623O75123 536 aa10.8□□□□□ -0.68
LRTM1-201ENST00000273286 CPA1P15085 419 aa10.8□□□□□ -0.68
LRTM1-201ENST00000273286 XBP1P17861 261 aa10.8□□□□□ -0.68
LRTM1-201ENST00000273286 AFMP43652 599 aa10.8□□□□□ -0.68
LRTM1-201ENST00000273286 PSMC5P62195 406 aa10.8□□□□□ -0.68
LRTM1-201ENST00000273286 TNK2Q07912 1038 aa10.8□□□□□ -0.68
LRTM1-201ENST00000273286 NONOQ15233 471 aaKnown RBP eCLIP10.8□□□□□ -0.68
LRTM1-201ENST00000273286 ZNF124Q15973 351 aa10.8□□□□□ -0.68
LRTM1-201ENST00000273286 CLLU1OSQ5K130 101 aa10.8□□□□□ -0.68
LRTM1-201ENST00000273286 TWF2Q6IBS0 349 aaKnown RBP10.8□□□□□ -0.68
LRTM1-201ENST00000273286 SYCE2Q6PIF2 218 aa10.8□□□□□ -0.68
LRTM1-201ENST00000273286 B3GNT9Q6UX72 402 aa10.8□□□□□ -0.68
LRTM1-201ENST00000273286 RUFY3Q7L099 469 aa10.8□□□□□ -0.68
LRTM1-201ENST00000273286 PPFIBP1Q86W92 1011 aa10.8□□□□□ -0.68
LRTM1-201ENST00000273286 BLIDQ8IZY5 108 aa10.8□□□□□ -0.68
LRTM1-201ENST00000273286 UBE2FQ969M7 185 aa10.8□□□□□ -0.68
LRTM1-201ENST00000273286 ACSF2Q96CM8 615 aaPredicted RBP10.8□□□□□ -0.68
LRTM1-201ENST00000273286 PGBD4Q96DM1 585 aa10.8□□□□□ -0.68
LRTM1-201ENST00000273286 UNC45AQ9H3U1 944 aa10.8□□□□□ -0.68
LRTM1-201ENST00000273286 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.8□□□□□ -0.68
LRTM1-201ENST00000273286 ADAM30Q9UKF2 790 aa10.8□□□□□ -0.68
LRTM1-201ENST00000273286 SORCS3Q9UPU3 1222 aa10.8□□□□□ -0.68
LRTM1-201ENST00000273286 C2orf71A6NGG8 1288 aa10.79□□□□□ -0.68
LRTM1-201ENST00000273286 LRRC10BA6NIK2 292 aa10.79□□□□□ -0.68
LRTM1-201ENST00000273286 HIDE1A8MVS5 230 aa10.79□□□□□ -0.68
LRTM1-201ENST00000273286 MAFO75444 373 aaPredicted RBP10.79□□□□□ -0.68
LRTM1-201ENST00000273286 CDKL5O76039 1030 aa10.79□□□□□ -0.68
LRTM1-201ENST00000273286 GCFC2P16383 781 aaKnown RBP10.79□□□□□ -0.68
LRTM1-201ENST00000273286 ETV3P41162 512 aa10.79□□□□□ -0.68
LRTM1-201ENST00000273286 BCAR1P56945 870 aa10.79□□□□□ -0.68
LRTM1-201ENST00000273286 CCT2P78371 535 aaKnown RBP10.79□□□□□ -0.68
LRTM1-201ENST00000273286 PCBP1Q15365 356 aaKnown RBP eCLIP10.79□□□□□ -0.68
LRTM1-201ENST00000273286 UGCGQ16739 394 aa10.79□□□□□ -0.68
LRTM1-201ENST00000273286 MTERF2Q49AM1 385 aa10.79□□□□□ -0.68
LRTM1-201ENST00000273286 FYB2Q5VWT5 728 aa10.79□□□□□ -0.68
LRTM1-201ENST00000273286 MCATQ8IVS2 390 aaKnown RBP10.79□□□□□ -0.68
LRTM1-201ENST00000273286 FAM20AQ96MK3 541 aa10.79□□□□□ -0.68
LRTM1-201ENST00000273286 MBOAT7Q96N66 472 aa10.79□□□□□ -0.68
LRTM1-201ENST00000273286 TM6SF1Q9BZW5 370 aa10.79□□□□□ -0.68
LRTM1-201ENST00000273286 PIN4Q9Y237 131 aaKnown RBP10.79□□□□□ -0.68
LRTM1-201ENST00000273286 CORINQ9Y5Q5 1042 aa10.79□□□□□ -0.68
LRTM1-201ENST00000273286 CYP46A1Q9Y6A2 500 aa10.79□□□□□ -0.68
LRTM1-201ENST00000273286 A0A087WZ62 844 aa10.78□□□□□ -0.68
LRTM1-201ENST00000273286 ADAMTS3O15072 1205 aa10.78□□□□□ -0.68
LRTM1-201ENST00000273286 TBX3O15119 743 aa10.78□□□□□ -0.68
LRTM1-201ENST00000273286 ZC3H11AO75152 810 aaKnown RBP eCLIP10.78□□□□□ -0.68
LRTM1-201ENST00000273286 RBM10P98175 930 aaKnown RBP10.78□□□□□ -0.68
LRTM1-201ENST00000273286 RNASELQ05823 741 aaKnown RBP10.78□□□□□ -0.68
LRTM1-201ENST00000273286 ATAT1Q5SQI0 421 aa10.78□□□□□ -0.68
LRTM1-201ENST00000273286 PPP4R3AQ6IN85 833 aa10.78□□□□□ -0.68
LRTM1-201ENST00000273286 CATSPER4Q7RTX7 472 aa10.78□□□□□ -0.68
LRTM1-201ENST00000273286 SRGAP1Q7Z6B7 1085 aa10.78□□□□□ -0.68
LRTM1-201ENST00000273286 DDX53Q86TM3 631 aaKnown RBP10.78□□□□□ -0.68
LRTM1-201ENST00000273286 VPS52Q8N1B4 723 aa10.78□□□□□ -0.68
LRTM1-201ENST00000273286 CNNM3Q8NE01 707 aa10.78□□□□□ -0.68
LRTM1-201ENST00000273286 ETNPPLQ8TBG4 499 aa10.78□□□□□ -0.68
LRTM1-201ENST00000273286 URGCPQ8TCY9 931 aa10.78□□□□□ -0.68
LRTM1-201ENST00000273286 CRELD1Q96HD1 420 aa10.78□□□□□ -0.68
LRTM1-201ENST00000273286 CEP89Q96ST8 783 aa10.78□□□□□ -0.68
LRTM1-201ENST00000273286 FDXACB1Q9BRP7 624 aaPredicted RBP10.78□□□□□ -0.68
LRTM1-201ENST00000273286 ZBP1Q9H171 429 aa10.78□□□□□ -0.68
LRTM1-201ENST00000273286 UBN1Q9NPG3 1134 aa10.78□□□□□ -0.68
LRTM1-201ENST00000273286 C19orf73Q9NVV2 129 aa10.78□□□□□ -0.68
LRTM1-201ENST00000273286 SUCLA2Q9P2R7 463 aaPredicted RBP10.78□□□□□ -0.68
LRTM1-201ENST00000273286 DDX25Q9UHL0 483 aaKnown RBP10.78□□□□□ -0.68
LRTM1-201ENST00000273286 DPP7Q9UHL4 492 aa10.78□□□□□ -0.68
LRTM1-201ENST00000273286 CNTNAP2Q9UHC6 1331 aa10.78□□□□□ -0.68
LRTM1-201ENST00000273286 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.77□□□□□ -0.68
LRTM1-201ENST00000273286 ZNF503-AS2A6NEH8 195 aa10.77□□□□□ -0.68
LRTM1-201ENST00000273286 ASAP2O43150 1006 aa10.77□□□□□ -0.68
LRTM1-201ENST00000273286 TDP2O95551 362 aa10.77□□□□□ -0.68
LRTM1-201ENST00000273286 CXCL14O95715 111 aa10.77□□□□□ -0.68
LRTM1-201ENST00000273286 CTSAP10619 480 aa10.77□□□□□ -0.68
LRTM1-201ENST00000273286 AVPR2P30518 371 aa10.77□□□□□ -0.68
LRTM1-201ENST00000273286 CA8P35219 290 aa10.77□□□□□ -0.68
LRTM1-201ENST00000273286 PBX3P40426 434 aa10.77□□□□□ -0.68
LRTM1-201ENST00000273286 QARSP47897 775 aaKnown RBP10.77□□□□□ -0.68
LRTM1-201ENST00000273286 PPP2R5CQ13362 524 aa10.77□□□□□ -0.68
LRTM1-201ENST00000273286 NOMO2Q5JPE7 1267 aa10.77□□□□□ -0.68
LRTM1-201ENST00000273286 KIAA1841Q6NSI8 718 aa10.77□□□□□ -0.68
LRTM1-201ENST00000273286 BNC2Q6ZN30 1099 aaPredicted RBP10.77□□□□□ -0.68
LRTM1-201ENST00000273286 OTUD6AQ7L8S5 288 aa10.77□□□□□ -0.68
LRTM1-201ENST00000273286 RHPN2Q8IUC4 686 aa10.77□□□□□ -0.68
LRTM1-201ENST00000273286 KSR1Q8IVT5 923 aa10.77□□□□□ -0.68
LRTM1-201ENST00000273286 PRSS33Q8NF86 280 aa10.77□□□□□ -0.68
LRTM1-201ENST00000273286 TCP11Q8WWU5 503 aa10.77□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms